RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 CCDC194A0A1B0GVG4 234 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 MAGEB2O15479 319 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 ZNF862O60290 1169 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 PSMD10O75832 226 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 DGKIO75912 1065 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 CSPG5O95196 566 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 STAG3L1P0CL83 205 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 BMP1P13497 986 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 XBP1P17861 261 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 CYP3A7P24462 503 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 ANKRD1Q15327 319 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 KIZQ2M2Z5 673 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 LETM2Q2VYF4 491 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 PAN2Q504Q3 1202 aaKnown RBP9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 TIGD5Q53EQ6 642 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 ODR4Q5SWX8 454 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 EFCAB12Q6NXP0 572 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 MOXD1Q6UVY6 613 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 MIER3Q7Z3K6 550 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 FAM177A1Q8N128 213 aaPredicted RBP9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 LRRC71Q8N4P6 559 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 NECAB1Q8N987 351 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 TMEM40Q8WWA1 233 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 ZNF689Q96CS4 500 aaPredicted RBP9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 PHF20Q9BVI0 1012 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 NRBP2Q9NSY0 501 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 GJB4Q9NTQ9 266 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 ORC3Q9UBD5 711 aaPredicted RBP9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 SEPT9Q9UHD8 586 aaPredicted RBP9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 DDX25Q9UHL0 483 aaKnown RBP9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 AKT3Q9Y243 479 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 RWDD3Q9Y3V2 267 aa9.62□□□□□ -0.87
SFSWAP-202ENST00000535202 DENND3A2RUS2 1198 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 GPR182O15218 404 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 SLC37A4O43826 429 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 MGEA5O60502 916 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 LARGE1O95461 756 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 CTDNEP1O95476 244 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 RB1P06400 928 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 LINC00271P0C7V0 271 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 TMOD1P28289 359 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 BMPR1AP36894 532 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 SARSP49591 514 aaKnown RBP9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 GATMP50440 423 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 CRYBB1P53674 252 aaPredicted RBP9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 MTERF2Q49AM1 385 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 PIK3AP1Q6ZUJ8 805 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 NEK8Q86SG6 692 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 FAM228AQ86W67 206 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 CMTR2Q8IYT2 770 aaKnown RBP9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 BANK1Q8NDB2 785 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 RDM1Q8NG50 284 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 ETNPPLQ8TBG4 499 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 ZNF668Q96K58 619 aaPredicted RBP9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 MBOAT7Q96N66 472 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 SCLT1Q96NL6 688 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 C11orf84Q9BUA3 381 aaPredicted RBP9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 UBE2ZQ9H832 354 aaPredicted RBP9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 ST3GAL5Q9UNP4 418 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 MRPL42Q9Y6G3 142 aaKnown RBP9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 FNDC1Q4ZHG4 1894 aaPredicted RBP9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 A0A0C4DFX4 3053 aa9.61□□□□□ -0.87
SFSWAP-202ENST00000535202 TMEM150BA6NC51 233 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 C5orf67F2Z3F1 127 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 GRM6O15303 877 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 CCNT1O60563 726 aaKnown RBP9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 GPR32O75388 356 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 KCNA5P22460 613 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 FOSBP53539 338 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 NLRP11P59045 1033 aaKnown RBP9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 TBC1D8BQ0IIM8 1120 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 ME3Q16798 604 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 HS1BP3Q53T59 392 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 TCEAL5Q5H9L2 206 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 SPOUT1Q5T280 376 aaKnown RBP9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 EP400NLQ6ZTU2 488 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 LINC01465Q8N7H1 131 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 OXER1Q8TDS5 423 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 WASF1Q92558 559 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 CLP1Q92989 425 aaKnown RBP9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 GTF3C6Q969F1 213 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 ADAM2Q99965 735 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 NSUN3Q9H649 340 aaKnown RBP9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 RGS18Q9NS28 235 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 C1orf112Q9NSG2 853 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 PCDHB7Q9Y5E2 793 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 REV3LO60673 3130 aa9.6□□□□□ -0.87
SFSWAP-202ENST00000535202 MARCH6O60337 910 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 OFD1O75665 1012 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 SEC24BO95487 1268 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 GCFC2P16383 781 aaKnown RBP9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 KRT2P35908 639 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 GPC3P51654 580 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 NEK4P51957 841 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 XKR3Q5GH77 459 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 PPP4R3AQ6IN85 833 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 B3GNT9Q6UX72 402 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 SLC24A5Q71RS6 500 aa9.59□□□□□ -0.87
SFSWAP-202ENST00000535202 CRIPAKQ8N1N5 446 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms