RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 M0QZ92 97 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 DDX39AO00148 427 aaKnown RBP12.21□□□□□ -0.45
CCDC60-202ENST00000535685 MSH4O15457 936 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 SFNP31947 248 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 ANKRD1Q15327 319 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 AAK1Q2M2I8 961 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 FAM117BQ6P1L5 589 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 B3GNT9Q6UX72 402 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 KIAA0319LQ8IZA0 1049 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 TBCKQ8TEA7 893 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 TRAPPC12Q8WVT3 735 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 ZNF689Q96CS4 500 aaPredicted RBP12.21□□□□□ -0.45
CCDC60-202ENST00000535685 FAM167AQ96KS9 214 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 YME1L1Q96TA2 773 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 CDHR5Q9HBB8 845 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 TCEAL9Q9UHQ7 104 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 CEP131Q9UPN4 1083 aa12.21□□□□□ -0.45
CCDC60-202ENST00000535685 C5orf67F2Z3F1 127 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 H3BNC9 293 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 MAGEB2O15479 319 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 PPFIA3O75145 1194 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 PSMD10O75832 226 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 C22orf31O95567 290 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 RB1P06400 928 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 LINC00271P0C7V0 271 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 JAK3P52333 1124 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 SCRN1Q12765 414 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 EPC2Q52LR7 807 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 ODR4Q5SWX8 454 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 KRT25Q7Z3Z0 450 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 RTN4RL1Q86UN2 441 aaPredicted RBP12.2□□□□□ -0.46
CCDC60-202ENST00000535685 PARP9Q8IXQ6 854 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 GDPD5Q8WTR4 605 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 CLP1Q92989 425 aaKnown RBP12.2□□□□□ -0.46
CCDC60-202ENST00000535685 ZBTB10Q96DT7 871 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 C17orf80Q9BSJ5 609 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 PHF20Q9BVI0 1012 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 FAM49AQ9H0Q0 323 aaPredicted RBP12.2□□□□□ -0.46
CCDC60-202ENST00000535685 SLKQ9H2G2 1235 aaPredicted RBP12.2□□□□□ -0.46
CCDC60-202ENST00000535685 DISC1Q9NRI5 854 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 TPCN1Q9ULQ1 816 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 PADI3Q9ULW8 664 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 RWDD3Q9Y3V2 267 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 PCDHGA10Q9Y5H3 936 aa12.2□□□□□ -0.46
CCDC60-202ENST00000535685 KIAA1671Q9BY89 1806 aa12.19□□□□□ -0.46
CCDC60-202ENST00000535685 DGKIO75912 1065 aa12.19□□□□□ -0.46
CCDC60-202ENST00000535685 BMP1P13497 986 aa12.19□□□□□ -0.46
CCDC60-202ENST00000535685 CD52P31358 61 aa12.19□□□□□ -0.46
CCDC60-202ENST00000535685 NONOQ15233 471 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCDC60-202ENST00000535685 KRT40Q6A162 431 aa12.19□□□□□ -0.46
CCDC60-202ENST00000535685 NPAS4Q8IUM7 802 aa12.19□□□□□ -0.46
CCDC60-202ENST00000535685 TMEM192Q8IY95 271 aa12.19□□□□□ -0.46
CCDC60-202ENST00000535685 LINC01465Q8N7H1 131 aa12.19□□□□□ -0.46
CCDC60-202ENST00000535685 LINC01599Q8WXQ3 324 aa12.19□□□□□ -0.46
CCDC60-202ENST00000535685 MRPL38Q96DV4 380 aaKnown RBP12.19□□□□□ -0.46
CCDC60-202ENST00000535685 TEKT3Q9BXF9 490 aa12.19□□□□□ -0.46
CCDC60-202ENST00000535685 ERVK-5Q9HDB9 667 aa12.19□□□□□ -0.46
CCDC60-202ENST00000535685 GABBR1Q9UBS5 961 aa12.19□□□□□ -0.46
CCDC60-202ENST00000535685 MUC3AQ02505 3323 aa12.19□□□□□ -0.46
CCDC60-202ENST00000535685 ADGRA3Q8IWK6 1321 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 ZNF862O60290 1169 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 GAS7O60861 476 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 UPP2O95045 317 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 STAG3L1P0CL83 205 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 XBP1P17861 261 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 CRYBB1P53674 252 aaPredicted RBP12.18□□□□□ -0.46
CCDC60-202ENST00000535685 PAK2Q13177 524 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 STK3Q13188 491 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 TARBP2Q15633 366 aaKnown RBP12.18□□□□□ -0.46
CCDC60-202ENST00000535685 PTPROQ16827 1216 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 LRCH2Q5VUJ6 765 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 PPP4R3AQ6IN85 833 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 CMTR2Q8IYT2 770 aaKnown RBP12.18□□□□□ -0.46
CCDC60-202ENST00000535685 MICALL1Q8N3F8 863 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 FIBCD1Q8N539 461 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 ETNPPLQ8TBG4 499 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 HLA-CQ95604 372 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 AIFM3Q96NN9 605 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 FAM117AQ9C073 453 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 LMAN2LQ9H0V9 348 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 NRBP2Q9NSY0 501 aa12.18□□□□□ -0.46
CCDC60-202ENST00000535685 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.17□□□□□ -0.46
CCDC60-202ENST00000535685 RBAK-RBAKDNI3L0D1 243 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 GPR182O15218 404 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 GPR32O75388 356 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 CTDNEP1O95476 244 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 TDP2O95551 362 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 OATP04181 439 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 GCFC2P16383 781 aaKnown RBP12.17□□□□□ -0.46
CCDC60-202ENST00000535685 BMPR1AP36894 532 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 AK2P54819 239 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 COL19A1Q14993 1142 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 TIGD5Q53EQ6 642 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 NAALADL2Q58DX5 795 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 CKAP2LQ8IYA6 745 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 WASF1Q92558 559 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 FAM20AQ96MK3 541 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 NAP1L4Q99733 375 aaKnown RBP12.17□□□□□ -0.46
CCDC60-202ENST00000535685 PLVAPQ9BX97 442 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 NIFKQ9BYG3 293 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms