RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 MRPL42Q9Y6G3 142 aaKnown RBP18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 EVPLQ92817 2033 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 MYO7AQ13402 2215 aa18.26■□□□□ 0.51
CLSTN3-204ENST00000535313 GRM6O15303 877 aa18.25■□□□□ 0.51
CLSTN3-204ENST00000535313 NCK2O43639 380 aa18.25■□□□□ 0.51
CLSTN3-204ENST00000535313 ZNF862O60290 1169 aa18.25■□□□□ 0.51
CLSTN3-204ENST00000535313 GPR32O75388 356 aa18.25■□□□□ 0.51
CLSTN3-204ENST00000535313 TDP2O95551 362 aa18.25■□□□□ 0.51
CLSTN3-204ENST00000535313 ANAPC15P60006 121 aa18.25■□□□□ 0.51
CLSTN3-204ENST00000535313 ANKRD1Q15327 319 aa18.25■□□□□ 0.51
CLSTN3-204ENST00000535313 PAN2Q504Q3 1202 aaKnown RBP18.25■□□□□ 0.51
CLSTN3-204ENST00000535313 MOXD1Q6UVY6 613 aa18.25■□□□□ 0.51
CLSTN3-204ENST00000535313 EP400NLQ6ZTU2 488 aa18.25■□□□□ 0.51
CLSTN3-204ENST00000535313 MIER3Q7Z3K6 550 aa18.25■□□□□ 0.51
CLSTN3-204ENST00000535313 GJA10Q969M2 543 aa18.25■□□□□ 0.51
CLSTN3-204ENST00000535313 RGS18Q9NS28 235 aa18.25■□□□□ 0.51
CLSTN3-204ENST00000535313 CCDC194A0A1B0GVG4 234 aa18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 MGEA5O60502 916 aa18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 PFKFB2O60825 505 aa18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 PSMD10O75832 226 aa18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 NLRP11P59045 1033 aaKnown RBP18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 NPY5RQ15761 445 aa18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 UGCGQ16739 394 aa18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 PUS10Q3MIT2 529 aaKnown RBP18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 NAALADL2Q58DX5 795 aa18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 SLC24A5Q71RS6 500 aa18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 FAM228AQ86W67 206 aa18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 P2RX5Q93086 422 aa18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 PABPC5Q96DU9 382 aaKnown RBP18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 DDX25Q9UHL0 483 aaKnown RBP18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 TPCN1Q9ULQ1 816 aa18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 KCNJ14Q9UNX9 436 aa18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 PLAGL2Q9UPG8 496 aa18.24■□□□□ 0.51
CLSTN3-204ENST00000535313 STK36Q9NRP7 1315 aa18.23■□□□□ 0.51
CLSTN3-204ENST00000535313 MMP1P03956 469 aa18.23■□□□□ 0.51
CLSTN3-204ENST00000535313 TBC1D8BQ0IIM8 1120 aa18.23■□□□□ 0.51
CLSTN3-204ENST00000535313 INF2Q27J81 1249 aa18.23■□□□□ 0.51
CLSTN3-204ENST00000535313 PTCRAQ6ISU1 281 aaPredicted RBP18.23■□□□□ 0.51
CLSTN3-204ENST00000535313 LRRC71Q8N4P6 559 aa18.23■□□□□ 0.51
CLSTN3-204ENST00000535313 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.23■□□□□ 0.51
CLSTN3-204ENST00000535313 NEK9Q8TD19 979 aa18.23■□□□□ 0.51
CLSTN3-204ENST00000535313 MBOAT7Q96N66 472 aa18.23■□□□□ 0.51
CLSTN3-204ENST00000535313 SCLT1Q96NL6 688 aa18.23■□□□□ 0.51
CLSTN3-204ENST00000535313 PHF20Q9BVI0 1012 aa18.23■□□□□ 0.51
CLSTN3-204ENST00000535313 ALG13Q9NP73 1137 aaKnown RBP18.23■□□□□ 0.51
CLSTN3-204ENST00000535313 C9IYK1 514 aa18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 H3BQ06 376 aaPredicted RBP18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 EIF5BO60841 1220 aaKnown RBP18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 CSPG5O95196 566 aa18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 GATMP50440 423 aa18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 LETM2Q2VYF4 491 aa18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 XKR3Q5GH77 459 aa18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 SPOUT1Q5T280 376 aaKnown RBP18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 LINC01465Q8N7H1 131 aa18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 ETNPPLQ8TBG4 499 aa18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 WASF1Q92558 559 aa18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 ADAMTS10Q9H324 1103 aa18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 CLDND1Q9NY35 253 aa18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 SEPT9Q9UHD8 586 aaPredicted RBP18.22■□□□□ 0.51
CLSTN3-204ENST00000535313 TBKBP1A7MCY6 615 aa18.21■□□□□ 0.51
CLSTN3-204ENST00000535313 ZSCAN20P17040 1043 aaPredicted RBP18.21■□□□□ 0.51
CLSTN3-204ENST00000535313 EIF4BP23588 611 aaKnown RBP18.21■□□□□ 0.51
CLSTN3-204ENST00000535313 COL19A1Q14993 1142 aa18.21■□□□□ 0.51
CLSTN3-204ENST00000535313 NEK8Q86SG6 692 aa18.21■□□□□ 0.51
CLSTN3-204ENST00000535313 KLHL23Q8NBE8 558 aa18.21■□□□□ 0.51
CLSTN3-204ENST00000535313 PPP2R3CQ969Q6 453 aa18.21■□□□□ 0.51
CLSTN3-204ENST00000535313 C1QTNF1Q9BXJ1 281 aa18.21■□□□□ 0.51
CLSTN3-204ENST00000535313 NIFKQ9BYG3 293 aaKnown RBP18.21■□□□□ 0.51
CLSTN3-204ENST00000535313 ATP6V0A4Q9HBG4 840 aa18.21■□□□□ 0.51
CLSTN3-204ENST00000535313 AAASQ9NRG9 546 aa18.21■□□□□ 0.51
CLSTN3-204ENST00000535313 FAM50BQ9Y247 325 aa18.21■□□□□ 0.51
CLSTN3-204ENST00000535313 WDR81Q562E7 1941 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 GRXCR2A6NFK2 248 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 SLC37A4O43826 429 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 ITGB1P05556 798 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 GCFC2P16383 781 aaKnown RBP18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 GPC3P51654 580 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 AK2P54819 239 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 CDC42EP1Q00587 391 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 DSC3Q14574 896 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 TARBP2Q15633 366 aaKnown RBP18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 MTERF2Q49AM1 385 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 FAM102BQ5T8I3 360 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 B3GNT9Q6UX72 402 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 SPPL3Q8TCT6 385 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 NLRP7Q8WX94 980 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 FAM20AQ96MK3 541 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 NAP1L4Q99733 375 aaKnown RBP18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 ELAC1Q9H777 363 aaKnown RBP18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 TMEM161AQ9NX61 479 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 ORC3Q9UBD5 711 aaPredicted RBP18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 PCDHB12Q9Y5F1 795 aa18.2■□□□□ 0.5
CLSTN3-204ENST00000535313 DDX11L8A8MPP1 907 aa18.19■□□□□ 0.5
CLSTN3-204ENST00000535313 MARCH6O60337 910 aa18.19■□□□□ 0.5
CLSTN3-204ENST00000535313 IL9P15248 144 aa18.19■□□□□ 0.5
CLSTN3-204ENST00000535313 DNM2P50570 870 aa18.19■□□□□ 0.5
CLSTN3-204ENST00000535313 PSMC5P62195 406 aa18.19■□□□□ 0.5
CLSTN3-204ENST00000535313 FAM189BP81408 668 aa18.19■□□□□ 0.5
CLSTN3-204ENST00000535313 HYAL1Q12794 435 aa18.19■□□□□ 0.5
CLSTN3-204ENST00000535313 PPP4R3AQ6IN85 833 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms