RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 TMEM59LQ9UK28 342 aa9.72□□□□□ -0.85
SORL1-213ENST00000534754 NFS1Q9Y697 457 aa9.72□□□□□ -0.85
SORL1-213ENST00000534754 RLFQ13129 1914 aa9.72□□□□□ -0.85
SORL1-213ENST00000534754 DNM1LO00429 736 aa9.71□□□□□ -0.85
SORL1-213ENST00000534754 PDHBP11177 359 aa9.71□□□□□ -0.85
SORL1-213ENST00000534754 AKR1B1P15121 316 aa9.71□□□□□ -0.85
SORL1-213ENST00000534754 SCTRP47872 440 aa9.71□□□□□ -0.85
SORL1-213ENST00000534754 ERVK-9P63128 1117 aa9.71□□□□□ -0.85
SORL1-213ENST00000534754 ATP2B2Q01814 1243 aa9.71□□□□□ -0.85
SORL1-213ENST00000534754 VGLL4Q14135 290 aa9.71□□□□□ -0.85
SORL1-213ENST00000534754 GKAP1Q5VSY0 366 aaPredicted RBP9.71□□□□□ -0.85
SORL1-213ENST00000534754 GUF1Q8N442 669 aaKnown RBP9.71□□□□□ -0.85
SORL1-213ENST00000534754 CALML4Q96GE6 196 aa9.71□□□□□ -0.85
SORL1-213ENST00000534754 SCLT1Q96NL6 688 aa9.71□□□□□ -0.85
SORL1-213ENST00000534754 TANGO6Q9C0B7 1094 aa9.71□□□□□ -0.85
SORL1-213ENST00000534754 HAUS2Q9NVX0 235 aa9.71□□□□□ -0.85
SORL1-213ENST00000534754 COL11A1P12107 1806 aaPredicted RBP9.71□□□□□ -0.86
SORL1-213ENST00000534754 PVALEFA0A1B0GWK0 134 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 TSPY2A6NKD2 308 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 PPP1R12BO60237 982 aaPredicted RBP9.71□□□□□ -0.86
SORL1-213ENST00000534754 SSBP05455 408 aaKnown RBP eCLIP9.71□□□□□ -0.861e-5■□□□□ 10.2
SORL1-213ENST00000534754 SCP2P22307 547 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 KLRC1P26715 233 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 HOXA7P31268 230 aaPredicted RBP9.71□□□□□ -0.86
SORL1-213ENST00000534754 GNAQP50148 359 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 RNASE9P60153 205 aaKnown RBP9.71□□□□□ -0.86
SORL1-213ENST00000534754 XRCC4Q13426 336 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 TTLL12Q14166 644 aaPredicted RBP9.71□□□□□ -0.86
SORL1-213ENST00000534754 RPS6KA1Q15418 735 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 UAP1Q16222 522 aaPredicted RBP9.71□□□□□ -0.86
SORL1-213ENST00000534754 SLC18A3Q16572 532 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 QPCTQ16769 361 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 LDLRAD1Q5T700 205 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 UNC13DQ70J99 1090 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 SV2BQ7L1I2 683 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 HEATR3Q7Z4Q2 680 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 STAG2Q8N3U4 1231 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 CNKSR2Q8WXI2 1034 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 TSG101Q99816 390 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 NLRC4Q9NPP4 1024 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 BCCIPQ9P287 314 aaKnown RBP eCLIP9.71□□□□□ -0.86
SORL1-213ENST00000534754 SWAP70Q9UH65 585 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 TPX2Q9ULW0 747 aaKnown RBP9.71□□□□□ -0.86
SORL1-213ENST00000534754 SNCAIPQ9Y6H5 919 aa9.71□□□□□ -0.86
SORL1-213ENST00000534754 GHRP10912 638 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 TMOD1P28289 359 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 ECHS1P30084 290 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 CAP2P40123 477 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 HTRA3P83110 453 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 CRYMQ14894 314 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 KIAA0753Q2KHM9 967 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 FAM83BQ5T0W9 1011 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 RCSD1Q6JBY9 416 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 FOXR2Q6PJQ5 311 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 LRRC55Q6ZSA7 311 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 SAPCD2Q86UD0 394 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 FAM228AQ86W67 206 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 OR2W6PQ8NHA6 318 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 RAPGEF5Q92565 580 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 TATDN2Q93075 761 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 HOOK2Q96ED9 719 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 PBKQ96KB5 322 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 KDM4CQ9H3R0 1056 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 ATP6V0A4Q9HBG4 840 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 BARHL2Q9NY43 387 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 PACSIN2Q9UNF0 486 aaPredicted RBP9.7□□□□□ -0.86
SORL1-213ENST00000534754 SMCHD1A6NHR9 2005 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 PLIN4Q96Q06 1357 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 A0A1B0GUA9 196 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 STXBP3O00186 592 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 KCNK3O14649 394 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 CCNT1O60563 726 aaKnown RBP9.7□□□□□ -0.86
SORL1-213ENST00000534754 TLR2O60603 784 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 DNAJC8O75937 253 aaPredicted RBP9.7□□□□□ -0.86
SORL1-213ENST00000534754 GH2P01242 217 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 KCNMA1Q12791 1236 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 SPRED3Q2MJR0 410 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 CERKLQ49MI3 558 aaPredicted RBP9.7□□□□□ -0.86
SORL1-213ENST00000534754 KRT25Q7Z3Z0 450 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 CPLX4Q7Z7G2 160 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 SCFD2Q8WU76 684 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 UBLCP1Q8WVY7 318 aaPredicted RBP9.7□□□□□ -0.86
SORL1-213ENST00000534754 TBC1D5Q92609 795 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 HVCN1Q96D96 273 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 CALR3Q96L12 384 aaKnown RBP9.7□□□□□ -0.86
SORL1-213ENST00000534754 RIC8AQ9NPQ8 531 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 STK17AQ9UEE5 414 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 ZBTB21Q9ULJ3 1066 aa9.7□□□□□ -0.86
SORL1-213ENST00000534754 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.7□□□□□ -0.86
SORL1-213ENST00000534754 THSD7BQ9C0I4 1608 aa9.69□□□□□ -0.86
SORL1-213ENST00000534754 TMEM88BA6NKF7 163 aa9.69□□□□□ -0.86
SORL1-213ENST00000534754 MGRN1O60291 552 aa9.69□□□□□ -0.86
SORL1-213ENST00000534754 CTNND1O60716 968 aaKnown RBP9.69□□□□□ -0.86
SORL1-213ENST00000534754 TECP42680 631 aa9.69□□□□□ -0.86
SORL1-213ENST00000534754 IREB2P48200 963 aaKnown RBP9.69□□□□□ -0.86
SORL1-213ENST00000534754 FKBP1BP68106 108 aa9.69□□□□□ -0.86
SORL1-213ENST00000534754 BYSLQ13895 437 aaKnown RBP9.69□□□□□ -0.86
SORL1-213ENST00000534754 GRM4Q14833 912 aa9.69□□□□□ -0.86
SORL1-213ENST00000534754 NONOQ15233 471 aaKnown RBP eCLIP9.69□□□□□ -0.86
SORL1-213ENST00000534754 IFI16Q16666 785 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms