RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 MCTP2Q6DN12 878 aa15.76■□□□□ 0.11
CCDC84-208ENST00000534656 ZNF746Q6NUN9 644 aaPredicted RBP15.76■□□□□ 0.11
CCDC84-208ENST00000534656 TRIM67Q6ZTA4 783 aa15.76■□□□□ 0.11
CCDC84-208ENST00000534656 THNSL1Q8IYQ7 743 aa15.76■□□□□ 0.11
CCDC84-208ENST00000534656 RASEFQ8IZ41 740 aa15.76■□□□□ 0.11
CCDC84-208ENST00000534656 PPP1R16BQ96T49 567 aa15.76■□□□□ 0.11
CCDC84-208ENST00000534656 ZNF577Q9BSK1 485 aa15.76■□□□□ 0.11
CCDC84-208ENST00000534656 PHF7Q9BWX1 381 aaPredicted RBP15.76■□□□□ 0.11
CCDC84-208ENST00000534656 CWH43Q9H720 699 aa15.76■□□□□ 0.11
CCDC84-208ENST00000534656 ATP6V0A4Q9HBG4 840 aa15.76■□□□□ 0.11
CCDC84-208ENST00000534656 HCSTQ9UBK5 93 aa15.76■□□□□ 0.11
CCDC84-208ENST00000534656 MUC6Q6W4X9 2439 aa15.76■□□□□ 0.11
CCDC84-208ENST00000534656 ESYT2A0FGR8 921 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 TMEM221A6NGB7 291 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 M0R296 226 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 FSCN2O14926 492 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 VTNP04004 478 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 FGFR1P11362 822 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 LAG3P18627 525 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 ADD1P35611 737 aaKnown RBP15.75■□□□□ 0.11
CCDC84-208ENST00000534656 ZXDAP98168 799 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 RBM10P98175 930 aaKnown RBP15.75■□□□□ 0.11
CCDC84-208ENST00000534656 SETQ01105 290 aaPredicted RBP15.75■□□□□ 0.11
CCDC84-208ENST00000534656 BMP2KLQ5H9B9 411 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 SMAP1Q8IYB5 467 aaPredicted RBP15.75■□□□□ 0.11
CCDC84-208ENST00000534656 METTL13Q8N6R0 699 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 VN1R2Q8NFZ6 395 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 ZMYND12Q9H0C1 365 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 LZTS1Q9Y250 596 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 PCDHA10Q9Y5I2 948 aa15.75■□□□□ 0.11
CCDC84-208ENST00000534656 FNDC1Q4ZHG4 1894 aaPredicted RBP15.75■□□□□ 0.11
CCDC84-208ENST00000534656 ADAMTS3O15072 1205 aa15.74■□□□□ 0.11
CCDC84-208ENST00000534656 PSAPP07602 524 aa15.74■□□□□ 0.11
CCDC84-208ENST00000534656 ATF7P17544 494 aaPredicted RBP15.74■□□□□ 0.11
CCDC84-208ENST00000534656 PLCB3Q01970 1234 aa15.74■□□□□ 0.11
CCDC84-208ENST00000534656 KRT32Q14532 448 aa15.74■□□□□ 0.11
CCDC84-208ENST00000534656 TRMT1LQ7Z2T5 733 aaKnown RBP15.74■□□□□ 0.11
CCDC84-208ENST00000534656 SUSD6Q92537 303 aa15.74■□□□□ 0.11
CCDC84-208ENST00000534656 PBXIP1Q96AQ6 731 aa15.74■□□□□ 0.11
CCDC84-208ENST00000534656 TMEM117Q9H0C3 514 aa15.74■□□□□ 0.11
CCDC84-208ENST00000534656 C6orf50Q9HD87 102 aa15.74■□□□□ 0.11
CCDC84-208ENST00000534656 NAP1L2Q9ULW6 460 aaPredicted RBP15.74■□□□□ 0.11
CCDC84-208ENST00000534656 CEP131Q9UPN4 1083 aa15.74■□□□□ 0.11
CCDC84-208ENST00000534656 TRIOO75962 3097 aa15.73■□□□□ 0.11
CCDC84-208ENST00000534656 CCDC196A0A1B0GTZ2 297 aa15.73■□□□□ 0.11
CCDC84-208ENST00000534656 MAGEB2O15479 319 aa15.73■□□□□ 0.11
CCDC84-208ENST00000534656 HMGB1P09429 215 aaKnown RBP15.73■□□□□ 0.11
CCDC84-208ENST00000534656 METAP2P50579 478 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCDC84-208ENST00000534656 CLCN3P51790 818 aa15.73■□□□□ 0.11
CCDC84-208ENST00000534656 KCNC3Q14003 757 aa15.73■□□□□ 0.11
CCDC84-208ENST00000534656 PKN1Q16512 942 aa15.73■□□□□ 0.11
CCDC84-208ENST00000534656 TMEM184AQ6ZMB5 413 aa15.73■□□□□ 0.11
CCDC84-208ENST00000534656 REXO1Q8N1G1 1221 aaKnown RBP15.73■□□□□ 0.11
CCDC84-208ENST00000534656 RASGRP4Q8TDF6 673 aa15.73■□□□□ 0.11
CCDC84-208ENST00000534656 CCDC12Q8WUD4 166 aaPredicted RBP15.73■□□□□ 0.11
CCDC84-208ENST00000534656 MRPS27Q92552 414 aaKnown RBP15.73■□□□□ 0.11
CCDC84-208ENST00000534656 RPGRIP1Q96KN7 1286 aa15.73■□□□□ 0.11
CCDC84-208ENST00000534656 CASD1Q96PB1 797 aa15.73■□□□□ 0.11
CCDC84-208ENST00000534656 GABBR1Q9UBS5 961 aa15.73■□□□□ 0.11
CCDC84-208ENST00000534656 TCEAL9Q9UHQ7 104 aa15.73■□□□□ 0.11
CCDC84-208ENST00000534656 PUF60Q9UHX1 559 aaKnown RBP15.73■□□□□ 0.11
CCDC84-208ENST00000534656 WDFY4Q6ZS81 3184 aa15.73■□□□□ 0.11
CCDC84-208ENST00000534656 HOXA2O43364 376 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 SRGAP2BP0DMP2 458 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 TMOD1P28289 359 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 CIITAP33076 1130 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 NLRP11P59045 1033 aaKnown RBP15.72■□□□□ 0.11
CCDC84-208ENST00000534656 APOBRQ0VD83 1088 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 PRR16Q569H4 304 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 PLPP4Q5VZY2 271 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 EFCAB12Q6NXP0 572 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 KCNT2Q6UVM3 1135 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 LRRC55Q6ZSA7 311 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 ZNF710Q8N1W2 664 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 LINC01465Q8N7H1 131 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 FAM167AQ96KS9 214 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 MAP7D2Q96T17 732 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 S1PR5Q9H228 398 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 ADAMTS10Q9H324 1103 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 NGRNQ9NPE2 291 aaKnown RBP15.72■□□□□ 0.11
CCDC84-208ENST00000534656 RNF19AQ9NV58 838 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 AKT3Q9Y243 479 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 SAMM50Q9Y512 469 aa15.72■□□□□ 0.11
CCDC84-208ENST00000534656 PRPF3O43395 683 aaKnown RBP15.71■□□□□ 0.11
CCDC84-208ENST00000534656 ZSCAN20P17040 1043 aaPredicted RBP15.71■□□□□ 0.11
CCDC84-208ENST00000534656 EIF4BP23588 611 aaKnown RBP15.71■□□□□ 0.11
CCDC84-208ENST00000534656 GNA11P29992 359 aa15.71■□□□□ 0.11
CCDC84-208ENST00000534656 TECP42680 631 aa15.71■□□□□ 0.11
CCDC84-208ENST00000534656 FGD1P98174 961 aa15.71■□□□□ 0.11
CCDC84-208ENST00000534656 IER5LQ5T953 404 aa15.71■□□□□ 0.11
CCDC84-208ENST00000534656 ANKRD54Q6NXT1 300 aa15.71■□□□□ 0.11
CCDC84-208ENST00000534656 ECHDC2Q86YB7 292 aa15.71■□□□□ 0.11
CCDC84-208ENST00000534656 SUGP1Q8IWZ8 645 aaKnown RBP15.71■□□□□ 0.11
CCDC84-208ENST00000534656 PRSS33Q8NF86 280 aa15.71■□□□□ 0.11
CCDC84-208ENST00000534656 LENG9Q96B70 501 aa15.71■□□□□ 0.11
CCDC84-208ENST00000534656 ZNF558Q96NG5 402 aa15.71■□□□□ 0.11
CCDC84-208ENST00000534656 TCF25Q9BQ70 676 aa15.71■□□□□ 0.11
CCDC84-208ENST00000534656 ENTPD7Q9NQZ7 604 aa15.71■□□□□ 0.11
CCDC84-208ENST00000534656 NRBP2Q9NSY0 501 aa15.71■□□□□ 0.11
CCDC84-208ENST00000534656 EVPLQ92817 2033 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms