RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 TMEM62Q0P6H9 643 aa27.7■■■□□ 2.02
USP48-214ENST00000532737 MKRN4PQ13434 485 aaPredicted RBP27.7■■■□□ 2.02
USP48-214ENST00000532737 ATL3Q6DD88 541 aa27.7■■■□□ 2.02
USP48-214ENST00000532737 NME8Q8N427 588 aa27.7■■■□□ 2.02
USP48-214ENST00000532737 CLIC6Q96NY7 704 aa27.7■■■□□ 2.02
USP48-214ENST00000532737 OSBPL7Q9BZF2 842 aa27.7■■■□□ 2.02
USP48-214ENST00000532737 CSRNP2Q9H175 543 aa27.7■■■□□ 2.02
USP48-214ENST00000532737 PPME1Q9Y570 386 aa27.7■■■□□ 2.02
USP48-214ENST00000532737 SPTLC2O15270 562 aa27.69■■■□□ 2.02
USP48-214ENST00000532737 NBNO60934 754 aa27.69■■■□□ 2.02
USP48-214ENST00000532737 YEATS4O95619 227 aa27.69■■■□□ 2.02
USP48-214ENST00000532737 RFC2P35250 354 aa27.69■■■□□ 2.02
USP48-214ENST00000532737 RARRES1P49788 294 aa27.69■■■□□ 2.02
USP48-214ENST00000532737 NUCB2P80303 420 aa27.69■■■□□ 2.02
USP48-214ENST00000532737 DRP2Q13474 957 aa27.69■■■□□ 2.02
USP48-214ENST00000532737 Q7L0L9 218 aa27.69■■■□□ 2.02
USP48-214ENST00000532737 DEFB128Q7Z7B8 93 aa27.69■■■□□ 2.02
USP48-214ENST00000532737 DEFB123Q8N688 67 aa27.69■■■□□ 2.02
USP48-214ENST00000532737 PNMA5Q96PV4 448 aa27.69■■■□□ 2.02
USP48-214ENST00000532737 DHX33Q9H6R0 707 aaKnown RBP27.69■■■□□ 2.02
USP48-214ENST00000532737 DDX19AQ9NUU7 478 aaKnown RBP27.69■■■□□ 2.02
USP48-214ENST00000532737 DBR1Q9UK59 544 aaKnown RBP27.69■■■□□ 2.02
USP48-214ENST00000532737 RBM19Q9Y4C8 960 aaKnown RBP27.69■■■□□ 2.02
USP48-214ENST00000532737 CDY2AQ9Y6F7 541 aa27.69■■■□□ 2.02
USP48-214ENST00000532737 RPLP2P05387 115 aaKnown RBP27.68■■■□□ 2.02
USP48-214ENST00000532737 RFC5P40937 340 aa27.68■■■□□ 2.02
USP48-214ENST00000532737 GRB10Q13322 594 aa27.68■■■□□ 2.02
USP48-214ENST00000532737 ZRSR1Q15695 479 aaKnown RBP27.68■■■□□ 2.02
USP48-214ENST00000532737 USP49Q70CQ1 688 aa27.68■■■□□ 2.02
USP48-214ENST00000532737 CABP7Q86V35 215 aa27.68■■■□□ 2.02
USP48-214ENST00000532737 RPUSD2Q8IZ73 545 aaKnown RBP27.68■■■□□ 2.02
USP48-214ENST00000532737 KRI1Q8N9T8 703 aaKnown RBP27.68■■■□□ 2.02
USP48-214ENST00000532737 BMP2KQ9NSY1 1161 aaPredicted RBP27.68■■■□□ 2.02
USP48-214ENST00000532737 PARNO95453 639 aaKnown RBP27.67■■■□□ 2.02
USP48-214ENST00000532737 VTNP04004 478 aa27.67■■■□□ 2.02
USP48-214ENST00000532737 TMOD1P28289 359 aa27.67■■■□□ 2.02
USP48-214ENST00000532737 UBA7P41226 1012 aa27.67■■■□□ 2.02
USP48-214ENST00000532737 POLGP54098 1239 aaPredicted RBP27.67■■■□□ 2.02
USP48-214ENST00000532737 SPECC1Q5M775 1068 aa27.67■■■□□ 2.02
USP48-214ENST00000532737 HYIQ5T013 277 aa27.67■■■□□ 2.02
USP48-214ENST00000532737 IER5Q5VY09 327 aa27.67■■■□□ 2.02
USP48-214ENST00000532737 KCNK18Q7Z418 384 aa27.67■■■□□ 2.02
USP48-214ENST00000532737 PLIN2Q99541 437 aa27.67■■■□□ 2.02
USP48-214ENST00000532737 CFAP45Q9UL16 551 aa27.67■■■□□ 2.02
USP48-214ENST00000532737 TRPV2Q9Y5S1 764 aa27.67■■■□□ 2.02
USP48-214ENST00000532737 PPP6R2O75170 966 aa27.66■■■□□ 2.02
USP48-214ENST00000532737 CXCL10P02778 98 aa27.66■■■□□ 2.02
USP48-214ENST00000532737 TMEM240Q5SV17 173 aa27.66■■■□□ 2.02
USP48-214ENST00000532737 C9orf50Q5SZB4 431 aa27.66■■■□□ 2.02
USP48-214ENST00000532737 ZNF365Q70YC5 407 aa27.66■■■□□ 2.02
USP48-214ENST00000532737 SLC17A8Q8NDX2 589 aa27.66■■■□□ 2.02
USP48-214ENST00000532737 SLC7A3Q8WY07 619 aa27.66■■■□□ 2.02
USP48-214ENST00000532737 EPSTI1Q96J88 318 aa27.66■■■□□ 2.02
USP48-214ENST00000532737 CCDC43Q96MW1 224 aaKnown RBP27.66■■■□□ 2.02
USP48-214ENST00000532737 MAP7D2Q96T17 732 aa27.66■■■□□ 2.02
USP48-214ENST00000532737 JPH2Q9BR39 696 aaPredicted RBP27.66■■■□□ 2.02
USP48-214ENST00000532737 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.66■■■□□ 2.023e-13■■□□□ 12.8
USP48-214ENST00000532737 CELF4Q9BZC1 486 aaKnown RBP27.66■■■□□ 2.02
USP48-214ENST00000532737 CDHR5Q9HBB8 845 aa27.66■■■□□ 2.02
USP48-214ENST00000532737 AKT3Q9Y243 479 aa27.66■■■□□ 2.02
USP48-214ENST00000532737 MYH15Q9Y2K3 1946 aa27.66■■■□□ 2.02
USP48-214ENST00000532737 A0A0C4DFX4 3053 aa27.66■■■□□ 2.02
USP48-214ENST00000532737 E9PMD0 336 aa27.65■■■□□ 2.02
USP48-214ENST00000532737 EMC2Q15006 297 aa27.65■■■□□ 2.02
USP48-214ENST00000532737 SHHQ15465 462 aa27.65■■■□□ 2.02
USP48-214ENST00000532737 EXOC8Q8IYI6 725 aa27.65■■■□□ 2.02
USP48-214ENST00000532737 PPP1R16BQ96T49 567 aa27.65■■■□□ 2.02
USP48-214ENST00000532737 XPNPEP1Q9NQW7 623 aa27.65■■■□□ 2.02
USP48-214ENST00000532737 MTMR10Q9NXD2 777 aa27.65■■■□□ 2.02
USP48-214ENST00000532737 SUCLA2Q9P2R7 463 aaPredicted RBP27.65■■■□□ 2.02
USP48-214ENST00000532737 RCOR1Q9UKL0 485 aa27.65■■■□□ 2.02
USP48-214ENST00000532737 ATP6V1DQ9Y5K8 247 aa27.65■■■□□ 2.02
USP48-214ENST00000532737 KDM3AQ9Y4C1 1321 aa27.65■■■□□ 2.02
USP48-214ENST00000532737 TANC1Q9C0D5 1861 aa27.64■■■□□ 2.02
USP48-214ENST00000532737 SCN5AQ14524 2016 aa27.64■■■□□ 2.02
USP48-214ENST00000532737 EVPLQ92817 2033 aa27.64■■■□□ 2.02
USP48-214ENST00000532737 SLC26A4O43511 780 aa27.64■■■□□ 2.02
USP48-214ENST00000532737 TMEM119Q4V9L6 283 aa27.64■■■□□ 2.02
USP48-214ENST00000532737 TMEM143Q96AN5 459 aa27.64■■■□□ 2.02
USP48-214ENST00000532737 CCSER1Q9C0I3 900 aa27.64■■■□□ 2.02
USP48-214ENST00000532737 BHMT2Q9H2M3 363 aa27.64■■■□□ 2.02
USP48-214ENST00000532737 DNM3Q9UQ16 869 aa27.64■■■□□ 2.02
USP48-214ENST00000532737 ARHGEF35A5YM69 484 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 M0QZ92 97 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 USO1O60763 962 aaKnown RBP27.63■■■□□ 2.01
USP48-214ENST00000532737 GPR32O75388 356 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 DGAT1O75907 488 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 EYA4O95677 639 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 FGBP02675 491 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 PFKMP08237 780 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 DNM2P50570 870 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 LPIN1Q14693 890 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 KIZQ2M2Z5 673 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 TCTN1Q2MV58 587 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 FBXO47Q5MNV8 452 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 KCNG4Q8TDN1 519 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 SYMPKQ92797 1274 aaKnown RBP27.63■■■□□ 2.01
USP48-214ENST00000532737 CDK5RAP3Q96JB5 506 aa27.63■■■□□ 2.01
USP48-214ENST00000532737 ZNF668Q96K58 619 aaPredicted RBP27.63■■■□□ 2.01
USP48-214ENST00000532737 ADAMTS10Q9H324 1103 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms