RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	FSTL4	Q6MZW2	842 aa		6.29	□□□□□ -1.4
ATM-223	ENST00000533979	LRSAM1	Q6UWE0	723 aa		6.29	□□□□□ -1.4
ATM-223	ENST00000533979		Q8TCH9	128 aa		6.29	□□□□□ -1.4
ATM-223	ENST00000533979	E2F7	Q96AV8	911 aa		6.29	□□□□□ -1.4
ATM-223	ENST00000533979	FOXRED1	Q96CU9	486 aa	Predicted RBP	6.29	□□□□□ -1.4
ATM-223	ENST00000533979	NEIL1	Q96FI4	390 aa	Predicted RBP	6.29	□□□□□ -1.4
ATM-223	ENST00000533979	CDK5RAP1	Q96SZ6	601 aa	Known RBP	6.29	□□□□□ -1.4
ATM-223	ENST00000533979	MEGF9	Q9H1U4	602 aa		6.29	□□□□□ -1.4
ATM-223	ENST00000533979	CABP5	Q9NP86	173 aa		6.29	□□□□□ -1.4
ATM-223	ENST00000533979	CHPF2	Q9P2E5	772 aa		6.29	□□□□□ -1.4
ATM-223	ENST00000533979	PTPN22	Q9Y2R2	807 aa		6.29	□□□□□ -1.4
ATM-223	ENST00000533979	TPD52L2	O43399	206 aa	Known RBP	6.28	□□□□□ -1.4
ATM-223	ENST00000533979	SDS	P20132	328 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	APEX1	P27695	318 aa	Known RBP	6.28	□□□□□ -1.4
ATM-223	ENST00000533979	FNTB	P49356	437 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	PABPC4	Q13310	644 aa	Known RBP eCLIP	6.28	□□□□□ -1.4
ATM-223	ENST00000533979	NFYC	Q13952	458 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	ZNF568	Q3ZCX4	644 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	CDCA2	Q69YH5	1023 aa	Predicted RBP	6.28	□□□□□ -1.4
ATM-223	ENST00000533979	TMEM200B	Q69YZ2	307 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	USP30	Q70CQ3	517 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	TAX1BP1	Q86VP1	789 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	KIF18B	Q86Y91	864 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	CHST14	Q8NCH0	376 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	WWC2-AS2	Q96NR7	200 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	PSMD1	Q99460	953 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	ORAI3	Q9BRQ5	295 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	KLC2	Q9H0B6	622 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	TMX1	Q9H3N1	280 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	MAGEC2	Q9UBF1	373 aa	Predicted RBP	6.28	□□□□□ -1.4
ATM-223	ENST00000533979	B4GALT6	Q9UBX8	382 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	JAG2	Q9Y219	1238 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	TSC22D4	Q9Y3Q8	395 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	TESMIN	Q9Y4I5	508 aa		6.28	□□□□□ -1.4
ATM-223	ENST00000533979	PTPDC1	A2A3K4	754 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	DVL2	O14641	736 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	GLRX3	O76003	335 aa	Known RBP	6.27	□□□□□ -1.41
ATM-223	ENST00000533979	HMGCR	P04035	888 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	KCNQ1	P51787	676 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	ALDH6A1	Q02252	535 aa	Known RBP	6.27	□□□□□ -1.41
ATM-223	ENST00000533979	RNF151	Q2KHN1	245 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	CFAP100	Q494V2	611 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	GRAMD4	Q6IC98	578 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	TCTN3	Q6NUS6	607 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	LARP4	Q71RC2	724 aa	Known RBP eCLIP	6.27	□□□□□ -1.41
ATM-223	ENST00000533979	OTOP2	Q7RTS6	562 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	RTN4RL1	Q86UN2	441 aa	Predicted RBP	6.27	□□□□□ -1.41
ATM-223	ENST00000533979	HOMER1	Q86YM7	354 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	STAG1	Q8WVM7	1258 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	FOXB1	Q99853	325 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	MYH16	Q9H6N6	1097 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	MSL2	Q9HCI7	577 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	DDX56	Q9NY93	547 aa	Known RBP	6.27	□□□□□ -1.41
ATM-223	ENST00000533979	CDC42EP3	Q9UKI2	254 aa		6.27	□□□□□ -1.41
ATM-223	ENST00000533979	PMS2P1	A4D2B8	440 aa		6.26	□□□□□ -1.41
ATM-223	ENST00000533979	CBX4	O00257	560 aa		6.26	□□□□□ -1.41
ATM-223	ENST00000533979	CDC45	O75419	566 aa		6.26	□□□□□ -1.41
ATM-223	ENST00000533979	CR2	P20023	1033 aa		6.26	□□□□□ -1.41
ATM-223	ENST00000533979	ADCY8	P40145	1251 aa		6.26	□□□□□ -1.41
ATM-223	ENST00000533979	KIF11	P52732	1056 aa		6.26	□□□□□ -1.41
ATM-223	ENST00000533979	AMPD3	Q01432	767 aa		6.26	□□□□□ -1.41
ATM-223	ENST00000533979	PUM1	Q14671	1186 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
ATM-223	ENST00000533979	NOLC1	Q14978	699 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
ATM-223	ENST00000533979	ZNF174	Q15697	407 aa		6.26	□□□□□ -1.41
ATM-223	ENST00000533979	C16orf86	Q6ZW13	317 aa		6.26	□□□□□ -1.41
ATM-223	ENST00000533979	NME9	Q86XW9	330 aa		6.26	□□□□□ -1.41
ATM-223	ENST00000533979	GIMAP8	Q8ND71	665 aa	Predicted RBP	6.26	□□□□□ -1.41
ATM-223	ENST00000533979	GNRHR2	Q96P88	292 aa		6.26	□□□□□ -1.41
ATM-223	ENST00000533979	LRRC37B	Q96QE4	947 aa		6.26	□□□□□ -1.41
ATM-223	ENST00000533979	SLK	Q9H2G2	1235 aa	Predicted RBP	6.26	□□□□□ -1.41
ATM-223	ENST00000533979	ZFR2	Q9UPR6	939 aa	Known RBP	6.26	□□□□□ -1.41
ATM-223	ENST00000533979	VWA7	Q9Y334	891 aa		6.26	□□□□□ -1.41
ATM-223	ENST00000533979	CCDC194	A0A1B0GVG4	234 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	ARHGAP6	O43182	974 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	FOXS1	O43638	330 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	MAP4K4	O95819	1239 aa	Predicted RBP	6.25	□□□□□ -1.41
ATM-223	ENST00000533979	JMJD7	P0C870	316 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	POU3F2	P20265	443 aa	Predicted RBP	6.25	□□□□□ -1.41
ATM-223	ENST00000533979	MEOX1	P50221	254 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	ZNF460	Q14592	562 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	PCOLCE	Q15113	449 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	HS1BP3	Q53T59	392 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	GORAB	Q5T7V8	394 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	PIK3R6	Q5UE93	754 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	EXOC8	Q8IYI6	725 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	FAM9A	Q8IZU1	332 aa	Predicted RBP	6.25	□□□□□ -1.41
ATM-223	ENST00000533979	APPBP2	Q92624	585 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	ERCC4	Q92889	916 aa	Predicted RBP	6.25	□□□□□ -1.41
ATM-223	ENST00000533979	MAML3	Q96JK9	1138 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	C16orf92	Q96LL3	132 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	OR10A2	Q9H208	303 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	FANCL	Q9NW38	375 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	NR2E1	Q9Y466	385 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979	TCAF1	Q9Y4C2	921 aa		6.25	□□□□□ -1.41
ATM-223	ENST00000533979		H7C1D1	291 aa		6.24	□□□□□ -1.41
ATM-223	ENST00000533979	KRT37	O76014	449 aa		6.24	□□□□□ -1.41
ATM-223	ENST00000533979	S100B	P04271	92 aa	Predicted RBP	6.24	□□□□□ -1.41
ATM-223	ENST00000533979	MRE11	P49959	708 aa		6.24	□□□□□ -1.41
ATM-223	ENST00000533979	RRAD	P55042	308 aa		6.24	□□□□□ -1.41
ATM-223	ENST00000533979	ADCY1	Q08828	1119 aa		6.24	□□□□□ -1.41

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