RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-209	ENST00000531474	RPN1	P04843	607 aa	Known RBP	10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	BMP6	P22004	513 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	CYP4A11	Q02928	519 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	ITGA7	Q13683	1181 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	EPHA7	Q15375	998 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	UGCG	Q16739	394 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	KIAA0753	Q2KHM9	967 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	NBPF20	Q3BBV1	942 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	SV2B	Q7L1I2	683 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	UBE2Q1	Q7Z7E8	422 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	C7orf31	Q8N865	590 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	CCDC112	Q8NEF3	446 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	ERMN	Q8TAM6	284 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	ATP6V0A1	Q93050	837 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	DYDC2	Q96IM9	177 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	CDK5RAP3	Q96JB5	506 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	C7orf25	Q9BPX7	421 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	EIF2AK1	Q9BQI3	630 aa	Known RBP	10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	XPO4	Q9C0E2	1151 aa	Known RBP	10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	NT5C3A	Q9H0P0	336 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	FANCL	Q9NW38	375 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	RGL1	Q9NZL6	768 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	RWDD2A	Q9UIY3	292 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	TRPC6	Q9Y210	931 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	NFE2L3	Q9Y4A8	694 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	IGSF9B	Q9UPX0	1349 aa		10.49	□□□□□ -0.73
NXF1-209	ENST00000531474	PVALEF	A0A1B0GWK0	134 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	PP2D1	A8MPX8	630 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	HAS3	O00219	553 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	CCP110	O43303	1012 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	RHOBTB3	O94955	611 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	TUBB4A	P04350	444 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	P4HB	P07237	508 aa	Known RBP	10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	ZNF18	P17022	549 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	CCT6A	P40227	531 aa	Known RBP	10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	QARS	P47897	775 aa	Known RBP	10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	KCNJ6	P48051	423 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	SLC26A2	P50443	739 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	PSMC5	P62195	406 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	PRKCE	Q02156	737 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	PSMD2	Q13200	908 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	KARS	Q15046	597 aa	Known RBP	10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	PLCB4	Q15147	1175 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	COBLL1	Q53SF7	1204 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	CNNM4	Q6P4Q7	775 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	PLPPR4	Q7Z2D5	763 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	GRAMD1C	Q8IYS0	662 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	NEK9	Q8TD19	979 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	AFAP1L1	Q8TED9	768 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	NOC3L	Q8WTT2	800 aa	Known RBP	10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	ZNF830	Q96NB3	372 aa	Predicted RBP	10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	LXN	Q9BS40	222 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	GRIN2D	O15399	1336 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474	KDM3A	Q9Y4C1	1321 aa		10.48	□□□□□ -0.73
NXF1-209	ENST00000531474		A0A087WWV3	80 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	POTEB3	A0JP26	581 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	BICDL2	A1A5D9	508 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	LRRC10B	A6NIK2	292 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	PPP1R3G	B7ZBB8	358 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	ARVCF	O00192	962 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	ZNF862	O60290	1169 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	PQBP1	O60828	265 aa	Known RBP	10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	DKC1	O60832	514 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	OAT	P04181	439 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	SMIM10L2A	P0DMW4	78 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	SMIM10L2B	P0DMW5	78 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	SFPQ	P23246	707 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	IGBP1	P78318	339 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	PPFIA1	Q13136	1202 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	PAK1	Q13153	545 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	CUL4B	Q13620	913 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	CTTN	Q14247	550 aa	Known RBP	10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	LRRC26	Q2I0M4	334 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	TRIM60	Q495X7	471 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	HAUS3	Q68CZ6	603 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	POTEB	Q6S5H4	581 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	SLC39A5	Q6ZMH5	540 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	FILIP1	Q7Z7B0	1213 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	TPH2	Q8IWU9	490 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	SNX29	Q8TEQ0	813 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	ATP8B4	Q8TF62	1192 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	FAM167A	Q96KS9	214 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	RNPEP	Q9H4A4	650 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	ZSWIM4	Q9H7M6	989 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	KCND1	Q9NSA2	647 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	HDAC6	Q9UBN7	1215 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	ATP11B	Q9Y2G3	1177 aa		10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.47	□□□□□ -0.73
NXF1-209	ENST00000531474	C17orf102	A2RUQ5	167 aa		10.46	□□□□□ -0.73
NXF1-209	ENST00000531474	TMEM150B	A6NC51	233 aa		10.46	□□□□□ -0.73
NXF1-209	ENST00000531474	PSMA7	O14818	248 aa		10.46	□□□□□ -0.73
NXF1-209	ENST00000531474	MED24	O75448	989 aa		10.46	□□□□□ -0.73
NXF1-209	ENST00000531474	SLITRK3	O94933	977 aa		10.46	□□□□□ -0.73
NXF1-209	ENST00000531474	FGFR1OP	O95684	399 aa	Known RBP	10.46	□□□□□ -0.73
NXF1-209	ENST00000531474	SKIL	P12757	684 aa		10.46	□□□□□ -0.73

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