RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 PRLP01236 227 aa7.3□□□□□ -1.24
PRKDC-205ENST00000535375 DSG1Q02413 1049 aa7.3□□□□□ -1.24
PRKDC-205ENST00000535375 ZNF827Q17R98 1081 aa7.3□□□□□ -1.24
PRKDC-205ENST00000535375 PRAMEF9Q5VWM5 478 aa7.3□□□□□ -1.24
PRKDC-205ENST00000535375 FILIP1Q7Z7B0 1213 aa7.3□□□□□ -1.24
PRKDC-205ENST00000535375 CIR1Q86X95 450 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-205ENST00000535375 CHST13Q8NET6 341 aa7.3□□□□□ -1.24
PRKDC-205ENST00000535375 LMF1Q96S06 567 aa7.3□□□□□ -1.24
PRKDC-205ENST00000535375 RBM15Q96T37 977 aaKnown RBP eCLIP7.3□□□□□ -1.24
PRKDC-205ENST00000535375 H2AFY2Q9P0M6 372 aaPredicted RBP7.3□□□□□ -1.24
PRKDC-205ENST00000535375 PPP4R1LQ9P1A2 415 aa7.3□□□□□ -1.24
PRKDC-205ENST00000535375 FAM83GA6ND36 823 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 MAFGO15525 162 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 PDE8AO60658 829 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 APOL3O95236 402 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 CNOT4O95628 575 aaKnown RBP7.29□□□□□ -1.24
PRKDC-205ENST00000535375 RGS3P49796 1198 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 IL2P60568 153 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 RAC3P60763 192 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 SPATS1Q496A3 300 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 TMEM200BQ69YZ2 307 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 C11orf74Q86VG3 221 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 EFHBQ8N7U6 833 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 C7orf31Q8N865 590 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 GIMAP8Q8ND71 665 aaPredicted RBP7.29□□□□□ -1.24
PRKDC-205ENST00000535375 RPGRQ92834 1020 aaKnown RBP7.29□□□□□ -1.24
PRKDC-205ENST00000535375 SAMD11Q96NU1 681 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 GPR101Q96P66 508 aaPredicted RBP7.29□□□□□ -1.24
PRKDC-205ENST00000535375 LRRC37BQ96QE4 947 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 FAM184BQ9ULE4 1060 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 NR2E1Q9Y466 385 aa7.29□□□□□ -1.24
PRKDC-205ENST00000535375 CD40P25942 277 aa7.28□□□□□ -1.24
PRKDC-205ENST00000535375 PHYKPLQ8IUZ5 450 aa7.28□□□□□ -1.24
PRKDC-205ENST00000535375 PTPN18Q99952 460 aa7.28□□□□□ -1.24
PRKDC-205ENST00000535375 SMPD4Q9NXE4 827 aa7.28□□□□□ -1.24
PRKDC-205ENST00000535375 SAE1Q9UBE0 346 aaPredicted RBP7.28□□□□□ -1.24
PRKDC-205ENST00000535375 MAPRE3Q9UPY8 281 aa7.28□□□□□ -1.24
PRKDC-205ENST00000535375 GSG1L2A8MUP6 293 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 MAFO75444 373 aaPredicted RBP7.27□□□□□ -1.25
PRKDC-205ENST00000535375 MRE11P49959 708 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 STAT5BP51692 787 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 BCAR1P56945 870 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 PCOLCEQ15113 449 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 SEPT7Q16181 437 aaKnown RBP7.27□□□□□ -1.25
PRKDC-205ENST00000535375 DGKDQ16760 1214 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 AGBL4Q5VU57 503 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 CREB3L3Q68CJ9 461 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 TRIM68Q6AZZ1 485 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 ESRP1Q6NXG1 681 aaKnown RBP7.27□□□□□ -1.25
PRKDC-205ENST00000535375 USP30Q70CQ3 517 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 LARP4Q71RC2 724 aaKnown RBP eCLIP7.27□□□□□ -1.25
PRKDC-205ENST00000535375 SMC1BQ8NDV3 1235 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 RTF1Q92541 710 aaKnown RBP7.27□□□□□ -1.25
PRKDC-205ENST00000535375 NEIL1Q96FI4 390 aaPredicted RBP7.27□□□□□ -1.25
PRKDC-205ENST00000535375 KIAA1683Q9H0B3 1180 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 OR10A2Q9H208 303 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 C12orf65Q9H3J6 166 aaKnown RBP7.27□□□□□ -1.25
PRKDC-205ENST00000535375 KCMF1Q9P0J7 381 aa7.27□□□□□ -1.25
PRKDC-205ENST00000535375 A0A087X0B3 334 aa7.26□□□□□ -1.25
PRKDC-205ENST00000535375 ARHGAP6O43182 974 aa7.26□□□□□ -1.25
PRKDC-205ENST00000535375 SESN2P58004 480 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-205ENST00000535375 ADCY2Q08462 1091 aa7.26□□□□□ -1.25
PRKDC-205ENST00000535375 NOLC1Q14978 699 aaKnown RBP eCLIP7.26□□□□□ -1.25
PRKDC-205ENST00000535375 RNF151Q2KHN1 245 aa7.26□□□□□ -1.25
PRKDC-205ENST00000535375 USP7Q93009 1102 aa7.26□□□□□ -1.25
PRKDC-205ENST00000535375 PUF60Q9UHX1 559 aaKnown RBP7.26□□□□□ -1.25
PRKDC-205ENST00000535375 SYNPO2Q9UMS6 1093 aa7.26□□□□□ -1.25
PRKDC-205ENST00000535375 VWA7Q9Y334 891 aa7.26□□□□□ -1.25
PRKDC-205ENST00000535375 RAB11FIP3O75154 756 aa7.25□□□□□ -1.25
PRKDC-205ENST00000535375 H2AFYO75367 372 aaKnown RBP7.25□□□□□ -1.25
PRKDC-205ENST00000535375 LSP1P33241 339 aa7.25□□□□□ -1.25
PRKDC-205ENST00000535375 MAGEA10P43363 369 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-205ENST00000535375 LSSP48449 732 aa7.25□□□□□ -1.25
PRKDC-205ENST00000535375 EFEMP1Q12805 493 aa7.25□□□□□ -1.25
PRKDC-205ENST00000535375 LRRC32Q14392 662 aa7.25□□□□□ -1.25
PRKDC-205ENST00000535375 DDX46Q7L014 1031 aaKnown RBP7.25□□□□□ -1.25
PRKDC-205ENST00000535375 TAX1BP1Q86VP1 789 aa7.25□□□□□ -1.25
PRKDC-205ENST00000535375 TTC9BQ8N6N2 239 aa7.25□□□□□ -1.25
PRKDC-205ENST00000535375 OR5AN1Q8NGI8 311 aa7.25□□□□□ -1.25
PRKDC-205ENST00000535375 C8orf49Q96NF6 230 aa7.25□□□□□ -1.25
PRKDC-205ENST00000535375 GNRHR2Q96P88 292 aa7.25□□□□□ -1.25
PRKDC-205ENST00000535375 SSBP3Q9BWW4 388 aaPredicted RBP7.25□□□□□ -1.25
PRKDC-205ENST00000535375 MEGF9Q9H1U4 602 aa7.25□□□□□ -1.25
PRKDC-205ENST00000535375 DEF6Q9H4E7 631 aa7.25□□□□□ -1.25
PRKDC-205ENST00000535375 MAGEL2Q9UJ55 1249 aa7.25□□□□□ -1.25
PRKDC-205ENST00000535375 GPR42O15529 346 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 CDC14BO60729 498 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 PRPF6O94906 941 aaKnown RBP7.24□□□□□ -1.25
PRKDC-205ENST00000535375 FKBP9O95302 570 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 CR2P20023 1033 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 SMAD3P84022 425 aaKnown RBP7.24□□□□□ -1.25
PRKDC-205ENST00000535375 MYBPC3Q14896 1274 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 CT47A1Q5JQC4 288 aaPredicted RBP7.24□□□□□ -1.25
PRKDC-205ENST00000535375 KLHDC10Q6PID8 442 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 FKBP9P1Q75LS8 142 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 GFM2Q969S9 779 aaKnown RBP7.24□□□□□ -1.25
PRKDC-205ENST00000535375 DYDC2Q96IM9 177 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 MYL10Q9BUA6 226 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 KRTAP4-2Q9BYR5 136 aa7.24□□□□□ -1.25
PRKDC-205ENST00000535375 POFUT1Q9H488 388 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms