RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 TMEM62Q0P6H9 643 aa15.13■□□□□ 0.01
RPAIN-205ENST00000536255 MKRN4PQ13434 485 aaPredicted RBP15.13■□□□□ 0.01
RPAIN-205ENST00000536255 PKP1Q13835 747 aa15.13■□□□□ 0.01
RPAIN-205ENST00000536255 LPIN1Q14693 890 aa15.13■□□□□ 0.01
RPAIN-205ENST00000536255 FBXO47Q5MNV8 452 aa15.13■□□□□ 0.01
RPAIN-205ENST00000536255 FAM173BQ6P4H8 233 aa15.13■□□□□ 0.01
RPAIN-205ENST00000536255 KIAA0319LQ8IZA0 1049 aa15.13■□□□□ 0.01
RPAIN-205ENST00000536255 AK8Q96MA6 479 aa15.13■□□□□ 0.01
RPAIN-205ENST00000536255 GUCD1Q96NT3 240 aa15.13■□□□□ 0.01
RPAIN-205ENST00000536255 POLR3CQ9BUI4 534 aaPredicted RBP15.13■□□□□ 0.01
RPAIN-205ENST00000536255 NIFKQ9BYG3 293 aaKnown RBP15.13■□□□□ 0.01
RPAIN-205ENST00000536255 NKX2-4Q9H2Z4 354 aa15.13■□□□□ 0.01
RPAIN-205ENST00000536255 ZNF576Q9H609 170 aa15.13■□□□□ 0.01
RPAIN-205ENST00000536255 RGL1Q9NZL6 768 aa15.13■□□□□ 0.01
RPAIN-205ENST00000536255 SEPT9Q9UHD8 586 aaPredicted RBP15.13■□□□□ 0.01
RPAIN-205ENST00000536255 TRPV2Q9Y5S1 764 aa15.13■□□□□ 0.01
RPAIN-205ENST00000536255 CLIC4Q9Y696 253 aa15.13■□□□□ 0.01
RPAIN-205ENST00000536255 VWA3AA6NCI4 1184 aa15.12■□□□□ 0.01
RPAIN-205ENST00000536255 DDX11L8A8MPP1 907 aa15.12■□□□□ 0.01
RPAIN-205ENST00000536255 LYPLA2O95372 231 aa15.12■□□□□ 0.01
RPAIN-205ENST00000536255 RPA1P27694 616 aa15.12■□□□□ 0.01
RPAIN-205ENST00000536255 YWHABP31946 246 aaKnown RBP15.12■□□□□ 0.01
RPAIN-205ENST00000536255 NUCB2P80303 420 aa15.12■□□□□ 0.01
RPAIN-205ENST00000536255 CTTNQ14247 550 aaKnown RBP15.12■□□□□ 0.01
RPAIN-205ENST00000536255 KRT79Q5XKE5 535 aa15.12■□□□□ 0.01
RPAIN-205ENST00000536255 TSHZ1Q6ZSZ6 1077 aa15.12■□□□□ 0.01
RPAIN-205ENST00000536255 EXOC8Q8IYI6 725 aa15.12■□□□□ 0.01
RPAIN-205ENST00000536255 METTL13Q8N6R0 699 aa15.12■□□□□ 0.01
RPAIN-205ENST00000536255 CCDC43Q96MW1 224 aaKnown RBP15.12■□□□□ 0.01
RPAIN-205ENST00000536255 USP28Q96RU2 1077 aa15.12■□□□□ 0.01
RPAIN-205ENST00000536255 JPH2Q9BR39 696 aaPredicted RBP15.12■□□□□ 0.01
RPAIN-205ENST00000536255 CELF4Q9BZC1 486 aaKnown RBP15.12■□□□□ 0.01
RPAIN-205ENST00000536255 CFAP45Q9UL16 551 aa15.12■□□□□ 0.01
RPAIN-205ENST00000536255 MORC2Q9Y6X9 1032 aaPredicted RBP15.12■□□□□ 0.01
RPAIN-205ENST00000536255 KDM3AQ9Y4C1 1321 aa15.12■□□□□ 0.01
RPAIN-205ENST00000536255 CDH23Q9H251 3354 aa15.11■□□□□ 0.01
RPAIN-205ENST00000536255 SIP14410 1827 aa15.11■□□□□ 0.01
RPAIN-205ENST00000536255 STBD1O95210 358 aa15.11■□□□□ 0.01
RPAIN-205ENST00000536255 AMHP03971 560 aa15.11■□□□□ 0.01
RPAIN-205ENST00000536255 XRCC6P12956 609 aaKnown RBP eCLIP15.11■□□□□ 0.01
RPAIN-205ENST00000536255 MYOGP15173 224 aa15.11■□□□□ 0.01
RPAIN-205ENST00000536255 TMOD1P28289 359 aa15.11■□□□□ 0.01
RPAIN-205ENST00000536255 CCT6AP40227 531 aaKnown RBP15.11■□□□□ 0.01
RPAIN-205ENST00000536255 NASPP49321 788 aaPredicted RBP15.11■□□□□ 0.01
RPAIN-205ENST00000536255 CEBPZQ03701 1054 aaKnown RBP15.11■□□□□ 0.01
RPAIN-205ENST00000536255 TBC1D8BQ0IIM8 1120 aa15.11■□□□□ 0.01
RPAIN-205ENST00000536255 STK38Q15208 465 aa15.11■□□□□ 0.01
RPAIN-205ENST00000536255 PTPAQ15257 358 aa15.11■□□□□ 0.01
RPAIN-205ENST00000536255 TARBP2Q15633 366 aaKnown RBP15.11■□□□□ 0.01
RPAIN-205ENST00000536255 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.11■□□□□ 0.012e-8■■■■■ 28.9
RPAIN-205ENST00000536255 TMCO2Q7Z6W1 182 aaPredicted RBP15.11■□□□□ 0.01
RPAIN-205ENST00000536255 CATSPER3Q86XQ3 398 aa15.11■□□□□ 0.01
RPAIN-205ENST00000536255 USP38Q8NB14 1042 aa15.11■□□□□ 0.01
RPAIN-205ENST00000536255 CDX2Q99626 313 aaPredicted RBP15.11■□□□□ 0.01
RPAIN-205ENST00000536255 SLC28A3Q9HAS3 691 aa15.11■□□□□ 0.01
RPAIN-205ENST00000536255 SQORQ9Y6N5 450 aa15.11■□□□□ 0.01
RPAIN-205ENST00000536255 CHD9Q3L8U1 2897 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 TMEM150BA6NC51 233 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 SLC26A4O43511 780 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 TLL1O43897 1013 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 GJB5O95377 273 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 YEATS4O95619 227 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 CA3P07451 260 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 LONP1P36776 959 aaKnown RBP15.1■□□□□ 0.01
RPAIN-205ENST00000536255 CLCN3P51790 818 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 C1QBPQ07021 282 aaKnown RBP15.1■□□□□ 0.01
RPAIN-205ENST00000536255 GRIN2CQ14957 1233 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 SLC39A14Q15043 492 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 IL17AQ16552 155 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 MTERF2Q49AM1 385 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 PPP2R2DQ66LE6 453 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 EFCAB12Q6NXP0 572 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 ANO5Q75V66 913 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 LINC01465Q8N7H1 131 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 SNX29Q8TEQ0 813 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 CEP170P1Q96L14 293 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 NACC1Q96RE7 527 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 ZBED2Q9BTP6 218 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 AGO3Q9H9G7 860 aaKnown RBP15.1■□□□□ 0.01
RPAIN-205ENST00000536255 CYP26B1Q9NR63 512 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 ANKEF1Q9NU02 776 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 WRAP73Q9P2S5 460 aaPredicted RBP15.1■□□□□ 0.01
RPAIN-205ENST00000536255 STXBP5LQ9Y2K9 1186 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 GBF1Q92538 1859 aa15.1■□□□□ 0.01
RPAIN-205ENST00000536255 MED24O75448 989 aa15.09■□□□□ 0.01
RPAIN-205ENST00000536255 VTNP04004 478 aa15.09■□□□□ 0.01
RPAIN-205ENST00000536255 SPATA31C1P0DKV0 1188 aa15.09■□□□□ 0.01
RPAIN-205ENST00000536255 MARCKSP29966 332 aaPredicted RBP15.09■□□□□ 0.01
RPAIN-205ENST00000536255 CD52P31358 61 aa15.09■□□□□ 0.01
RPAIN-205ENST00000536255 DNM2P50570 870 aa15.09■□□□□ 0.01
RPAIN-205ENST00000536255 PAK2Q13177 524 aa15.09■□□□□ 0.01
RPAIN-205ENST00000536255 FOXD4L6Q3SYB3 417 aaPredicted RBP15.09■□□□□ 0.01
RPAIN-205ENST00000536255 XKR9Q5GH70 373 aa15.09■□□□□ 0.01
RPAIN-205ENST00000536255 FOXD4L3Q6VB84 417 aaPredicted RBP15.09■□□□□ 0.01
RPAIN-205ENST00000536255 MYOCDQ8IZQ8 938 aa15.09■□□□□ 0.01
RPAIN-205ENST00000536255 ZNF710Q8N1W2 664 aa15.09■□□□□ 0.01
RPAIN-205ENST00000536255 LRRC71Q8N4P6 559 aa15.09■□□□□ 0.01
RPAIN-205ENST00000536255 KCTD17Q8N5Z5 321 aa15.09■□□□□ 0.01
RPAIN-205ENST00000536255 LINC00301Q8NCQ3 95 aa15.09■□□□□ 0.01
RPAIN-205ENST00000536255 SLC7A3Q8WY07 619 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms