RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 EFCAB12Q6NXP0 572 aa20.08■□□□□ 0.81
TNFRSF1A-209ENST00000536717 LRRC71Q8N4P6 559 aa20.08■□□□□ 0.81
TNFRSF1A-209ENST00000536717 BANK1Q8NDB2 785 aa20.08■□□□□ 0.81
TNFRSF1A-209ENST00000536717 CEP89Q96ST8 783 aa20.08■□□□□ 0.81
TNFRSF1A-209ENST00000536717 PPP1R16BQ96T49 567 aa20.08■□□□□ 0.81
TNFRSF1A-209ENST00000536717 YME1L1Q96TA2 773 aa20.08■□□□□ 0.81
TNFRSF1A-209ENST00000536717 TMX1Q9H3N1 280 aa20.08■□□□□ 0.81
TNFRSF1A-209ENST00000536717 MTUS1Q9ULD2 1270 aa20.08■□□□□ 0.81
TNFRSF1A-209ENST00000536717 MTCH2Q9Y6C9 303 aa20.08■□□□□ 0.81
TNFRSF1A-209ENST00000536717 ATG2AQ2TAZ0 1938 aa20.08■□□□□ 0.8
TNFRSF1A-209ENST00000536717 TMEM150BA6NC51 233 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 GPR32O75388 356 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 GUCY1B3Q02153 619 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 GRB10Q13322 594 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 CCDC85BQ15834 202 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 KIZQ2M2Z5 673 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 FAM184AQ8NB25 1140 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 FTHL17Q9BXU8 183 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 NIFKQ9BYG3 293 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 SUGCTQ9HAC7 445 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 RC3H2Q9HBD1 1191 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 SEPT9Q9UHD8 586 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 SMC3Q9UQE7 1217 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 NOC2LQ9Y3T9 749 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 KIF3AQ9Y496 699 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 HSP90AA1P07900 732 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 SPIRE1Q08AE8 756 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 XKR3Q5GH77 459 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 CRIPAKQ8N1N5 446 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 GDPD5Q8WTR4 605 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 OSMRQ99650 979 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 SH2D3AQ9BRG2 576 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 C17orf80Q9BSJ5 609 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 TSPYL2Q9H2G4 693 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 ERVK-5Q9HDB9 667 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 PRDM6Q9NQX0 595 aa20.07■□□□□ 0.8
TNFRSF1A-209ENST00000536717 RPS6KA5O75582 802 aa20.06■□□□□ 0.8
TNFRSF1A-209ENST00000536717 CRYBB1P53674 252 aaPredicted RBP20.06■□□□□ 0.8
TNFRSF1A-209ENST00000536717 PSMC5P62195 406 aa20.06■□□□□ 0.8
TNFRSF1A-209ENST00000536717 TBC1D8BQ0IIM8 1120 aa20.06■□□□□ 0.8
TNFRSF1A-209ENST00000536717 NFX1Q12986 1120 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1A-209ENST00000536717 MTERF2Q49AM1 385 aa20.06■□□□□ 0.8
TNFRSF1A-209ENST00000536717 INTS4Q96HW7 963 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1A-209ENST00000536717 GTPBP6O43824 516 aaPredicted RBP20.05■□□□□ 0.8
TNFRSF1A-209ENST00000536717 MGEA5O60502 916 aa20.05■□□□□ 0.8
TNFRSF1A-209ENST00000536717 TMOD1P28289 359 aa20.05■□□□□ 0.8
TNFRSF1A-209ENST00000536717 ANP32AP39687 249 aaKnown RBP20.05■□□□□ 0.8
TNFRSF1A-209ENST00000536717 NLRP11P59045 1033 aaKnown RBP20.05■□□□□ 0.8
TNFRSF1A-209ENST00000536717 ANO5Q75V66 913 aa20.05■□□□□ 0.8
TNFRSF1A-209ENST00000536717 SLFN12Q8IYM2 578 aa20.05■□□□□ 0.8
TNFRSF1A-209ENST00000536717 MICALL1Q8N3F8 863 aa20.05■□□□□ 0.8
TNFRSF1A-209ENST00000536717 C8orf76Q96K31 380 aa20.05■□□□□ 0.8
TNFRSF1A-209ENST00000536717 MAP7D2Q96T17 732 aa20.05■□□□□ 0.8
TNFRSF1A-209ENST00000536717 WRAP73Q9P2S5 460 aaPredicted RBP20.05■□□□□ 0.8
TNFRSF1A-209ENST00000536717 AKT3Q9Y243 479 aa20.05■□□□□ 0.8
TNFRSF1A-209ENST00000536717 IGKV6-21A0A0C4DH24 114 aa20.04■□□□□ 0.8
TNFRSF1A-209ENST00000536717 MARCH6O60337 910 aa20.04■□□□□ 0.8
TNFRSF1A-209ENST00000536717 P4HBP07237 508 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1A-209ENST00000536717 QARSP47897 775 aaKnown RBP20.04■□□□□ 0.8
TNFRSF1A-209ENST00000536717 DRP2Q13474 957 aa20.04■□□□□ 0.8
TNFRSF1A-209ENST00000536717 FAM228AQ86W67 206 aa20.04■□□□□ 0.8
TNFRSF1A-209ENST00000536717 ZNF689Q96CS4 500 aaPredicted RBP20.04■□□□□ 0.8
TNFRSF1A-209ENST00000536717 ADAMTS10Q9H324 1103 aa20.04■□□□□ 0.8
TNFRSF1A-209ENST00000536717 ST3GAL5Q9UNP4 418 aa20.04■□□□□ 0.8
TNFRSF1A-209ENST00000536717 BAG4O95429 457 aaKnown RBP20.03■□□□□ 0.8
TNFRSF1A-209ENST00000536717 LINC00271P0C7V0 271 aa20.03■□□□□ 0.8
TNFRSF1A-209ENST00000536717 GJB2P29033 226 aa20.03■□□□□ 0.8
TNFRSF1A-209ENST00000536717 EPHA7Q15375 998 aa20.03■□□□□ 0.8
TNFRSF1A-209ENST00000536717 SAFBQ15424 915 aaKnown RBP eCLIP20.03■□□□□ 0.8
TNFRSF1A-209ENST00000536717 FBXO18Q8NFZ0 1043 aa20.03■□□□□ 0.8
TNFRSF1A-209ENST00000536717 ADGRA3Q8IWK6 1321 aa20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 DDX11L8A8MPP1 907 aa20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 GPR182O15218 404 aa20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 DGKIO75912 1065 aa20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 GPC3P51654 580 aa20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 EPC2Q52LR7 807 aa20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 PLA2G4FQ68DD2 849 aa20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 NCAPH2Q6IBW4 605 aa20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 FBXO22Q8NEZ5 403 aa20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 ZNF668Q96K58 619 aaPredicted RBP20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 LXNQ9BS40 222 aa20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 RGL1Q9NZL6 768 aa20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 TTC28Q96AY4 2481 aa20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 NCOR1O75376 2440 aa20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 TCF20Q9UGU0 1960 aaKnown RBP20.02■□□□□ 0.8
TNFRSF1A-209ENST00000536717 NEMFO60524 1076 aa20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 MAFO75444 373 aaPredicted RBP20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 CALCRLQ16602 461 aa20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 ODR4Q5SWX8 454 aa20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 NPAS4Q8IUM7 802 aa20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 C4orf19Q8IY42 314 aa20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 TMEM192Q8IY95 271 aa20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 ZNF710Q8N1W2 664 aa20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 SAMD11Q96NU1 681 aa20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 MTMR9Q96QG7 549 aa20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 FOXP1Q9H334 677 aaPredicted RBP20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 FOXD4L1Q9NU39 408 aa20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 LMCD1Q9NZU5 365 aa20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 PCDHA12Q9UN75 941 aa20.02■□□□□ 0.79
TNFRSF1A-209ENST00000536717 DKC1O60832 514 aaKnown RBP eCLIP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms