RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 IFIH1Q9BYX4 1025 aaKnown RBP14.98□□□□□ -0.01
CMTM1-219ENST00000533953 LRWD1Q9UFC0 647 aa14.98□□□□□ -0.01
CMTM1-219ENST00000533953 YBX2Q9Y2T7 364 aaKnown RBP14.98□□□□□ -0.01
CMTM1-219ENST00000533953 NOC2LQ9Y3T9 749 aaKnown RBP14.98□□□□□ -0.01
CMTM1-219ENST00000533953 CLIC4Q9Y696 253 aa14.98□□□□□ -0.01
CMTM1-219ENST00000533953 IGKV6-21A0A0C4DH24 114 aa14.97□□□□□ -0.01
CMTM1-219ENST00000533953 M0QZ92 97 aa14.97□□□□□ -0.01
CMTM1-219ENST00000533953 MAFO75444 373 aaPredicted RBP14.97□□□□□ -0.01
CMTM1-219ENST00000533953 IBSPP21815 317 aaPredicted RBP14.97□□□□□ -0.01
CMTM1-219ENST00000533953 FGFR4P22455 802 aa14.97□□□□□ -0.01
CMTM1-219ENST00000533953 CCT6AP40227 531 aaKnown RBP14.97□□□□□ -0.01
CMTM1-219ENST00000533953 FXR2P51116 673 aaKnown RBP eCLIP14.97□□□□□ -0.01
CMTM1-219ENST00000533953 ATP2C1P98194 919 aaPredicted RBP14.97□□□□□ -0.01
CMTM1-219ENST00000533953 GRIN1Q05586 938 aa14.97□□□□□ -0.01
CMTM1-219ENST00000533953 SF3A1Q15459 793 aaKnown RBP14.97□□□□□ -0.01
CMTM1-219ENST00000533953 FOXD4L6Q3SYB3 417 aaPredicted RBP14.97□□□□□ -0.01
CMTM1-219ENST00000533953 FOXD4L3Q6VB84 417 aaPredicted RBP14.97□□□□□ -0.01
CMTM1-219ENST00000533953 DTHD1Q6ZMT9 781 aa14.97□□□□□ -0.01
CMTM1-219ENST00000533953 BRAPQ7Z569 592 aa14.97□□□□□ -0.01
CMTM1-219ENST00000533953 RTN4RL1Q86UN2 441 aaPredicted RBP14.97□□□□□ -0.01
CMTM1-219ENST00000533953 PLIN2Q99541 437 aa14.97□□□□□ -0.01
CMTM1-219ENST00000533953 MTIF3Q9H2K0 278 aaKnown RBP14.97□□□□□ -0.01
CMTM1-219ENST00000533953 ADAMTS10Q9H324 1103 aa14.97□□□□□ -0.01
CMTM1-219ENST00000533953 POLD4Q9HCU8 107 aa14.97□□□□□ -0.01
CMTM1-219ENST00000533953 SUCLA2Q9P2R7 463 aaPredicted RBP14.97□□□□□ -0.01
CMTM1-219ENST00000533953 PADI3Q9ULW8 664 aa14.97□□□□□ -0.01
CMTM1-219ENST00000533953 ABHD14A-ACY1A0A1B0GW23 586 aa14.96□□□□□ -0.01
CMTM1-219ENST00000533953 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.96□□□□□ -0.01
CMTM1-219ENST00000533953 VWA3AA6NCI4 1184 aa14.96□□□□□ -0.01
CMTM1-219ENST00000533953 DKC1O60832 514 aaKnown RBP eCLIP14.96□□□□□ -0.01
CMTM1-219ENST00000533953 ARHGEF15O94989 841 aa14.96□□□□□ -0.01
CMTM1-219ENST00000533953 SMAD3P84022 425 aaKnown RBP14.96□□□□□ -0.01
CMTM1-219ENST00000533953 NFX1Q12986 1120 aaKnown RBP14.96□□□□□ -0.01
CMTM1-219ENST00000533953 ZRSR1Q15695 479 aaKnown RBP14.96□□□□□ -0.01
CMTM1-219ENST00000533953 MAEAQ7L5Y9 396 aa14.96□□□□□ -0.01
CMTM1-219ENST00000533953 OTUD6AQ7L8S5 288 aa14.96□□□□□ -0.01
CMTM1-219ENST00000533953 IGSF22Q8N9C0 903 aa14.96□□□□□ -0.01
CMTM1-219ENST00000533953 MAP7D2Q96T17 732 aa14.96□□□□□ -0.01
CMTM1-219ENST00000533953 NKX2-4Q9H2Z4 354 aa14.96□□□□□ -0.01
CMTM1-219ENST00000533953 TMX1Q9H3N1 280 aa14.96□□□□□ -0.01
CMTM1-219ENST00000533953 KAT6AQ92794 2004 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 ENPP3O14638 875 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 BAIAP3O94812 1187 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 UPP2O95045 317 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 LYPLA2O95372 231 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 DNAJB2P25686 324 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 TMOD1P28289 359 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 KCNJ6P48051 423 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 RARRES1P49788 294 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 GPC3P51654 580 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 CRYBB1P53674 252 aaPredicted RBP14.95□□□□□ -0.02
CMTM1-219ENST00000533953 POLGP54098 1239 aaPredicted RBP14.95□□□□□ -0.02
CMTM1-219ENST00000533953 PDIA5Q14554 519 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 TSHZ1Q6ZSZ6 1077 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 SPRED2Q7Z698 418 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 RHPN2Q8IUC4 686 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 HERC6Q8IVU3 1022 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 MYOCDQ8IZQ8 938 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 ERMNQ8TAM6 284 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 NEK9Q8TD19 979 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 SNX29Q8TEQ0 813 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 LINC01599Q8WXQ3 324 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 MMTAG2Q9BU76 263 aaKnown RBP14.95□□□□□ -0.02
CMTM1-219ENST00000533953 POLR3CQ9BUI4 534 aaPredicted RBP14.95□□□□□ -0.02
CMTM1-219ENST00000533953 TTYH1Q9H313 450 aaPredicted RBP14.95□□□□□ -0.02
CMTM1-219ENST00000533953 DHX33Q9H6R0 707 aaKnown RBP14.95□□□□□ -0.02
CMTM1-219ENST00000533953 TUFT1Q9NNX1 390 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 XPNPEP1Q9NQW7 623 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 TFIP11Q9UBB9 837 aaKnown RBP14.95□□□□□ -0.02
CMTM1-219ENST00000533953 KIAA1024Q9UPX6 916 aa14.95□□□□□ -0.02
CMTM1-219ENST00000533953 LAMA3Q16787 3333 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 A0A087WZ62 844 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 LCHNA4D1U4 455 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 MGEA5O60502 916 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 RPS6KA5O75582 802 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 RPA1P27694 616 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 MARCKSP29966 332 aaPredicted RBP14.94□□□□□ -0.02
CMTM1-219ENST00000533953 PRPHP41219 470 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 PAK2Q13177 524 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 EMC2Q15006 297 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 PTPAQ15257 358 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 KCNK18Q7Z418 384 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 FAM228AQ86W67 206 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 DEFB123Q8N688 67 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 PRPF31Q8WWY3 499 aaKnown RBP14.94□□□□□ -0.02
CMTM1-219ENST00000533953 NLRP7Q8WX94 980 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 SLC7A3Q8WY07 619 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 TIFAQ96CG3 184 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 CHAMP1Q96JM3 812 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 NLRP4Q96MN2 994 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 SCLT1Q96NL6 688 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 USP28Q96RU2 1077 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 FDXACB1Q9BRP7 624 aaPredicted RBP14.94□□□□□ -0.02
CMTM1-219ENST00000533953 ERVK-5Q9HDB9 667 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 GPRC5CQ9NQ84 441 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 ANKEF1Q9NU02 776 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 DDX19AQ9NUU7 478 aaKnown RBP14.94□□□□□ -0.02
CMTM1-219ENST00000533953 DAXXQ9UER7 740 aaPredicted RBP14.94□□□□□ -0.02
CMTM1-219ENST00000533953 ST3GAL5Q9UNP4 418 aa14.94□□□□□ -0.02
CMTM1-219ENST00000533953 TANC1Q9C0D5 1861 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms