RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 GRIN2CQ14957 1233 aa11.03□□□□□ -0.64
NUP98-220ENST00000533346 RILPL1Q5EBL4 403 aa11.03□□□□□ -0.64
NUP98-220ENST00000533346 OTUD6AQ7L8S5 288 aa11.03□□□□□ -0.64
NUP98-220ENST00000533346 RTN4RL1Q86UN2 441 aaPredicted RBP11.03□□□□□ -0.64
NUP98-220ENST00000533346 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.03□□□□□ -0.64
NUP98-220ENST00000533346 BANK1Q8NDB2 785 aa11.03□□□□□ -0.64
NUP98-220ENST00000533346 ZBTB10Q96DT7 871 aa11.03□□□□□ -0.64
NUP98-220ENST00000533346 EIF2AK1Q9BQI3 630 aaKnown RBP11.03□□□□□ -0.64
NUP98-220ENST00000533346 POLR3CQ9BUI4 534 aaPredicted RBP11.03□□□□□ -0.64
NUP98-220ENST00000533346 FAM49AQ9H0Q0 323 aaPredicted RBP11.03□□□□□ -0.64
NUP98-220ENST00000533346 TSPYL2Q9H2G4 693 aaPredicted RBP11.03□□□□□ -0.64
NUP98-220ENST00000533346 NKX2-4Q9H2Z4 354 aa11.03□□□□□ -0.64
NUP98-220ENST00000533346 DHX33Q9H6R0 707 aaKnown RBP11.03□□□□□ -0.64
NUP98-220ENST00000533346 RC3H2Q9HBD1 1191 aaKnown RBP11.03□□□□□ -0.64
NUP98-220ENST00000533346 ERVK-5Q9HDB9 667 aa11.03□□□□□ -0.64
NUP98-220ENST00000533346 TUFT1Q9NNX1 390 aa11.03□□□□□ -0.64
NUP98-220ENST00000533346 CYP26B1Q9NR63 512 aa11.03□□□□□ -0.64
NUP98-220ENST00000533346 ANKEF1Q9NU02 776 aa11.03□□□□□ -0.64
NUP98-220ENST00000533346 RNF216Q9NWF9 866 aaPredicted RBP11.03□□□□□ -0.64
NUP98-220ENST00000533346 WRAP73Q9P2S5 460 aaPredicted RBP11.03□□□□□ -0.64
NUP98-220ENST00000533346 PADI3Q9ULW8 664 aa11.03□□□□□ -0.64
NUP98-220ENST00000533346 NOL7Q9UMY1 257 aaKnown RBP11.03□□□□□ -0.64
NUP98-220ENST00000533346 STK24Q9Y6E0 443 aa11.03□□□□□ -0.64
NUP98-220ENST00000533346 NLRC5Q86WI3 1866 aa11.03□□□□□ -0.64
NUP98-220ENST00000533346 ASAP2O43150 1006 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 TLL1O43897 1013 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 CA3P07451 260 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 OR52Z1P0C646 297 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 EIF4BP23588 611 aaKnown RBP11.02□□□□□ -0.65
NUP98-220ENST00000533346 YWHABP31946 246 aaKnown RBP11.02□□□□□ -0.65
NUP98-220ENST00000533346 RFC5P40937 340 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 PRPHP41219 470 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 TXKP42681 527 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 GPC3P51654 580 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 ERVK-21P61565 698 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 FAM189BP81408 668 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 TAP1Q03518 808 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 POU5F1BQ06416 359 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 TTC38Q5R3I4 469 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 PPP2R2DQ66LE6 453 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 ZNF410Q86VK4 478 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 KCTD17Q8N5Z5 321 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 TMEM40Q8WWA1 233 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 ZNF689Q96CS4 500 aaPredicted RBP11.02□□□□□ -0.65
NUP98-220ENST00000533346 FAM161BQ96MY7 647 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 SAMD11Q96NU1 681 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 MAP7D2Q96T17 732 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 LXNQ9BS40 222 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 TRAIPQ9BWF2 469 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.02□□□□□ -0.65
NUP98-220ENST00000533346 RGS18Q9NS28 235 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 LMCD1Q9NZU5 365 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 DAXXQ9UER7 740 aaPredicted RBP11.02□□□□□ -0.65
NUP98-220ENST00000533346 SEPT9Q9UHD8 586 aaPredicted RBP11.02□□□□□ -0.65
NUP98-220ENST00000533346 SMC3Q9UQE7 1217 aa11.02□□□□□ -0.65
NUP98-220ENST00000533346 FNDC1Q4ZHG4 1894 aaPredicted RBP11.02□□□□□ -0.65
NUP98-220ENST00000533346 DDX11L8A8MPP1 907 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 RPS6KA5O75582 802 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 SPATA31C1P0DKV0 1188 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 MYOGP15173 224 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 RPA1P27694 616 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 CD52P31358 61 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 MCM7P33993 719 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 DNM2P50570 870 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 NLRP11P59045 1033 aaKnown RBP11.01□□□□□ -0.65
NUP98-220ENST00000533346 PAK2Q13177 524 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 DSC3Q14574 896 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 PCBP1Q15365 356 aaKnown RBP eCLIP11.01□□□□□ -0.65
NUP98-220ENST00000533346 MTERF2Q49AM1 385 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 NCAPH2Q6IBW4 605 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 METTL13Q8N6R0 699 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 IGSF22Q8N9C0 903 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 LINC01599Q8WXQ3 324 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 DYDC2Q96IM9 177 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 INO80BQ9C086 356 aaPredicted RBP11.01□□□□□ -0.65
NUP98-220ENST00000533346 TMX1Q9H3N1 280 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 ELAC1Q9H777 363 aaKnown RBP11.01□□□□□ -0.65
NUP98-220ENST00000533346 C1orf112Q9NSG2 853 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 RGL1Q9NZL6 768 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 NOC2LQ9Y3T9 749 aaKnown RBP11.01□□□□□ -0.65
NUP98-220ENST00000533346 MUC3AQ02505 3323 aa11.01□□□□□ -0.65
NUP98-220ENST00000533346 LINC01553A4QN01 128 aa11□□□□□ -0.65
NUP98-220ENST00000533346 C9IYK1 514 aa11□□□□□ -0.65
NUP98-220ENST00000533346 DGKIO75912 1065 aa11□□□□□ -0.65
NUP98-220ENST00000533346 VTNP04004 478 aa11□□□□□ -0.65
NUP98-220ENST00000533346 PDIA4P13667 645 aaKnown RBP11□□□□□ -0.65
NUP98-220ENST00000533346 DARSP14868 501 aaKnown RBP11□□□□□ -0.65
NUP98-220ENST00000533346 PDCP20941 246 aa11□□□□□ -0.65
NUP98-220ENST00000533346 CLCN3P51790 818 aa11□□□□□ -0.65
NUP98-220ENST00000533346 FOSBP53539 338 aa11□□□□□ -0.65
NUP98-220ENST00000533346 TMEM62Q0P6H9 643 aa11□□□□□ -0.65
NUP98-220ENST00000533346 GNL2Q13823 731 aaKnown RBP11□□□□□ -0.65
NUP98-220ENST00000533346 ZNF174Q15697 407 aa11□□□□□ -0.65
NUP98-220ENST00000533346 LARP1BQ659C4 914 aaKnown RBP11□□□□□ -0.65
NUP98-220ENST00000533346 ARL6IP4Q66PJ3 421 aaKnown RBP11□□□□□ -0.65
NUP98-220ENST00000533346 FAM228AQ86W67 206 aa11□□□□□ -0.65
NUP98-220ENST00000533346 CATSPER3Q86XQ3 398 aa11□□□□□ -0.65
NUP98-220ENST00000533346 IFNLR1Q8IU57 520 aaPredicted RBP11□□□□□ -0.65
NUP98-220ENST00000533346 NPAS4Q8IUM7 802 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms