RNA–Protein interactions for RNA: ENST00000533302.5

TRIM29-220, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-220ENST00000533302 UTP4Q969X6 686 aaKnown RBP6.29□□□□□ -1.4
TRIM29-220ENST00000533302 CDX2Q99626 313 aaPredicted RBP6.29□□□□□ -1.4
TRIM29-220ENST00000533302 MIPEPQ99797 713 aa6.29□□□□□ -1.4
TRIM29-220ENST00000533302 LBHD1Q9BQE6 289 aaPredicted RBP6.29□□□□□ -1.4
TRIM29-220ENST00000533302 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.29□□□□□ -1.4
TRIM29-220ENST00000533302 SUSD2Q9UGT4 822 aa6.29□□□□□ -1.4
TRIM29-220ENST00000533302 PFASO15067 1338 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 SALL1Q9NSC2 1324 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 ESYT3A0FGR9 886 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 EYA2O00167 538 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 HSD3B2P26439 372 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 MAP4P27816 1152 aaKnown RBP6.28□□□□□ -1.4
TRIM29-220ENST00000533302 CHMP4BP1P59074 171 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 SSRP1Q08945 709 aaKnown RBP6.28□□□□□ -1.4
TRIM29-220ENST00000533302 CDK5R2Q13319 367 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 LRRC26Q2I0M4 334 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 BBS9Q3SYG4 887 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 C2orf27AQ580R0 203 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 AXDND1Q5T1B0 1012 aaPredicted RBP6.28□□□□□ -1.4
TRIM29-220ENST00000533302 LETMD1Q6P1Q0 360 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 CDH24Q86UP0 819 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 FAM20CQ8IXL6 584 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 ZGPATQ8N5A5 531 aaKnown RBP6.28□□□□□ -1.4
TRIM29-220ENST00000533302 SOCS4Q8WXH5 440 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 TRIB2Q92519 343 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 ZNF669Q96BR6 464 aaPredicted RBP6.28□□□□□ -1.4
TRIM29-220ENST00000533302 VWCEQ96DN2 955 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 YIPF2Q9BWQ6 316 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 ASCC2Q9H1I8 757 aaPredicted RBP6.28□□□□□ -1.4
TRIM29-220ENST00000533302 SEMA6BQ9H3T3 888 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 C1GALT1Q9NS00 363 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.28□□□□□ -1.4
TRIM29-220ENST00000533302 MORF4L1Q9UBU8 362 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 DENND2AQ9ULE3 1009 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.28□□□□□ -1.4
TRIM29-220ENST00000533302 CEP131Q9UPN4 1083 aa6.28□□□□□ -1.4
TRIM29-220ENST00000533302 GAKO14976 1311 aa6.27□□□□□ -1.41
TRIM29-220ENST00000533302 CBFA2T2O43439 604 aa6.27□□□□□ -1.41
TRIM29-220ENST00000533302 EPHX1P07099 455 aa6.27□□□□□ -1.41
TRIM29-220ENST00000533302 HOXA7P31268 230 aaPredicted RBP6.27□□□□□ -1.41
TRIM29-220ENST00000533302 CHRNA4P43681 627 aa6.27□□□□□ -1.41
TRIM29-220ENST00000533302 HMGCS2P54868 508 aa6.27□□□□□ -1.41
TRIM29-220ENST00000533302 CACNB2Q08289 660 aaPredicted RBP6.27□□□□□ -1.41
TRIM29-220ENST00000533302 PICALMQ13492 652 aa6.27□□□□□ -1.41
TRIM29-220ENST00000533302 MAP7Q14244 749 aa6.27□□□□□ -1.41
TRIM29-220ENST00000533302 ALYREFQ86V81 257 aaKnown RBP6.27□□□□□ -1.41
TRIM29-220ENST00000533302 GPRC5AQ8NFJ5 357 aa6.27□□□□□ -1.41
TRIM29-220ENST00000533302 THAP3Q8WTV1 239 aaPredicted RBP6.27□□□□□ -1.41
TRIM29-220ENST00000533302 USP6NLQ92738 828 aa6.27□□□□□ -1.41
TRIM29-220ENST00000533302 KREMEN1Q96MU8 473 aa6.27□□□□□ -1.41
TRIM29-220ENST00000533302 P2RX7Q99572 595 aaKnown RBP6.27□□□□□ -1.41
TRIM29-220ENST00000533302 HAUS7Q99871 368 aa6.27□□□□□ -1.41
TRIM29-220ENST00000533302 OSBPL5Q9H0X9 879 aaPredicted RBP6.27□□□□□ -1.41
TRIM29-220ENST00000533302 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.27□□□□□ -1.41
TRIM29-220ENST00000533302 FANCLQ9NW38 375 aa6.27□□□□□ -1.41
TRIM29-220ENST00000533302 TMEM260Q9NX78 707 aa6.27□□□□□ -1.41
TRIM29-220ENST00000533302 EYSQ5T1H1 3165 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 RBBP6Q7Z6E9 1792 aaKnown RBP6.26□□□□□ -1.41
TRIM29-220ENST00000533302 GPR75-ASB3A0A0A6YYF3 556 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 FAM95CA0A1B0GW59 222 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 ANKRD62A6NC57 917 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 SHOXO15266 292 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 MAP4K4O95819 1239 aaPredicted RBP6.26□□□□□ -1.41
TRIM29-220ENST00000533302 ZKSCAN1P17029 563 aaPredicted RBP6.26□□□□□ -1.41
TRIM29-220ENST00000533302 CCND3P30281 292 aaPredicted RBP6.26□□□□□ -1.41
TRIM29-220ENST00000533302 MAPK4P31152 587 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 RGS2P41220 211 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 BTDP43251 543 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 RFX5P48382 616 aaPredicted RBP6.26□□□□□ -1.41
TRIM29-220ENST00000533302 BACE1P56817 501 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 ATP2B3Q16720 1220 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 SPTY2D1Q68D10 685 aaPredicted RBP6.26□□□□□ -1.41
TRIM29-220ENST00000533302 ATG9AQ7Z3C6 839 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 DZIP1Q86YF9 867 aaKnown RBP6.26□□□□□ -1.41
TRIM29-220ENST00000533302 CCAR1Q8IX12 1150 aaKnown RBP6.26□□□□□ -1.41
TRIM29-220ENST00000533302 CCDC144CPQ8IYA2 1237 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 TOP6BLQ8N6T0 577 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 MAFAQ8NHW3 353 aaPredicted RBP6.26□□□□□ -1.41
TRIM29-220ENST00000533302 SSBP4Q9BWG4 385 aaPredicted RBP6.26□□□□□ -1.41
TRIM29-220ENST00000533302 SPATA9Q9BWV2 254 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 SENP6Q9GZR1 1112 aaPredicted RBP6.26□□□□□ -1.41
TRIM29-220ENST00000533302 MKRN2Q9H000 416 aaKnown RBP6.26□□□□□ -1.41
TRIM29-220ENST00000533302 USP44Q9H0E7 712 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 KLHL25Q9H0H3 589 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 EPN3Q9H201 632 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 AS3MTQ9HBK9 375 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 DDX4Q9NQI0 724 aaKnown RBP6.26□□□□□ -1.41
TRIM29-220ENST00000533302 RBPJLQ9UBG7 517 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 DLG5Q8TDM6 1919 aa6.26□□□□□ -1.41
TRIM29-220ENST00000533302 ANKRD34BA5PLL1 514 aa6.25□□□□□ -1.41
TRIM29-220ENST00000533302 CDC45O75419 566 aa6.25□□□□□ -1.41
TRIM29-220ENST00000533302 LEFTY1O75610 366 aa6.25□□□□□ -1.41
TRIM29-220ENST00000533302 CIAO1O76071 339 aa6.25□□□□□ -1.41
TRIM29-220ENST00000533302 EOMESO95936 686 aa6.25□□□□□ -1.41
TRIM29-220ENST00000533302 FAM153BP0C7A2 387 aa6.25□□□□□ -1.41
TRIM29-220ENST00000533302 PHKA1P46020 1223 aa6.25□□□□□ -1.41
TRIM29-220ENST00000533302 ZNF143P52747 638 aaPredicted RBP6.25□□□□□ -1.41
TRIM29-220ENST00000533302 RHBDL3P58872 404 aa6.25□□□□□ -1.41
TRIM29-220ENST00000533302 HERVK_113P62684 666 aa6.25□□□□□ -1.41
TRIM29-220ENST00000533302 IRX3P78415 501 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms