RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 VTNP04004 478 aa14□□□□□ -0.17
CAPRIN1-213ENST00000533562 ERICH6BQ5W0A0 696 aa14□□□□□ -0.17
CAPRIN1-213ENST00000533562 EP400NLQ6ZTU2 488 aa14□□□□□ -0.17
CAPRIN1-213ENST00000533562 DAGLBQ8NCG7 672 aa14□□□□□ -0.17
CAPRIN1-213ENST00000533562 OSMRQ99650 979 aa14□□□□□ -0.17
CAPRIN1-213ENST00000533562 C1QTNF1Q9BXJ1 281 aa14□□□□□ -0.17
CAPRIN1-213ENST00000533562 SLKQ9H2G2 1235 aaPredicted RBP14□□□□□ -0.17
CAPRIN1-213ENST00000533562 PLAGL2Q9UPG8 496 aa14□□□□□ -0.17
CAPRIN1-213ENST00000533562 AKT3Q9Y243 479 aa14□□□□□ -0.17
CAPRIN1-213ENST00000533562 FAM50BQ9Y247 325 aa14□□□□□ -0.17
CAPRIN1-213ENST00000533562 MRPL42Q9Y6G3 142 aaKnown RBP14□□□□□ -0.17
CAPRIN1-213ENST00000533562 RALGAPA2Q2PPJ7 1873 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 M0R2N6 131 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 GRM6O15303 877 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 EIF5BO60841 1220 aaKnown RBP13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 PSMD10O75832 226 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 IBSPP21815 317 aaPredicted RBP13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 NLRP11P59045 1033 aaKnown RBP13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 ANAPC15P60006 121 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 CDC42EP1Q00587 391 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 PRKCEQ02156 737 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 NONOQ15233 471 aaKnown RBP eCLIP13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 ANKRD1Q15327 319 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 PAN2Q504Q3 1202 aaKnown RBP13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 PTCRAQ6ISU1 281 aaPredicted RBP13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 MOXD1Q6UVY6 613 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 MIER3Q7Z3K6 550 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 KRT25Q7Z3Z0 450 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 NEK9Q8TD19 979 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 TMEM40Q8WWA1 233 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 PPP2R3CQ969Q6 453 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 PPP1R16BQ96T49 567 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 UNC45AQ9H3U1 944 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 ALG13Q9NP73 1137 aaKnown RBP13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 NLRC5Q86WI3 1866 aa13.99□□□□□ -0.17
CAPRIN1-213ENST00000533562 GRXCR2A6NFK2 248 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 ZNF862O60290 1169 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 MGEA5O60502 916 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 MMP1P03956 469 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 ZSCAN20P17040 1043 aaPredicted RBP13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 EIF4BP23588 611 aaKnown RBP13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 CLCN3P51790 818 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 TBC1D8BQ0IIM8 1120 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 SCRN1Q12765 414 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 COL19A1Q14993 1142 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 XKR3Q5GH77 459 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 SPOUT1Q5T280 376 aaKnown RBP13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 FAM228AQ86W67 206 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 AIFM3Q96NN9 605 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 AAASQ9NRG9 546 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 CLDND1Q9NY35 253 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 DDX25Q9UHL0 483 aaKnown RBP13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 PCDHB12Q9Y5F1 795 aa13.98□□□□□ -0.17
CAPRIN1-213ENST00000533562 CCDC194A0A1B0GVG4 234 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 C9IYK1 514 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 H3BQ06 376 aaPredicted RBP13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 PFKFB2O60825 505 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 TDP2O95551 362 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 DNM2P50570 870 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 FAM189BP81408 668 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 NPY5RQ15761 445 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 INF2Q27J81 1249 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 FAM178BQ8IXR5 827 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 LRRC71Q8N4P6 559 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 LINC01465Q8N7H1 131 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 KLHL23Q8NBE8 558 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 SPPL3Q8TCT6 385 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 WASF1Q92558 559 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 GJA10Q969M2 543 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 MBOAT7Q96N66 472 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 SCLT1Q96NL6 688 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 PHF20Q9BVI0 1012 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 NIFKQ9BYG3 293 aaKnown RBP13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 ADAMTS10Q9H324 1103 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 ELAC1Q9H777 363 aaKnown RBP13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 ATP6V0A4Q9HBG4 840 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 TMEM161AQ9NX61 479 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 TPCN1Q9ULQ1 816 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 KCNJ14Q9UNX9 436 aa13.97□□□□□ -0.17
CAPRIN1-213ENST00000533562 TBKBP1A7MCY6 615 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 HOXA2O43364 376 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 ITGB1P05556 798 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 TARBP2Q15633 366 aaKnown RBP13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 UGCGQ16739 394 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 CSPP1Q1MSJ5 1256 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 CTC1Q2NKJ3 1217 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 LETM2Q2VYF4 491 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 FAM102BQ5T8I3 360 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 PPP4R3AQ6IN85 833 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 B3GNT9Q6UX72 402 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 GJD3Q8N144 294 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 ETNPPLQ8TBG4 499 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 NLRP7Q8WX94 980 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 FAM20AQ96MK3 541 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 NAP1L4Q99733 375 aaKnown RBP13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 IGFLR1Q9H665 355 aa13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 SEPT9Q9UHD8 586 aaPredicted RBP13.96□□□□□ -0.17
CAPRIN1-213ENST00000533562 STK36Q9NRP7 1315 aa13.95□□□□□ -0.18
CAPRIN1-213ENST00000533562 C5orf42Q9H799 3197 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms