RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 LINC01465Q8N7H1 131 aa16.26■□□□□ 0.19
SF3B2-214ENST00000533595 CALML4Q96GE6 196 aa16.26■□□□□ 0.19
SF3B2-214ENST00000533595 SCLYQ96I15 445 aa16.26■□□□□ 0.19
SF3B2-214ENST00000533595 MAP7D2Q96T17 732 aa16.26■□□□□ 0.19
SF3B2-214ENST00000533595 NT5C3AQ9H0P0 336 aa16.26■□□□□ 0.19
SF3B2-214ENST00000533595 DHX33Q9H6R0 707 aaKnown RBP16.26■□□□□ 0.19
SF3B2-214ENST00000533595 RCOR1Q9UKL0 485 aa16.26■□□□□ 0.19
SF3B2-214ENST00000533595 DNM3Q9UQ16 869 aa16.26■□□□□ 0.19
SF3B2-214ENST00000533595 IGKV6-21A0A0C4DH24 114 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 PARNO95453 639 aaKnown RBP16.25■□□□□ 0.19
SF3B2-214ENST00000533595 RFC2P35250 354 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 TXLNAP40222 546 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 ME1P48163 572 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 DNM2P50570 870 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 MRPS6P82932 125 aaKnown RBP16.25■□□□□ 0.19
SF3B2-214ENST00000533595 GRB10Q13322 594 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 PPIGQ13427 754 aaKnown RBP eCLIP16.25■□□□□ 0.191e-7■■□□□ 13
SF3B2-214ENST00000533595 FAM26DQ5JW98 314 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 SPECC1Q5M775 1068 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 IER5Q5VY09 327 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 TRAF7Q6Q0C0 670 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 KCTD17Q8N5Z5 321 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 RASSF8Q8NHQ8 419 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 EPSTI1Q96J88 318 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 CHAMP1Q96JM3 812 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 IPO9Q96P70 1041 aaKnown RBP16.25■□□□□ 0.19
SF3B2-214ENST00000533595 PNMA5Q96PV4 448 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 GDF15Q99988 308 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 CCSER1Q9C0I3 900 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 CHMP5Q9NZZ3 219 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 TANC1Q9C0D5 1861 aa16.25■□□□□ 0.19
SF3B2-214ENST00000533595 ARID2Q68CP9 1835 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 ARHGEF35A5YM69 484 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 M0QZ92 97 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 GAS2O43903 313 aaKnown RBP16.24■□□□□ 0.19
SF3B2-214ENST00000533595 CUTAO60888 179 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 DGAT1O75907 488 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 EYA4O95677 639 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 CHRNA1P02708 482 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 TMEM62Q0P6H9 643 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 EMC2Q15006 297 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 TMEM119Q4V9L6 283 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 USP49Q70CQ1 688 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 RPUSD2Q8IZ73 545 aaKnown RBP16.24■□□□□ 0.19
SF3B2-214ENST00000533595 LEO1Q8WVC0 666 aaPredicted RBP16.24■□□□□ 0.19
SF3B2-214ENST00000533595 SYMPKQ92797 1274 aaKnown RBP16.24■□□□□ 0.19
SF3B2-214ENST00000533595 SPATA32Q96LK8 384 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 PLIN2Q99541 437 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 SCAND2PQ9GZW5 306 aaPredicted RBP16.24■□□□□ 0.19
SF3B2-214ENST00000533595 BHMT2Q9H2M3 363 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 AKT3Q9Y243 479 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 CDY2AQ9Y6F7 541 aa16.24■□□□□ 0.19
SF3B2-214ENST00000533595 E9PMD0 336 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 USO1O60763 962 aaKnown RBP16.23■□□□□ 0.19
SF3B2-214ENST00000533595 VTNP04004 478 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 MGAT3Q09327 533 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 MKRN4PQ13434 485 aaPredicted RBP16.23■□□□□ 0.19
SF3B2-214ENST00000533595 DRP2Q13474 957 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 MBTPS1Q14703 1052 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 KARSQ15046 597 aaKnown RBP16.23■□□□□ 0.19
SF3B2-214ENST00000533595 PADI6Q6TGC4 694 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 KCNK18Q7Z418 384 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 DEFB128Q7Z7B8 93 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 ZNF710Q8N1W2 664 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 MTRQ99707 1265 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 CELF4Q9BZC1 486 aaKnown RBP16.23■□□□□ 0.19
SF3B2-214ENST00000533595 UBE2OQ9C0C9 1292 aaKnown RBP16.23■□□□□ 0.19
SF3B2-214ENST00000533595 ATP6V0A4Q9HBG4 840 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 IL23AQ9NPF7 189 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 BMP2KQ9NSY1 1161 aaPredicted RBP16.23■□□□□ 0.19
SF3B2-214ENST00000533595 SUCLA2Q9P2R7 463 aaPredicted RBP16.23■□□□□ 0.19
SF3B2-214ENST00000533595 CCDC39Q9UFE4 941 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 PCDHA7Q9UN72 937 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 TRPV2Q9Y5S1 764 aa16.23■□□□□ 0.19
SF3B2-214ENST00000533595 TCHHQ07283 1943 aa16.22■□□□□ 0.19
SF3B2-214ENST00000533595 NBNO60934 754 aa16.22■□□□□ 0.19
SF3B2-214ENST00000533595 PFKMP08237 780 aa16.22■□□□□ 0.19
SF3B2-214ENST00000533595 ACRP10323 421 aa16.22■□□□□ 0.19
SF3B2-214ENST00000533595 PLCG1P19174 1290 aa16.22■□□□□ 0.19
SF3B2-214ENST00000533595 CDC42EP1Q00587 391 aa16.22■□□□□ 0.19
SF3B2-214ENST00000533595 GPNMBQ14956 572 aa16.22■□□□□ 0.19
SF3B2-214ENST00000533595 AXDND1Q5T1B0 1012 aaPredicted RBP16.22■□□□□ 0.19
SF3B2-214ENST00000533595 CHRDL2Q6WN34 429 aa16.22■□□□□ 0.19
SF3B2-214ENST00000533595 TCP11Q8WWU5 503 aa16.22■□□□□ 0.19
SF3B2-214ENST00000533595 TMEM143Q96AN5 459 aa16.22■□□□□ 0.19
SF3B2-214ENST00000533595 XPNPEP1Q9NQW7 623 aa16.22■□□□□ 0.19
SF3B2-214ENST00000533595 GINS2Q9Y248 185 aa16.22■□□□□ 0.19
SF3B2-214ENST00000533595 SCN5AQ14524 2016 aa16.22■□□□□ 0.19
SF3B2-214ENST00000533595 LOXHD1Q8IVV2 1947 aa16.21■□□□□ 0.19
SF3B2-214ENST00000533595 CXCL10P02778 98 aa16.21■□□□□ 0.19
SF3B2-214ENST00000533595 BMP8BP34820 402 aa16.21■□□□□ 0.19
SF3B2-214ENST00000533595 EPHB4P54760 987 aa16.21■□□□□ 0.19
SF3B2-214ENST00000533595 NLRP11P59045 1033 aaKnown RBP16.21■□□□□ 0.19
SF3B2-214ENST00000533595 KIZQ2M2Z5 673 aa16.21■□□□□ 0.19
SF3B2-214ENST00000533595 C16orf59Q7L2K0 433 aa16.21■□□□□ 0.19
SF3B2-214ENST00000533595 MCPH1Q8NEM0 835 aa16.21■□□□□ 0.19
SF3B2-214ENST00000533595 PSPC1Q8WXF1 523 aaKnown RBP16.21■□□□□ 0.19
SF3B2-214ENST00000533595 PPP1R16BQ96T49 567 aa16.21■□□□□ 0.19
SF3B2-214ENST00000533595 GPR32O75388 356 aa16.2■□□□□ 0.18
SF3B2-214ENST00000533595 SSBP05455 408 aaKnown RBP eCLIP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms