RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 NBPF15Q8N660 670 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 PPP2R3BQ9Y5P8 575 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 FRMPD1Q5SYB0 1578 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 ZNF189O75820 626 aaPredicted RBP11.54□□□□□ -0.56
COLCA1-203ENST00000532918 CPT1AP50416 773 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 FOXO4P98177 505 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 SATB1Q01826 763 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 USP17L6PQ6QN14 398 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 ATP6V1E2Q96A05 226 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 HDAC11Q96DB2 347 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 DYDC2Q96IM9 177 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 CALR3Q96L12 384 aaKnown RBP11.54□□□□□ -0.56
COLCA1-203ENST00000532918 AAASQ9NRG9 546 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 STAP1Q9ULZ2 295 aa11.54□□□□□ -0.56
COLCA1-203ENST00000532918 DYNC1LI2O43237 492 aaPredicted RBP11.53□□□□□ -0.56
COLCA1-203ENST00000532918 AKR1B1P15121 316 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 PDE1BQ01064 536 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 EPHA7Q15375 998 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 C12orf60Q5U649 245 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 LINC00301Q8NCQ3 95 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 DDX41Q9UJV9 622 aaKnown RBP11.53□□□□□ -0.56
COLCA1-203ENST00000532918 GDAQ9Y2T3 454 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 EPN1Q9Y6I3 576 aaPredicted RBP11.53□□□□□ -0.56
COLCA1-203ENST00000532918 SETBP1Q9Y6X0 1596 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 GOLGA8IPA6NC78 632 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 SPDYE2BA6NHP3 402 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 GOLGA8JA6NMD2 632 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 SPDYE6P0CI01 402 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 VEGFAP15692 232 aaPredicted RBP11.53□□□□□ -0.56
COLCA1-203ENST00000532918 KRT71Q3SY84 523 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 DARS2Q6PI48 645 aaKnown RBP11.53□□□□□ -0.56
COLCA1-203ENST00000532918 TMEM35BQ8NCS4 154 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 DHX38Q92620 1227 aaKnown RBP11.53□□□□□ -0.56
COLCA1-203ENST00000532918 RILPQ96NA2 401 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 ZC4H2Q9NQZ6 224 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 BARHL2Q9NY43 387 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 DCCP43146 1447 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 NEMP1O14524 444 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 IKBKBO14920 756 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 BNIP3LO60238 219 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 RNF40O75150 1001 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 LRRN2O75325 713 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 CPP00450 1065 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 KIAA1755Q5JYT7 1200 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 CCDC170Q8IYT3 715 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 ENAHQ8N8S7 591 aaPredicted RBP11.53□□□□□ -0.56
COLCA1-203ENST00000532918 SLC44A5Q8NCS7 719 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 MCUR1Q96AQ8 359 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 NSUN4Q96CB9 384 aaKnown RBP11.53□□□□□ -0.56
COLCA1-203ENST00000532918 TRPV6Q9H1D0 765 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
COLCA1-203ENST00000532918 JRKLQ9Y4A0 524 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 CCDC13Q8IYE1 715 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 PIGOQ8TEQ8 1089 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 CARD6Q9BX69 1037 aa11.53□□□□□ -0.56
COLCA1-203ENST00000532918 NEDD4P46934 1319 aa11.52□□□□□ -0.56
COLCA1-203ENST00000532918 RWDD4Q6NW29 188 aaKnown RBP11.52□□□□□ -0.56
COLCA1-203ENST00000532918 XRRA1Q6P2D8 792 aa11.52□□□□□ -0.56
COLCA1-203ENST00000532918 EFHBQ8N7U6 833 aa11.52□□□□□ -0.56
COLCA1-203ENST00000532918 DEFB129Q9H1M3 183 aa11.52□□□□□ -0.56
COLCA1-203ENST00000532918 ARHGEF40Q8TER5 1519 aa11.52□□□□□ -0.56
COLCA1-203ENST00000532918 SART1O43290 800 aaKnown RBP11.52□□□□□ -0.57
COLCA1-203ENST00000532918 CYBBP04839 570 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 STX2P32856 288 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 NECTIN1Q15223 517 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 VSIG1Q86XK7 387 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 TBC1D10CQ8IV04 446 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 MRFAP1L1Q96HT8 127 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 GLT1D1Q96MS3 346 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 CALN1Q9BXU9 219 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 DIP2CQ9Y2E4 1556 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 APOEP02649 317 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 RPLP2P05387 115 aaKnown RBP11.52□□□□□ -0.57
COLCA1-203ENST00000532918 INHBAP08476 426 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 SAT1P21673 171 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 EPHX2P34913 555 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 GCLCP48506 637 aaPredicted RBP11.52□□□□□ -0.57
COLCA1-203ENST00000532918 VPS41P49754 854 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 MXD4Q14582 209 aaPredicted RBP11.52□□□□□ -0.57
COLCA1-203ENST00000532918 SBK1Q52WX2 424 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 TMCO4Q5TGY1 634 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 RAPH1Q70E73 1250 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 SH3TC2Q8TF17 1288 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 AFG1LQ8WV93 481 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 SEPT1Q8WYJ6 367 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 SEPT8Q92599 483 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 VCPKMTQ9H867 229 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 ASAP2O43150 1006 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 ZNF131P52739 623 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 MAP3K21Q5TCX8 1036 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 CDC42EP5Q6NZY7 148 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 PROM2Q8N271 834 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 RAD54LQ92698 747 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 NUDCD1Q96RS6 583 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 DYRK4Q9NR20 520 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 ASNSD1Q9NWL6 643 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 BAG5Q9UL15 447 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 PCDHB6Q9Y5E3 794 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 CDC42BPBQ9Y5S2 1711 aa11.52□□□□□ -0.57
COLCA1-203ENST00000532918 PVALEFA0A1B0GWK0 134 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms