RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 PPP1R42Q7Z4L9 355 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 LRRC47Q8N1G4 583 aaKnown RBP8.43□□□□□ -1.06
CCDC60-203ENST00000536742 FIBCD1Q8N539 461 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 BVESQ8NE79 360 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 GRAPLQ8TC17 118 aaPredicted RBP8.43□□□□□ -1.06
CCDC60-203ENST00000536742 TCTN2Q96GX1 697 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 MRFAP1L1Q96HT8 127 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 SRPK1Q96SB4 655 aaKnown RBP8.43□□□□□ -1.06
CCDC60-203ENST00000536742 ATP13A1Q9HD20 1204 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 SNTG2Q9NY99 539 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 PFASO15067 1338 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 LAMB2P55268 1798 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 WDFY4Q6ZS81 3184 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 C5orf42Q9H799 3197 aa8.43□□□□□ -1.06
CCDC60-203ENST00000536742 EPG5Q9HCE0 2579 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 USP2O75604 605 aaPredicted RBP8.42□□□□□ -1.06
CCDC60-203ENST00000536742 CD8BP10966 210 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 ALADP13716 330 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 ITGB5P18084 799 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 FUT4P22083 530 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 PIP4K2AP48426 406 aaPredicted RBP8.42□□□□□ -1.06
CCDC60-203ENST00000536742 KCNQ1P51787 676 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 ACAP1Q15027 740 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 CCDC144BQ3MJ40 725 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 C9orf50Q5SZB4 431 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 SUSD4Q5VX71 490 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 KRTAP1-3Q8IUG1 177 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 ZNF513Q8N8E2 541 aaPredicted RBP8.42□□□□□ -1.06
CCDC60-203ENST00000536742 PI4K2BQ8TCG2 481 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 ZSWIM4Q9H7M6 989 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 POLLQ9UGP5 575 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 CPA4Q9UI42 421 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 OGDHLQ9ULD0 1010 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 GABRQQ9UN88 632 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 USP16Q9Y5T5 823 aa8.42□□□□□ -1.06
CCDC60-203ENST00000536742 PSME4Q14997 1843 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 LRRC37AA6NMS7 1700 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 SSU72P8A0A1W2PR75 194 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 NTSR2O95665 410 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 ESR1P03372 595 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 U2AF1L5P0DN76 240 aaPredicted RBP8.41□□□□□ -1.06
CCDC60-203ENST00000536742 COL6A1P12109 1028 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 FLT3LGP49771 235 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 U2AF1Q01081 240 aaKnown RBP eCLIP8.41□□□□□ -1.06
CCDC60-203ENST00000536742 TFF2Q03403 129 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 LONRF2Q1L5Z9 754 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 LRRC26Q2I0M4 334 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 SV2CQ496J9 727 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 MTERF2Q49AM1 385 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 NOP9Q86U38 636 aaKnown RBP8.41□□□□□ -1.06
CCDC60-203ENST00000536742 CREG2Q8IUH2 290 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 FGD4Q96M96 766 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 NOL6Q9H6R4 1146 aaKnown RBP8.41□□□□□ -1.06
CCDC60-203ENST00000536742 CGGBP1Q9UFW8 167 aaPredicted RBP8.41□□□□□ -1.06
CCDC60-203ENST00000536742 EMC9Q9Y3B6 208 aa8.41□□□□□ -1.06
CCDC60-203ENST00000536742 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.4□□□□□ -1.06
CCDC60-203ENST00000536742 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.4□□□□□ -1.06
CCDC60-203ENST00000536742 BTBD19C9JJ37 291 aa8.4□□□□□ -1.06
CCDC60-203ENST00000536742 ERC2O15083 957 aa8.4□□□□□ -1.06
CCDC60-203ENST00000536742 ID4P47928 161 aa8.4□□□□□ -1.06
CCDC60-203ENST00000536742 TEFQ10587 303 aa8.4□□□□□ -1.06
CCDC60-203ENST00000536742 ZC3H12BQ5HYM0 836 aaKnown RBP8.4□□□□□ -1.06
CCDC60-203ENST00000536742 SULT6B1Q6IMI4 303 aa8.4□□□□□ -1.06
CCDC60-203ENST00000536742 TIFAQ96CG3 184 aa8.4□□□□□ -1.06
CCDC60-203ENST00000536742 CCDC140Q96MF4 163 aa8.4□□□□□ -1.06
CCDC60-203ENST00000536742 LRP2BPQ9P2M1 347 aa8.4□□□□□ -1.06
CCDC60-203ENST00000536742 AKT3Q9Y243 479 aa8.4□□□□□ -1.06
CCDC60-203ENST00000536742 MGAMO43451 1857 aa8.4□□□□□ -1.07
CCDC60-203ENST00000536742 NUP98P52948 1817 aa8.4□□□□□ -1.07
CCDC60-203ENST00000536742 ANKRD36CQ5JPF3 1778 aa8.4□□□□□ -1.07
CCDC60-203ENST00000536742 UBN2Q6ZU65 1347 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 MYO3BQ8WXR4 1341 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 SASH1O94885 1247 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 ZNF205O95201 554 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 CD96P40200 585 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 CTSKP43235 329 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 EGR3Q06889 387 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 PARP10Q53GL7 1025 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 SLC23A3Q6PIS1 610 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 KRTAP19-1Q8IUB9 90 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 TRIM59Q8IWR1 403 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 TBC1D16Q8TBP0 767 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 BRF1Q92994 677 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 RNPC3Q96LT9 517 aaKnown RBP8.39□□□□□ -1.07
CCDC60-203ENST00000536742 PRDM12Q9H4Q4 367 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 RC3H2Q9HBD1 1191 aaKnown RBP8.39□□□□□ -1.07
CCDC60-203ENST00000536742 APEX2Q9UBZ4 518 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 TCFL5Q9UL49 500 aa8.39□□□□□ -1.07
CCDC60-203ENST00000536742 IGSF3O75054 1194 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 VAV1P15498 845 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 GPTP24298 496 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 AMPD2Q01433 879 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 ZP2Q05996 745 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 SNAPC2Q13487 334 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 WFDC3Q8IUB2 231 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 LRRN4CLQ8ND94 238 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 ADCY4Q8NFM4 1077 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 HERVK_113Q902F9 699 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 MRGPRX3Q96LB0 322 aa8.38□□□□□ -1.07
CCDC60-203ENST00000536742 PRRX2Q99811 253 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms