RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 SEMA6BQ9H3T3 888 aa14.97□□□□□ -0.01
CAPN1-227ENST00000533909 CYP26B1Q9NR63 512 aa14.97□□□□□ -0.01
CAPN1-227ENST00000533909 PPME1Q9Y570 386 aa14.97□□□□□ -0.01
CAPN1-227ENST00000533909 SQORQ9Y6N5 450 aa14.97□□□□□ -0.01
CAPN1-227ENST00000533909 KDM3AQ9Y4C1 1321 aa14.96□□□□□ -0.01
CAPN1-227ENST00000533909 LAD1O00515 517 aa14.96□□□□□ -0.01
CAPN1-227ENST00000533909 UPP2O95045 317 aa14.96□□□□□ -0.01
CAPN1-227ENST00000533909 SLC34A2O95436 690 aa14.96□□□□□ -0.01
CAPN1-227ENST00000533909 CRYBB1P53674 252 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-227ENST00000533909 NLRP11P59045 1033 aaKnown RBP14.96□□□□□ -0.01
CAPN1-227ENST00000533909 CDC42EP1Q00587 391 aa14.96□□□□□ -0.01
CAPN1-227ENST00000533909 NFX1Q12986 1120 aaKnown RBP14.96□□□□□ -0.01
CAPN1-227ENST00000533909 PTGDRQ13258 359 aa14.96□□□□□ -0.01
CAPN1-227ENST00000533909 TARBP2Q15633 366 aaKnown RBP14.96□□□□□ -0.01
CAPN1-227ENST00000533909 TCTN1Q2MV58 587 aa14.96□□□□□ -0.01
CAPN1-227ENST00000533909 OSMRQ99650 979 aa14.96□□□□□ -0.01
CAPN1-227ENST00000533909 ZNF576Q9H609 170 aa14.96□□□□□ -0.01
CAPN1-227ENST00000533909 PADI3Q9ULW8 664 aa14.96□□□□□ -0.01
CAPN1-227ENST00000533909 PCDHB6Q9Y5E3 794 aa14.96□□□□□ -0.01
CAPN1-227ENST00000533909 WDR81Q562E7 1941 aa14.96□□□□□ -0.02
CAPN1-227ENST00000533909 DENND3A2RUS2 1198 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 GPR182O15218 404 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 MAFO75444 373 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-227ENST00000533909 SLITRK3O94933 977 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 CA3P07451 260 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 MYOGP15173 224 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 RFC5P40937 340 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 TOB1P50616 345 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-227ENST00000533909 NPEPPSP55786 919 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 HAUS3Q68CZ6 603 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.95□□□□□ -0.02
CAPN1-227ENST00000533909 BRAPQ7Z569 592 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 TMCO2Q7Z6W1 182 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-227ENST00000533909 SNX21Q969T3 373 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 HSD17B14Q9BPX1 270 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 OSBPL7Q9BZF2 842 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 AGO3Q9H9G7 860 aaKnown RBP14.95□□□□□ -0.02
CAPN1-227ENST00000533909 MTMR10Q9NXD2 777 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 SUCLA2Q9P2R7 463 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-227ENST00000533909 LRWD1Q9UFC0 647 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 YBX2Q9Y2T7 364 aaKnown RBP14.95□□□□□ -0.02
CAPN1-227ENST00000533909 STK24Q9Y6E0 443 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 EVPLQ92817 2033 aa14.95□□□□□ -0.02
CAPN1-227ENST00000533909 STBD1O95210 358 aa14.94□□□□□ -0.02
CAPN1-227ENST00000533909 GJB5O95377 273 aa14.94□□□□□ -0.02
CAPN1-227ENST00000533909 IBSPP21815 317 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-227ENST00000533909 DTHD1Q6ZMT9 781 aa14.94□□□□□ -0.02
CAPN1-227ENST00000533909 FERMT3Q86UX7 667 aa14.94□□□□□ -0.02
CAPN1-227ENST00000533909 RHPN2Q8IUC4 686 aa14.94□□□□□ -0.02
CAPN1-227ENST00000533909 YME1L1Q96TA2 773 aa14.94□□□□□ -0.02
CAPN1-227ENST00000533909 RAD9AQ99638 391 aa14.94□□□□□ -0.02
CAPN1-227ENST00000533909 GCOM2Q9BZD3 368 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-227ENST00000533909 TTYH1Q9H313 450 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-227ENST00000533909 TUFT1Q9NNX1 390 aa14.94□□□□□ -0.02
CAPN1-227ENST00000533909 BMP2KQ9NSY1 1161 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-227ENST00000533909 ANKEF1Q9NU02 776 aa14.94□□□□□ -0.02
CAPN1-227ENST00000533909 WRAP73Q9P2S5 460 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-227ENST00000533909 NOC2LQ9Y3T9 749 aaKnown RBP14.94□□□□□ -0.02
CAPN1-227ENST00000533909 GAS2O43903 313 aaKnown RBP14.93□□□□□ -0.02
CAPN1-227ENST00000533909 GPR32O75388 356 aa14.93□□□□□ -0.02
CAPN1-227ENST00000533909 LYPLA2O95372 231 aa14.93□□□□□ -0.02
CAPN1-227ENST00000533909 CCT6AP40227 531 aaKnown RBP14.93□□□□□ -0.02
CAPN1-227ENST00000533909 FXR2P51116 673 aaKnown RBP eCLIP14.93□□□□□ -0.02
CAPN1-227ENST00000533909 GPC3P51654 580 aa14.93□□□□□ -0.02
CAPN1-227ENST00000533909 EMC2Q15006 297 aa14.93□□□□□ -0.02
CAPN1-227ENST00000533909 FAM43BQ6ZT52 329 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-227ENST00000533909 TCP11Q8WWU5 503 aa14.93□□□□□ -0.02
CAPN1-227ENST00000533909 PSPC1Q8WXF1 523 aaKnown RBP14.93□□□□□ -0.02
CAPN1-227ENST00000533909 ZNF668Q96K58 619 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-227ENST00000533909 NLRP4Q96MN2 994 aa14.93□□□□□ -0.02
CAPN1-227ENST00000533909 NACC1Q96RE7 527 aa14.93□□□□□ -0.02
CAPN1-227ENST00000533909 GAS2L1Q99501 681 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-227ENST00000533909 POLR3CQ9BUI4 534 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-227ENST00000533909 CDHR5Q9HBB8 845 aa14.93□□□□□ -0.02
CAPN1-227ENST00000533909 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.93□□□□□ -0.02
CAPN1-227ENST00000533909 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-227ENST00000533909 LRFN2Q9ULH4 789 aa14.93□□□□□ -0.02
CAPN1-227ENST00000533909 ST3GAL5Q9UNP4 418 aa14.93□□□□□ -0.02
CAPN1-227ENST00000533909 INSL6Q9Y581 213 aa14.93□□□□□ -0.02
CAPN1-227ENST00000533909 ENPP3O14638 875 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 BMP15O95972 392 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 FOSL2P15408 326 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 SYT1P21579 422 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 EIF4BP23588 611 aaKnown RBP14.92□□□□□ -0.02
CAPN1-227ENST00000533909 PRPHP41219 470 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 PDIA5Q14554 519 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 KRT79Q5XKE5 535 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 CATSPER3Q86XQ3 398 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 LINC01465Q8N7H1 131 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 SNX29Q8TEQ0 813 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 PIGOQ8TEQ8 1089 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 TOP1MTQ969P6 601 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 CDX2Q99626 313 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-227ENST00000533909 MTRQ99707 1265 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 INO80BQ9C086 356 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-227ENST00000533909 ADAMTS10Q9H324 1103 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 ATP6V0A4Q9HBG4 840 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 MICAL3Q7RTP6 2002 aa14.92□□□□□ -0.02
CAPN1-227ENST00000533909 IGKV6-21A0A0C4DH24 114 aa14.91□□□□□ -0.02
CAPN1-227ENST00000533909 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms