RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 NLRP11P59045 1033 aaKnown RBP16.2■□□□□ 0.18
FOXR1-202ENST00000531539 NFX1Q12986 1120 aaKnown RBP16.2■□□□□ 0.18
FOXR1-202ENST00000531539 PTGDRQ13258 359 aa16.2■□□□□ 0.18
FOXR1-202ENST00000531539 ORC2Q13416 577 aaPredicted RBP16.2■□□□□ 0.18
FOXR1-202ENST00000531539 GRIN2CQ14957 1233 aa16.2■□□□□ 0.18
FOXR1-202ENST00000531539 XKR9Q5GH70 373 aa16.2■□□□□ 0.18
FOXR1-202ENST00000531539 USP38Q8NB14 1042 aa16.2■□□□□ 0.18
FOXR1-202ENST00000531539 GUCD1Q96NT3 240 aa16.2■□□□□ 0.18
FOXR1-202ENST00000531539 CEP89Q96ST8 783 aa16.2■□□□□ 0.18
FOXR1-202ENST00000531539 CDX2Q99626 313 aaPredicted RBP16.2■□□□□ 0.18
FOXR1-202ENST00000531539 CYP26B1Q9NR63 512 aa16.2■□□□□ 0.18
FOXR1-202ENST00000531539 NOC2LQ9Y3T9 749 aaKnown RBP16.2■□□□□ 0.18
FOXR1-202ENST00000531539 TANC1Q9C0D5 1861 aa16.2■□□□□ 0.18
FOXR1-202ENST00000531539 KDM3AQ9Y4C1 1321 aa16.19■□□□□ 0.18
FOXR1-202ENST00000531539 EVPLQ92817 2033 aa16.19■□□□□ 0.18
FOXR1-202ENST00000531539 TMEM265A0A087WTH1 108 aa16.19■□□□□ 0.18
FOXR1-202ENST00000531539 POTEMA6NI47 508 aa16.19■□□□□ 0.18
FOXR1-202ENST00000531539 K7ELQ4 463 aaPredicted RBP16.19■□□□□ 0.18
FOXR1-202ENST00000531539 GPR32O75388 356 aa16.19■□□□□ 0.18
FOXR1-202ENST00000531539 MAFO75444 373 aaPredicted RBP16.19■□□□□ 0.18
FOXR1-202ENST00000531539 RPS6KA5O75582 802 aa16.19■□□□□ 0.18
FOXR1-202ENST00000531539 CA3P07451 260 aa16.19■□□□□ 0.18
FOXR1-202ENST00000531539 YWHABP31946 246 aaKnown RBP16.19■□□□□ 0.18
FOXR1-202ENST00000531539 PAK2Q13177 524 aa16.19■□□□□ 0.18
FOXR1-202ENST00000531539 MKRN4PQ13434 485 aaPredicted RBP16.19■□□□□ 0.18
FOXR1-202ENST00000531539 RTN4RL1Q86UN2 441 aaPredicted RBP16.19■□□□□ 0.18
FOXR1-202ENST00000531539 LINC01465Q8N7H1 131 aa16.19■□□□□ 0.18
FOXR1-202ENST00000531539 RAD9AQ99638 391 aa16.19■□□□□ 0.18
FOXR1-202ENST00000531539 OSMRQ99650 979 aa16.19■□□□□ 0.18
FOXR1-202ENST00000531539 SUCLA2Q9P2R7 463 aaPredicted RBP16.19■□□□□ 0.18
FOXR1-202ENST00000531539 VPS37CA5D8V6 355 aaPredicted RBP16.18■□□□□ 0.18
FOXR1-202ENST00000531539 GJB5O95377 273 aa16.18■□□□□ 0.18
FOXR1-202ENST00000531539 DRP2Q13474 957 aa16.18■□□□□ 0.18
FOXR1-202ENST00000531539 RILPL1Q5EBL4 403 aa16.18■□□□□ 0.18
FOXR1-202ENST00000531539 PPP2R2DQ66LE6 453 aa16.18■□□□□ 0.18
FOXR1-202ENST00000531539 TMEM40Q8WWA1 233 aa16.18■□□□□ 0.18
FOXR1-202ENST00000531539 MYLIPQ8WY64 445 aa16.18■□□□□ 0.18
FOXR1-202ENST00000531539 TOP1MTQ969P6 601 aa16.18■□□□□ 0.18
FOXR1-202ENST00000531539 SCLT1Q96NL6 688 aa16.18■□□□□ 0.18
FOXR1-202ENST00000531539 JPH2Q9BR39 696 aaPredicted RBP16.18■□□□□ 0.18
FOXR1-202ENST00000531539 ADAMTS10Q9H324 1103 aa16.18■□□□□ 0.18
FOXR1-202ENST00000531539 PRDM12Q9H4Q4 367 aa16.18■□□□□ 0.18
FOXR1-202ENST00000531539 CERS4Q9HA82 394 aa16.18■□□□□ 0.18
FOXR1-202ENST00000531539 ST3GAL5Q9UNP4 418 aa16.18■□□□□ 0.18
FOXR1-202ENST00000531539 IGKV6-21A0A0C4DH24 114 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 GPR182O15218 404 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 PDCP20941 246 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 IBSPP21815 317 aaPredicted RBP16.17■□□□□ 0.18
FOXR1-202ENST00000531539 POLGP54098 1239 aaPredicted RBP16.17■□□□□ 0.18
FOXR1-202ENST00000531539 ODR4Q5SWX8 454 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 CATSPER3Q86XQ3 398 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 EXOC8Q8IYI6 725 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 ERMNQ8TAM6 284 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 NEK9Q8TD19 979 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 PIGOQ8TEQ8 1089 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 NLRP7Q8WX94 980 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 SLC7A3Q8WY07 619 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 SNX21Q969T3 373 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 INTS4Q96HW7 963 aaKnown RBP16.17■□□□□ 0.18
FOXR1-202ENST00000531539 FTHL17Q9BXU8 183 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 ERVK-5Q9HDB9 667 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.17■□□□□ 0.18
FOXR1-202ENST00000531539 BMP2KQ9NSY1 1161 aaPredicted RBP16.17■□□□□ 0.18
FOXR1-202ENST00000531539 LRWD1Q9UFC0 647 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 INSL6Q9Y581 213 aa16.17■□□□□ 0.18
FOXR1-202ENST00000531539 LAMA3Q16787 3333 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 WDR81Q562E7 1941 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 LCHNA4D1U4 455 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 MED24O75448 989 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 LYPLA2O95372 231 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 SPATA31C1P0DKV0 1188 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 RFC5P40937 340 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 GPC3P51654 580 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 CDC42EP1Q00587 391 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 PDIA5Q14554 519 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 FERMT3Q86UX7 667 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 RHPN2Q8IUC4 686 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 ZNF710Q8N1W2 664 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 TMEM143Q96AN5 459 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 POLR3CQ9BUI4 534 aaPredicted RBP16.16■□□□□ 0.18
FOXR1-202ENST00000531539 TMX1Q9H3N1 280 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 TUFT1Q9NNX1 390 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 ANKEF1Q9NU02 776 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 PPME1Q9Y570 386 aa16.16■□□□□ 0.18
FOXR1-202ENST00000531539 A0A087WZ62 844 aa16.15■□□□□ 0.18
FOXR1-202ENST00000531539 CSDE1O75534 798 aaKnown RBP16.15■□□□□ 0.18
FOXR1-202ENST00000531539 ARHGEF15O94989 841 aa16.15■□□□□ 0.18
FOXR1-202ENST00000531539 XRCC6P12956 609 aaKnown RBP eCLIP16.15■□□□□ 0.18
FOXR1-202ENST00000531539 SYT1P21579 422 aa16.15■□□□□ 0.18
FOXR1-202ENST00000531539 EIF4BP23588 611 aaKnown RBP16.15■□□□□ 0.18
FOXR1-202ENST00000531539 FXR2P51116 673 aaKnown RBP eCLIP16.15■□□□□ 0.18
FOXR1-202ENST00000531539 TAP1Q03518 808 aa16.15■□□□□ 0.18
FOXR1-202ENST00000531539 DTHD1Q6ZMT9 781 aa16.15■□□□□ 0.18
FOXR1-202ENST00000531539 FAM228AQ86W67 206 aa16.15■□□□□ 0.18
FOXR1-202ENST00000531539 KSR1Q8IVT5 923 aa16.15■□□□□ 0.18
FOXR1-202ENST00000531539 HSCBQ8IWL3 235 aa16.15■□□□□ 0.18
FOXR1-202ENST00000531539 PRPF31Q8WWY3 499 aaKnown RBP16.15■□□□□ 0.18
FOXR1-202ENST00000531539 CCDC43Q96MW1 224 aaKnown RBP16.15■□□□□ 0.18
FOXR1-202ENST00000531539 NACC1Q96RE7 527 aa16.15■□□□□ 0.18
FOXR1-202ENST00000531539 ADAM2Q99965 735 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms