RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TMOD1P28289 359 aa14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 CA8P35219 290 aa14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 PPM1AP35813 382 aa14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 ZXDAP98168 799 aa14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 DUSP6Q16828 381 aa14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 FAM102BQ5T8I3 360 aa14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 TYW1BQ6NUM6 668 aa14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 BMP8AQ7Z5Y6 402 aa14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 SMAP1Q8IYB5 467 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 KIAA0319LQ8IZA0 1049 aa14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 LRRC43Q8N309 656 aa14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 TCF25Q9BQ70 676 aa14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 TYW1Q9NV66 732 aaKnown RBP14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 FNDC1Q4ZHG4 1894 aaPredicted RBP14.71□□□□□ -0.05
TNFRSF1A-207ENST00000535958 CCDC196A0A1B0GTZ2 297 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 C9IYK1 514 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 VTNP04004 478 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 FGFR1P11362 822 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 ATF7P17544 494 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 TECP42680 631 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 KRT17Q04695 432 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 SIGLEC14Q08ET2 396 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 KRT32Q14532 448 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 BMS1Q14692 1282 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 ZNF746Q6NUN9 644 aaPredicted RBP14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 LLGL2Q6P1M3 1020 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 FAM228AQ86W67 206 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 REXO1Q8N1G1 1221 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 TMEM40Q8WWA1 233 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 MRPS27Q92552 414 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 FAM167AQ96KS9 214 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 TCEANC2Q96MN5 208 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 TMEM117Q9H0C3 514 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 ELAC1Q9H777 363 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 CDHR5Q9HBB8 845 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 C6orf50Q9HD87 102 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 NGRNQ9NPE2 291 aaKnown RBP14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 LZTS1Q9Y250 596 aa14.7□□□□□ -0.06
TNFRSF1A-207ENST00000535958 ZNF318Q5VUA4 2279 aa14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 FAM86B1E9PN63 330 aa14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 MAGEB2O15479 319 aa14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 C22orf31O95567 290 aa14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 FAM86B2P0C5J1 330 aa14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 CLK2P49760 499 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 METAP2P50579 478 aaKnown RBP eCLIP14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 ERVFC1P60507 584 aa14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 AKAP17AQ02040 695 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 APOBRQ0VD83 1088 aa14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 COL9A3Q14050 684 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 CBX2Q14781 532 aaPredicted RBP14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 DHX32Q7L7V1 743 aaKnown RBP14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 FBXL6Q8N531 539 aa14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 TMEM87AQ8NBN3 555 aa14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 RNF169Q8NCN4 708 aa14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 ZNF558Q96NG5 402 aa14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 GABBR1Q9UBS5 961 aa14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 PCDHA10Q9Y5I2 948 aa14.69□□□□□ -0.06
TNFRSF1A-207ENST00000535958 TECTAO75443 2155 aa14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 EVPLQ92817 2033 aa14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 MYH9P35579 1960 aaKnown RBP14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 HMGB1P09429 215 aaKnown RBP14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 GNA11P29992 359 aa14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 CLCN3P51790 818 aa14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 RCAN1P53805 252 aa14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 TMC7Q7Z402 723 aa14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 ZNF710Q8N1W2 664 aa14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 BICD2Q8TD16 824 aa14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 TSHZ2Q9NRE2 1034 aa14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 HCSTQ9UBK5 93 aa14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 BRPF3Q9ULD4 1205 aa14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 NR2E1Q9Y466 385 aa14.68□□□□□ -0.06
TNFRSF1A-207ENST00000535958 WDR64B1ANS9 1081 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 FSCN2O14926 492 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 CYP3A4P08684 503 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 HOXB8P17481 243 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 SP100P23497 879 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 NLRP11P59045 1033 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 RBM10P98175 930 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 PLCB3Q01970 1234 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 FUT2Q10981 343 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 SMC1AQ14683 1233 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 PTPN21Q16825 1174 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 PFKFB3Q16875 520 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 TPRNQ4KMQ1 711 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 PRR16Q569H4 304 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 CES5AQ6NT32 575 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 EFCAB12Q6NXP0 572 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 ANKRD54Q6NXT1 300 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 KCNT2Q6UVM3 1135 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 PRSS33Q8NF86 280 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 CCDC148Q8NFR7 591 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 SUSD6Q92537 303 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 CASP10Q92851 521 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 APOL5Q9BWW9 433 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 MRPL9Q9BYD2 267 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 IRF2BPLQ9H1B7 796 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 CWH43Q9H720 699 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 NRBP2Q9NSY0 501 aa14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 MAFBQ9Y5Q3 323 aaPredicted RBP14.67□□□□□ -0.06
TNFRSF1A-207ENST00000535958 IGLV3-22A0A075B6J6 115 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms