RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CDC45O75419 566 aa20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 CLCN3P51790 818 aa20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 CRYBB1P53674 252 aaPredicted RBP20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 SETQ01105 290 aaPredicted RBP20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 PRR16Q569H4 304 aa20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 HERC4Q5GLZ8 1057 aaPredicted RBP20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 ZNF746Q6NUN9 644 aaPredicted RBP20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 COLGALT1Q8NBJ5 622 aa20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 MICAL1Q8TDZ2 1067 aa20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 BRF1Q92994 677 aa20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 PHKBQ93100 1093 aa20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 TLE6Q9H808 572 aa20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 C6orf50Q9HD87 102 aa20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 TBC1D22BQ9NU19 505 aa20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 TYW1Q9NV66 732 aaKnown RBP20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 GABBR1Q9UBS5 961 aa20.89■□□□□ 0.93
SSSCA1-206ENST00000531405 FGF18O76093 207 aa20.88■□□□□ 0.93
SSSCA1-206ENST00000531405 HMGB1P09429 215 aaKnown RBP20.88■□□□□ 0.93
SSSCA1-206ENST00000531405 ERVFC1P60507 584 aa20.88■□□□□ 0.93
SSSCA1-206ENST00000531405 COASYQ13057 564 aa20.88■□□□□ 0.93
SSSCA1-206ENST00000531405 ODR4Q5SWX8 454 aa20.88■□□□□ 0.93
SSSCA1-206ENST00000531405 ALYREFQ86V81 257 aaKnown RBP20.88■□□□□ 0.93
SSSCA1-206ENST00000531405 THNSL1Q8IYQ7 743 aa20.88■□□□□ 0.93
SSSCA1-206ENST00000531405 JAKMIP1Q96N16 626 aaKnown RBP20.88■□□□□ 0.93
SSSCA1-206ENST00000531405 TLR9Q9NR96 1032 aa20.88■□□□□ 0.93
SSSCA1-206ENST00000531405 TCEAL9Q9UHQ7 104 aa20.88■□□□□ 0.93
SSSCA1-206ENST00000531405 USP15Q9Y4E8 981 aaPredicted RBP20.88■□□□□ 0.93
SSSCA1-206ENST00000531405 CCDC196A0A1B0GTZ2 297 aa20.87■□□□□ 0.93
SSSCA1-206ENST00000531405 PSAPP07602 524 aa20.87■□□□□ 0.93
SSSCA1-206ENST00000531405 DSC3Q14574 896 aa20.87■□□□□ 0.93
SSSCA1-206ENST00000531405 SMAP1Q8IYB5 467 aaPredicted RBP20.87■□□□□ 0.93
SSSCA1-206ENST00000531405 VN1R2Q8NFZ6 395 aa20.87■□□□□ 0.93
SSSCA1-206ENST00000531405 ZNF668Q96K58 619 aaPredicted RBP20.87■□□□□ 0.93
SSSCA1-206ENST00000531405 CWH43Q9H720 699 aa20.87■□□□□ 0.93
SSSCA1-206ENST00000531405 ATP6V0A4Q9HBG4 840 aa20.87■□□□□ 0.93
SSSCA1-206ENST00000531405 AAASQ9NRG9 546 aa20.87■□□□□ 0.93
SSSCA1-206ENST00000531405 TMEM161AQ9NX61 479 aa20.87■□□□□ 0.93
SSSCA1-206ENST00000531405 SAMM50Q9Y512 469 aa20.87■□□□□ 0.93
SSSCA1-206ENST00000531405 PCDHA10Q9Y5I2 948 aa20.87■□□□□ 0.93
SSSCA1-206ENST00000531405 KMT2EQ8IZD2 1858 aa20.87■□□□□ 0.93
SSSCA1-206ENST00000531405 NID2Q14112 1375 aa20.86■□□□□ 0.93
SSSCA1-206ENST00000531405 PRPF3O43395 683 aaKnown RBP20.86■□□□□ 0.93
SSSCA1-206ENST00000531405 UBE3AQ05086 875 aa20.86■□□□□ 0.93
SSSCA1-206ENST00000531405 CENPQQ7L2Z9 268 aaPredicted RBP20.86■□□□□ 0.93
SSSCA1-206ENST00000531405 LRRC71Q8N4P6 559 aa20.86■□□□□ 0.93
SSSCA1-206ENST00000531405 CCDC12Q8WUD4 166 aaPredicted RBP20.86■□□□□ 0.93
SSSCA1-206ENST00000531405 LENG9Q96B70 501 aa20.86■□□□□ 0.93
SSSCA1-206ENST00000531405 FBXL18Q96ME1 805 aa20.86■□□□□ 0.93
SSSCA1-206ENST00000531405 RNF216Q9NWF9 866 aaPredicted RBP20.86■□□□□ 0.93
SSSCA1-206ENST00000531405 AKT3Q9Y243 479 aa20.86■□□□□ 0.93
SSSCA1-206ENST00000531405 ZDBF2Q9HCK1 2354 aa20.85■□□□□ 0.93
SSSCA1-206ENST00000531405 NLRP11P59045 1033 aaKnown RBP20.85■□□□□ 0.93
SSSCA1-206ENST00000531405 FAM189BP81408 668 aa20.85■□□□□ 0.93
SSSCA1-206ENST00000531405 DUSP6Q16828 381 aa20.85■□□□□ 0.93
SSSCA1-206ENST00000531405 MCTP2Q6DN12 878 aa20.85■□□□□ 0.93
SSSCA1-206ENST00000531405 EFCAB12Q6NXP0 572 aa20.85■□□□□ 0.93
SSSCA1-206ENST00000531405 LRRC55Q6ZSA7 311 aa20.85■□□□□ 0.93
SSSCA1-206ENST00000531405 LINC01465Q8N7H1 131 aa20.85■□□□□ 0.93
SSSCA1-206ENST00000531405 RNF19AQ9NV58 838 aa20.85■□□□□ 0.93
SSSCA1-206ENST00000531405 SNX14Q9Y5W7 946 aa20.85■□□□□ 0.93
SSSCA1-206ENST00000531405 MYO10Q9HD67 2058 aa20.85■□□□□ 0.93
SSSCA1-206ENST00000531405 LOC730098B7Z3J9 87 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 FSCN2O14926 492 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 EDIL3O43854 480 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 ZNF862O60290 1169 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 GNA11P29992 359 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 CIITAP33076 1130 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 PBX3P40426 434 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 NHLH1Q02575 133 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 UGCGQ16739 394 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 PLPP4Q5VZY2 271 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 BLOC1S2Q6QNY1 142 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 FAM43BQ6ZT52 329 aaPredicted RBP20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 EDAQ92838 391 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 KCNB2Q92953 911 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 GJA10Q969M2 543 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 CASD1Q96PB1 797 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 ADAMTS10Q9H324 1103 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 ELAC1Q9H777 363 aaKnown RBP20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 VPS54Q9P1Q0 977 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 CEP131Q9UPN4 1083 aa20.84■□□□□ 0.93
SSSCA1-206ENST00000531405 WDR64B1ANS9 1081 aa20.83■□□□□ 0.93
SSSCA1-206ENST00000531405 MSH4O15457 936 aa20.83■□□□□ 0.93
SSSCA1-206ENST00000531405 MAGEB2O15479 319 aa20.83■□□□□ 0.93
SSSCA1-206ENST00000531405 CHMP2AO43633 222 aa20.83■□□□□ 0.93
SSSCA1-206ENST00000531405 LAG3P18627 525 aa20.83■□□□□ 0.93
SSSCA1-206ENST00000531405 PRKCEQ02156 737 aa20.83■□□□□ 0.93
SSSCA1-206ENST00000531405 NTRK3Q16288 839 aa20.83■□□□□ 0.93
SSSCA1-206ENST00000531405 RPGRIP1Q96KN7 1286 aa20.83■□□□□ 0.93
SSSCA1-206ENST00000531405 FAM167AQ96KS9 214 aa20.83■□□□□ 0.93
SSSCA1-206ENST00000531405 MAP7D2Q96T17 732 aa20.83■□□□□ 0.93
SSSCA1-206ENST00000531405 SLC26A6Q9BXS9 759 aa20.83■□□□□ 0.93
SSSCA1-206ENST00000531405 TMEM117Q9H0C3 514 aa20.83■□□□□ 0.93
SSSCA1-206ENST00000531405 DISC1Q9NRI5 854 aa20.83■□□□□ 0.93
SSSCA1-206ENST00000531405 OATP04181 439 aa20.82■□□□□ 0.92
SSSCA1-206ENST00000531405 FGFR4P22455 802 aa20.82■□□□□ 0.92
SSSCA1-206ENST00000531405 RPS6KB1P23443 525 aa20.82■□□□□ 0.92
SSSCA1-206ENST00000531405 HSPA4P34932 840 aa20.82■□□□□ 0.92
SSSCA1-206ENST00000531405 AKAP17AQ02040 695 aaKnown RBP20.82■□□□□ 0.92
SSSCA1-206ENST00000531405 RNF169Q8NCN4 708 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms