RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 FAM13CQ8NE31 585 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 SSH3Q8TE77 659 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 CYB5D2Q8WUJ1 264 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 NSUN4Q96CB9 384 aaKnown RBP6.34□□□□□ -1.39
ATM-224ENST00000534625 ALPK1Q96QP1 1244 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 CPA4Q9UI42 421 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 AFG3L2Q9Y4W6 797 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 ZHX2Q9Y6X8 837 aa6.34□□□□□ -1.39
ATM-224ENST00000534625 DNAJC25-GNG10A0A024R161 153 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 A0A0G2JLL6 359 aaPredicted RBP6.33□□□□□ -1.4
ATM-224ENST00000534625 DNAJA2O60884 412 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 LRRN2O75325 713 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 MAP4K4O95819 1239 aaPredicted RBP6.33□□□□□ -1.4
ATM-224ENST00000534625 TSPAN15O95858 294 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 LDHCP07864 332 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 GLI1P08151 1106 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 ZSCAN22P10073 491 aaPredicted RBP6.33□□□□□ -1.4
ATM-224ENST00000534625 GBP2P32456 591 aaPredicted RBP6.33□□□□□ -1.4
ATM-224ENST00000534625 PSMC4P43686 418 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 FAM160A1Q05DH4 1040 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 PICALMQ13492 652 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 KIF22Q14807 665 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 SLC9C1Q4G0N8 1177 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 RALGPS1Q5JS13 557 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 GORABQ5T7V8 394 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 PRRT2Q7Z6L0 340 aaPredicted RBP6.33□□□□□ -1.4
ATM-224ENST00000534625 SCYL3Q8IZE3 742 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 FBXO27Q8NI29 283 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 KIRREL1Q96J84 757 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 GZF1Q9H116 711 aaPredicted RBP6.33□□□□□ -1.4
ATM-224ENST00000534625 GPR108Q9NPR9 543 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 RAI14Q9P0K7 980 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.33□□□□□ -1.4
ATM-224ENST00000534625 REV1Q9UBZ9 1251 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 VTI1BQ9UEU0 232 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 PTPRFP10586 1907 aa6.33□□□□□ -1.4
ATM-224ENST00000534625 PHIPQ8WWQ0 1821 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 DOCK2Q92608 1830 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 RBBP6Q7Z6E9 1792 aaKnown RBP6.32□□□□□ -1.4
ATM-224ENST00000534625 CHURC1-FNTBB4DL54 471 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 UQCRFS1P1P0C7P4 283 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 CYP2C8P10632 490 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 BUD31P41223 144 aaPredicted RBP6.32□□□□□ -1.4
ATM-224ENST00000534625 PRMT2P55345 433 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 ERVFC1P60507 584 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 GSTO1P78417 241 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 RRP1BQ14684 758 aaKnown RBP6.32□□□□□ -1.4
ATM-224ENST00000534625 TNNI3KQ59H18 835 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 SYDE1Q6ZW31 735 aaPredicted RBP6.32□□□□□ -1.4
ATM-224ENST00000534625 FASTKD5Q7L8L6 764 aaKnown RBP6.32□□□□□ -1.4
ATM-224ENST00000534625 TMPRSS7Q7RTY8 843 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 SIAH1Q8IUQ4 282 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 RELL1Q8IUW5 271 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 SLFN12Q8IYM2 578 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 DTWD2Q8NBA8 298 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 SH3RF3Q8TEJ3 882 aaPredicted RBP6.32□□□□□ -1.4
ATM-224ENST00000534625 SH3TC2Q8TF17 1288 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 PARK7Q99497 189 aaKnown RBP6.32□□□□□ -1.4
ATM-224ENST00000534625 GPR62Q9BZJ7 368 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 OSBPL5Q9H0X9 879 aaPredicted RBP6.32□□□□□ -1.4
ATM-224ENST00000534625 SLAMF8Q9P0V8 285 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 LRP2BPQ9P2M1 347 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 SRRDQ9UH36 339 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 NOP58Q9Y2X3 529 aaKnown RBP6.32□□□□□ -1.4
ATM-224ENST00000534625 FPGT-TNNI3KV9GXZ4 949 aa6.32□□□□□ -1.4
ATM-224ENST00000534625 MYO5AQ9Y4I1 1855 aaKnown RBP6.31□□□□□ -1.4
ATM-224ENST00000534625 COL2A1P02458 1487 aaPredicted RBP6.31□□□□□ -1.4
ATM-224ENST00000534625 TRIM75PA6NK02 468 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 SURF6O75683 361 aaKnown RBP6.31□□□□□ -1.4
ATM-224ENST00000534625 HTR3BO95264 441 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 BPNT1O95861 308 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 ERCC3P19447 782 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 HOXD10P28358 340 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 TPP2P29144 1249 aaPredicted RBP6.31□□□□□ -1.4
ATM-224ENST00000534625 YARSP54577 528 aaKnown RBP6.31□□□□□ -1.4
ATM-224ENST00000534625 SLC4A8Q2Y0W8 1093 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 CCDC158Q5M9N0 1113 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 TTC39AQ5SRH9 613 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 GADL1Q6ZQY3 521 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 PRR23BQ6ZRT6 265 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 ERMP1Q7Z2K6 904 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 ADGRA1Q86SQ6 560 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 ITPRIPQ8IWB1 547 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 TEX11Q8IYF3 940 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 GOLM1Q8NBJ4 401 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 BAHD1Q8TBE0 780 aaPredicted RBP6.31□□□□□ -1.4
ATM-224ENST00000534625 ZNF512BQ96KM6 892 aaPredicted RBP6.31□□□□□ -1.4
ATM-224ENST00000534625 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.31□□□□□ -1.4
ATM-224ENST00000534625 SP110Q9HB58 689 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 DBNLQ9UJU6 430 aaKnown RBP6.31□□□□□ -1.4
ATM-224ENST00000534625 SLC45A1Q9Y2W3 748 aa6.31□□□□□ -1.4
ATM-224ENST00000534625 DOCK1Q14185 1865 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 MYPNQ86TC9 1320 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 RANBP2P49792 3224 aaKnown RBP6.3□□□□□ -1.4
ATM-224ENST00000534625 MINDY4BA8MYZ0 360 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 PRKCZQ05513 592 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 SPP2Q13103 211 aa6.3□□□□□ -1.4
ATM-224ENST00000534625 OS9Q13438 667 aaPredicted RBP6.3□□□□□ -1.4
ATM-224ENST00000534625 MPP2Q14168 576 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms