RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 VPS54Q9P1Q0 977 aa23.5■■□□□ 1.35
TSPAN4-219ENST00000530404 ZNF318Q5VUA4 2279 aa23.5■■□□□ 1.35
TSPAN4-219ENST00000530404 TECTAO75443 2155 aa23.5■■□□□ 1.35
TSPAN4-219ENST00000530404 GPR182O15218 404 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 FGFR1P11362 822 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 RPS6KB1P23443 525 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 CRYBB1P53674 252 aaPredicted RBP23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 CCT2P78371 535 aaKnown RBP23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 AKAP17AQ02040 695 aaKnown RBP23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 NTRK3Q16288 839 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 CSPP1Q1MSJ5 1256 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 SLC24A5Q71RS6 500 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 SMAP1Q8IYB5 467 aaPredicted RBP23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 LRRC71Q8N4P6 559 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 GJA10Q969M2 543 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 PPP2R3CQ969Q6 453 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 LENG9Q96B70 501 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 MSLNLQ96KJ4 702 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 NCOA5Q9HCD5 579 aaKnown RBP23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 C1orf112Q9NSG2 853 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 CLEC1BQ9P126 229 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 MUTYHQ9UIF7 546 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 BARX2Q9UMQ3 279 aaPredicted RBP23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 PCDHA10Q9Y5I2 948 aa23.49■■□□□ 1.35
TSPAN4-219ENST00000530404 PER2O15055 1255 aa23.48■■□□□ 1.35
TSPAN4-219ENST00000530404 EDIL3O43854 480 aa23.48■■□□□ 1.35
TSPAN4-219ENST00000530404 GLP2RO95838 553 aa23.48■■□□□ 1.35
TSPAN4-219ENST00000530404 GNA11P29992 359 aa23.48■■□□□ 1.35
TSPAN4-219ENST00000530404 ODR4Q5SWX8 454 aa23.48■■□□□ 1.35
TSPAN4-219ENST00000530404 EFHBQ8N7U6 833 aa23.48■■□□□ 1.35
TSPAN4-219ENST00000530404 TYW1Q9NV66 732 aaKnown RBP23.48■■□□□ 1.35
TSPAN4-219ENST00000530404 AKT3Q9Y243 479 aa23.48■■□□□ 1.35
TSPAN4-219ENST00000530404 ARIH1Q9Y4X5 557 aaPredicted RBP23.48■■□□□ 1.35
TSPAN4-219ENST00000530404 PCDHB12Q9Y5F1 795 aa23.48■■□□□ 1.35
TSPAN4-219ENST00000530404 CHMP2AO43633 222 aa23.47■■□□□ 1.35
TSPAN4-219ENST00000530404 HOXD11P31277 338 aaPredicted RBP23.47■■□□□ 1.35
TSPAN4-219ENST00000530404 CIITAP33076 1130 aa23.47■■□□□ 1.35
TSPAN4-219ENST00000530404 RBM10P98175 930 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-219ENST00000530404 UGCGQ16739 394 aa23.47■■□□□ 1.35
TSPAN4-219ENST00000530404 MCTP2Q6DN12 878 aa23.47■■□□□ 1.35
TSPAN4-219ENST00000530404 EFCAB12Q6NXP0 572 aa23.47■■□□□ 1.35
TSPAN4-219ENST00000530404 COLGALT1Q8NBJ5 622 aa23.47■■□□□ 1.35
TSPAN4-219ENST00000530404 MICAL1Q8TDZ2 1067 aa23.47■■□□□ 1.35
TSPAN4-219ENST00000530404 MSH4O15457 936 aa23.46■■□□□ 1.35
TSPAN4-219ENST00000530404 ZNF862O60290 1169 aa23.46■■□□□ 1.35
TSPAN4-219ENST00000530404 FGF18O76093 207 aa23.46■■□□□ 1.35
TSPAN4-219ENST00000530404 NLRP11P59045 1033 aaKnown RBP23.46■■□□□ 1.35
TSPAN4-219ENST00000530404 DSC3Q14574 896 aa23.46■■□□□ 1.35
TSPAN4-219ENST00000530404 THNSL1Q8IYQ7 743 aa23.46■■□□□ 1.35
TSPAN4-219ENST00000530404 RNF26Q9BY78 433 aaPredicted RBP23.46■■□□□ 1.35
TSPAN4-219ENST00000530404 AGXT2Q9BYV1 514 aa23.46■■□□□ 1.35
TSPAN4-219ENST00000530404 CWH43Q9H720 699 aa23.46■■□□□ 1.35
TSPAN4-219ENST00000530404 TLE6Q9H808 572 aa23.46■■□□□ 1.35
TSPAN4-219ENST00000530404 ATP6V0A4Q9HBG4 840 aa23.46■■□□□ 1.35
TSPAN4-219ENST00000530404 WDR64B1ANS9 1081 aa23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 ERVFC1P60507 584 aa23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 PRKCEQ02156 737 aa23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 RNF135Q8IUD6 432 aa23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 LINC01465Q8N7H1 131 aa23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 CCDC148Q8NFR7 591 aa23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 BICD2Q8TD16 824 aa23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 CCDC136Q96JN2 1154 aa23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 POP1Q99575 1024 aaKnown RBP23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 UPF3BQ9BZI7 483 aaKnown RBP23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 TLR9Q9NR96 1032 aa23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 AAASQ9NRG9 546 aa23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 DISC1Q9NRI5 854 aa23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 TMEM161AQ9NX61 479 aa23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 CEP131Q9UPN4 1083 aa23.45■■□□□ 1.34
TSPAN4-219ENST00000530404 MYO10Q9HD67 2058 aa23.44■■□□□ 1.34
TSPAN4-219ENST00000530404 EYA4O95677 639 aa23.44■■□□□ 1.34
TSPAN4-219ENST00000530404 OATP04181 439 aa23.44■■□□□ 1.34
TSPAN4-219ENST00000530404 FGFR4P22455 802 aa23.44■■□□□ 1.34
TSPAN4-219ENST00000530404 PDIA3P30101 505 aaKnown RBP23.44■■□□□ 1.34
TSPAN4-219ENST00000530404 SMRP1Q8NCR6 262 aa23.44■■□□□ 1.34
TSPAN4-219ENST00000530404 FAM167AQ96KS9 214 aa23.44■■□□□ 1.34
TSPAN4-219ENST00000530404 ADAMTS10Q9H324 1103 aa23.44■■□□□ 1.34
TSPAN4-219ENST00000530404 UNC45AQ9H3U1 944 aa23.44■■□□□ 1.34
TSPAN4-219ENST00000530404 RNF19AQ9NV58 838 aa23.44■■□□□ 1.34
TSPAN4-219ENST00000530404 ARID2Q68CP9 1835 aa23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 MAGEB2O15479 319 aa23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 IFNAR1P17181 557 aa23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 PBX3P40426 434 aa23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 NLRP5P59047 1200 aa23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 FAM189BP81408 668 aa23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 PLPP4Q5VZY2 271 aa23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 LRRC55Q6ZSA7 311 aa23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 FBXL16Q8N461 479 aa23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 VN1R2Q8NFZ6 395 aa23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 CASD1Q96PB1 797 aa23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 MAP7D2Q96T17 732 aa23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 LARP6Q9BRS8 491 aaKnown RBP23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 RNF216Q9NWF9 866 aaPredicted RBP23.43■■□□□ 1.34
TSPAN4-219ENST00000530404 GAS7O60861 476 aa23.42■■□□□ 1.34
TSPAN4-219ENST00000530404 UBE3AQ05086 875 aa23.42■■□□□ 1.34
TSPAN4-219ENST00000530404 COASYQ13057 564 aa23.42■■□□□ 1.34
TSPAN4-219ENST00000530404 LRCH2Q5VUJ6 765 aa23.42■■□□□ 1.34
TSPAN4-219ENST00000530404 HFE2Q6ZVN8 426 aa23.42■■□□□ 1.34
TSPAN4-219ENST00000530404 TEKT3Q9BXF9 490 aa23.42■■□□□ 1.34
TSPAN4-219ENST00000530404 ELAC1Q9H777 363 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms