RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 CCDC43Q96MW1 224 aaKnown RBP17.07■□□□□ 0.32
CCS-206ENST00000530961 CEP89Q96ST8 783 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 MMTAG2Q9BU76 263 aaKnown RBP17.07■□□□□ 0.32
CCS-206ENST00000530961 C1QTNF1Q9BXJ1 281 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 NT5C3AQ9H0P0 336 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 DBR1Q9UK59 544 aaKnown RBP17.07■□□□□ 0.32
CCS-206ENST00000530961 RCOR1Q9UKL0 485 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 MYH7BA7E2Y1 1941 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 ALPK3Q96L96 1907 aa17.07■□□□□ 0.32
CCS-206ENST00000530961 FRMPD3Q5JV73 1810 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 IGKV6-21A0A0C4DH24 114 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 PP2D1A8MPX8 630 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 RSPH10B2B2RC85 870 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 ZBTB39O15060 712 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 RSPH10BP0C881 870 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 RFC2P35250 354 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 DNM2P50570 870 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 NPEPPSP55786 919 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 CDC42EP1Q00587 391 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 HYIQ5T013 277 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 IER5Q5VY09 327 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 PLA2G4FQ68DD2 849 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 EFCAB12Q6NXP0 572 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 POTEGQ6S5H5 508 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 LRRC8DQ7L1W4 858 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 CABP7Q86V35 215 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 KIAA0319LQ8IZA0 1049 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 ZNF579Q8NAF0 562 aaKnown RBP17.06■□□□□ 0.32
CCS-206ENST00000530961 PIGOQ8TEQ8 1089 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 DNAJB3Q8WWF6 145 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 SLC7A3Q8WY07 619 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 MYLIPQ8WY64 445 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 WNT8BQ93098 351 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 CALML4Q96GE6 196 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 CDK5RAP3Q96JB5 506 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 MAP7D2Q96T17 732 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 CCSER1Q9C0I3 900 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 CSRNP2Q9H175 543 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 WNT8AQ9H1J5 351 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 KIAA1024Q9UPX6 916 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 DNM3Q9UQ16 869 aa17.06■□□□□ 0.32
CCS-206ENST00000530961 UMODL1Q5DID0 1318 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 TMEM150BA6NC51 233 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 GAS2O43903 313 aaKnown RBP17.05■□□□□ 0.32
CCS-206ENST00000530961 DGAT1O75907 488 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 RARRES1P49788 294 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 CCL23P55773 120 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 MDM2Q00987 491 aaPredicted RBP17.05■□□□□ 0.32
CCS-206ENST00000530961 GRIN1Q05586 938 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 FPGSQ05932 587 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 PPIGQ13427 754 aaKnown RBP eCLIP17.05■□□□□ 0.321e-6■■□□□ 14.5
CCS-206ENST00000530961 ECM1Q16610 540 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 FAM26DQ5JW98 314 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 ZNF618Q5T7W0 954 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 RPUSD2Q8IZ73 545 aaKnown RBP17.05■□□□□ 0.32
CCS-206ENST00000530961 LINC01465Q8N7H1 131 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 ZBTB10Q96DT7 871 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 SCAND2PQ9GZW5 306 aaPredicted RBP17.05■□□□□ 0.32
CCS-206ENST00000530961 FAM49AQ9H0Q0 323 aaPredicted RBP17.05■□□□□ 0.32
CCS-206ENST00000530961 SEMA6BQ9H3T3 888 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 DHX33Q9H6R0 707 aaKnown RBP17.05■□□□□ 0.32
CCS-206ENST00000530961 DDX19AQ9NUU7 478 aaKnown RBP17.05■□□□□ 0.32
CCS-206ENST00000530961 SCN10AQ9Y5Y9 1956 aa17.05■□□□□ 0.32
CCS-206ENST00000530961 M0QZ92 97 aa17.04■□□□□ 0.32
CCS-206ENST00000530961 PFKMP08237 780 aa17.04■□□□□ 0.32
CCS-206ENST00000530961 TXLNAP40222 546 aa17.04■□□□□ 0.32
CCS-206ENST00000530961 POLGP54098 1239 aaPredicted RBP17.04■□□□□ 0.32
CCS-206ENST00000530961 TRAF7Q6Q0C0 670 aa17.04■□□□□ 0.32
CCS-206ENST00000530961 CLIC6Q96NY7 704 aa17.04■□□□□ 0.32
CCS-206ENST00000530961 IPO9Q96P70 1041 aaKnown RBP17.04■□□□□ 0.32
CCS-206ENST00000530961 SH2D3AQ9BRG2 576 aa17.04■□□□□ 0.32
CCS-206ENST00000530961 SUGCTQ9HAC7 445 aa17.04■□□□□ 0.32
CCS-206ENST00000530961 CHMP5Q9NZZ3 219 aa17.04■□□□□ 0.32
CCS-206ENST00000530961 CUTAO60888 179 aa17.03■□□□□ 0.32
CCS-206ENST00000530961 EYA4O95677 639 aa17.03■□□□□ 0.32
CCS-206ENST00000530961 CSF2RAP15509 400 aa17.03■□□□□ 0.32
CCS-206ENST00000530961 NCLP19338 710 aaKnown RBP17.03■□□□□ 0.32
CCS-206ENST00000530961 ME1P48163 572 aa17.03■□□□□ 0.32
CCS-206ENST00000530961 MRPS6P82932 125 aaKnown RBP17.03■□□□□ 0.32
CCS-206ENST00000530961 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
CCS-206ENST00000530961 LRRC71Q8N4P6 559 aa17.03■□□□□ 0.32
CCS-206ENST00000530961 RASSF8Q8NHQ8 419 aa17.03■□□□□ 0.32
CCS-206ENST00000530961 TCP11Q8WWU5 503 aa17.03■□□□□ 0.32
CCS-206ENST00000530961 SCLYQ96I15 445 aa17.03■□□□□ 0.32
CCS-206ENST00000530961 IL23AQ9NPF7 189 aa17.03■□□□□ 0.32
CCS-206ENST00000530961 CCDC39Q9UFE4 941 aa17.03■□□□□ 0.32
CCS-206ENST00000530961 SQORQ9Y6N5 450 aa17.03■□□□□ 0.32
CCS-206ENST00000530961 A0A087WWV3 80 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 ARHGEF35A5YM69 484 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 CHRNA1P02708 482 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 CTSHP09668 335 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 CLCN3P51790 818 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 GRB10Q13322 594 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 EMC2Q15006 297 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 TMEM119Q4V9L6 283 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 SPECC1Q5M775 1068 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 USP38Q8NB14 1042 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 LEO1Q8WVC0 666 aaPredicted RBP17.02■□□□□ 0.32
CCS-206ENST00000530961 EPSTI1Q96J88 318 aa17.02■□□□□ 0.32
CCS-206ENST00000530961 SPATA32Q96LK8 384 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms