RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 PLA2G4BP0C869 781 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 CKBP12277 381 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 PLCG1P19174 1290 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 CDC42EP1Q00587 391 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 IER5Q5VY09 327 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 RESP18Q5W5W9 173 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 PADI6Q6TGC4 694 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 KIAA0319LQ8IZA0 1049 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 ZNF710Q8N1W2 664 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 LRRC71Q8N4P6 559 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 SYT2Q8N9I0 419 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 TCP11Q8WWU5 503 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 TRIM43Q96BQ3 446 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 MAP7D2Q96T17 732 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 NOC4LQ9BVI4 516 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 PPP1R12CQ9BZL4 782 aa12.51□□□□□ -0.41
TRAPPC4-211ENST00000533012 A0A1W2PQ27 194 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 A0A1W2PQ64 194 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 A0A1W2PQD8 194 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 M0QZ92 97 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 GAS2O43903 313 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 SELPP16109 830 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 CYP11B2P19099 503 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 STAT6P42226 847 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 EMC2Q15006 297 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 TRIM71Q2Q1W2 868 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 TPRNQ4KMQ1 711 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 ZNF618Q5T7W0 954 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 KCNK18Q7Z418 384 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 PDILTQ8N807 584 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 IQUBQ8NA54 791 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 DHX38Q92620 1227 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 RAD54LQ92698 747 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 WNT8BQ93098 351 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 MTRQ99707 1265 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 LBHD1Q9BQE6 289 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 PYM1Q9BRP8 204 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 ATP6V0A4Q9HBG4 840 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 SUCLA2Q9P2R7 463 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 STK17AQ9UEE5 414 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 ZMYND8Q9ULU4 1186 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 AKT3Q9Y243 479 aa12.5□□□□□ -0.41
TRAPPC4-211ENST00000533012 RSPH10B2B2RC85 870 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 POLR2DO15514 142 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 ASAP2O43150 1006 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 USO1O60763 962 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 PARNO95453 639 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 IQCF3P0C7M6 154 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 RSPH10BP0C881 870 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 SYN1P17600 705 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 CYP2C18P33260 490 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 CLCN3P51790 818 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 SLC12A3P55017 1021 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 CCL23P55773 120 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 RBL2Q08999 1139 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 DHX8Q14562 1220 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 FAM26DQ5JW98 314 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 MFSD5Q6N075 450 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 SV2BQ7L1I2 683 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 LRRC8DQ7L1W4 858 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 MAEAQ7L5Y9 396 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 TMEM199Q8N511 208 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 LINC01465Q8N7H1 131 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 MCPH1Q8NEM0 835 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 LARP4BQ92615 738 aaKnown RBP12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 TMEM143Q96AN5 459 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 BMP2KQ9NSY1 1161 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 BLOC1S4Q9NUP1 217 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 KCND2Q9NZV8 630 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 KCNH3Q9ULD8 1083 aa12.49□□□□□ -0.41
TRAPPC4-211ENST00000533012 UMODL1Q5DID0 1318 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 A0A087X0B3 334 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 A0A1B0GVL5 298 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 VTNP04004 478 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 CTSHP09668 335 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 ITGB8P26012 769 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 MRPS6P82932 125 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 TMEM62Q0P6H9 643 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 MCM6Q14566 821 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 MXD4Q14582 209 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 FAM102BQ5T8I3 360 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 RINT1Q6NUQ1 792 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 CLEC17AQ6ZS10 378 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 C1orf186Q6ZWK4 172 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 FSIP1Q8NA03 581 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 PRPF31Q8WWY3 499 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 PSPC1Q8WXF1 523 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 MRPS27Q92552 414 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 BADQ92934 168 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 DHX58Q96C10 678 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 GBP4Q96PP9 640 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 TIPINQ9BVW5 301 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 CELF4Q9BZC1 486 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 CUEDC2Q9H467 287 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 XPNPEP1Q9NQW7 623 aa12.48□□□□□ -0.41
TRAPPC4-211ENST00000533012 FAM237AA0A1B0GTK4 181 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 CHRNA1P02708 482 aa12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 KRT18P05783 430 aaKnown RBP12.47□□□□□ -0.41
TRAPPC4-211ENST00000533012 PFKFB1P16118 471 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms