RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 EMC2Q15006 297 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 LRRC41Q15345 812 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 KMT5BQ4FZB7 885 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 RBM43Q6ZSC3 357 aaKnown RBP11.83□□□□□ -0.52
SOX6-213ENST00000530378 LRRC71Q8N4P6 559 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 BBXQ8WY36 941 aaPredicted RBP11.83□□□□□ -0.52
SOX6-213ENST00000530378 PPP1R16BQ96T49 567 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 C7orf25Q9BPX7 421 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 NRBP2Q9NSY0 501 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 GDAQ9Y2T3 454 aa11.83□□□□□ -0.52
SOX6-213ENST00000530378 FAM13AO94988 1023 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 SMIM10L2AP0DMW4 78 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 SMIM10L2BP0DMW5 78 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 TYRO3Q06418 890 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 COASYQ13057 564 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 DRP2Q13474 957 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 GIT2Q14161 759 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 FAM47CQ5HY64 1035 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 SASS6Q6UVJ0 657 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 SFR1Q86XK3 245 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 GLIS3Q8NEA6 775 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 VTI1AQ96AJ9 217 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 TMEM143Q96AN5 459 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 ZNF668Q96K58 619 aaPredicted RBP11.82□□□□□ -0.52
SOX6-213ENST00000530378 FGFBP2Q9BYJ0 223 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 SUGCTQ9HAC7 445 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 ATP6V0A4Q9HBG4 840 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 XPNPEP1Q9NQW7 623 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 EXOC1Q9NV70 894 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 SETD4Q9NVD3 440 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 PANK4Q9NVE7 773 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 MAPK8IP1Q9UQF2 711 aa11.82□□□□□ -0.52
SOX6-213ENST00000530378 GJB1P08034 283 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 CLCN3P51790 818 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 TBC1D8BQ0IIM8 1120 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 GRIK4Q16099 956 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 DPCR1Q3MIW9 517 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 RNF180Q86T96 592 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 DAW1Q8N136 415 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 METTL13Q8N6R0 699 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 KLHDC9Q8NEP7 349 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 LMBR1Q8WVP7 490 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 ZNF333Q96JL9 665 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 MTG1Q9BT17 334 aaPredicted RBP11.81□□□□□ -0.52
SOX6-213ENST00000530378 KIFC3Q9BVG8 833 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 NIFKQ9BYG3 293 aaKnown RBP11.81□□□□□ -0.52
SOX6-213ENST00000530378 POLR3FQ9H1D9 316 aaPredicted RBP11.81□□□□□ -0.52
SOX6-213ENST00000530378 PAK6Q9NQU5 681 aaPredicted RBP11.81□□□□□ -0.52
SOX6-213ENST00000530378 TUBE1Q9UJT0 475 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 ZEB2O60315 1214 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 HBP1O60381 514 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 MSCO60682 206 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 BMP6P22004 513 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 SLC26A2P50443 739 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 ZNF200P98182 395 aaPredicted RBP11.81□□□□□ -0.52
SOX6-213ENST00000530378 MAPK7Q13164 816 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 HIC1Q14526 733 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 TARBP2Q15633 366 aaKnown RBP11.81□□□□□ -0.52
SOX6-213ENST00000530378 HERC4Q5GLZ8 1057 aaPredicted RBP11.81□□□□□ -0.52
SOX6-213ENST00000530378 C11orf57Q6ZUT1 292 aaPredicted RBP11.81□□□□□ -0.52
SOX6-213ENST00000530378 MYCT1Q8N699 235 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 SLC7A3Q8WY07 619 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 CEP89Q96ST8 783 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 LRRC27Q9C0I9 530 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 DNAJC25Q9H1X3 360 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 SLC39A2Q9NP94 309 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 HDAC6Q9UBN7 1215 aa11.81□□□□□ -0.52
SOX6-213ENST00000530378 DGAT1O75907 488 aa11.8□□□□□ -0.52
SOX6-213ENST00000530378 C22orf31O95567 290 aa11.8□□□□□ -0.52
SOX6-213ENST00000530378 XRCC6P12956 609 aaKnown RBP eCLIP11.8□□□□□ -0.52
SOX6-213ENST00000530378 ACLYP53396 1101 aa11.8□□□□□ -0.52
SOX6-213ENST00000530378 NBPF20Q3BBV1 942 aa11.8□□□□□ -0.52
SOX6-213ENST00000530378 ANO6Q4KMQ2 910 aa11.8□□□□□ -0.52
SOX6-213ENST00000530378 KLHL10Q6JEL2 608 aa11.8□□□□□ -0.52
SOX6-213ENST00000530378 UNC13DQ70J99 1090 aa11.8□□□□□ -0.52
SOX6-213ENST00000530378 ELOA2Q8IYF1 753 aaPredicted RBP11.8□□□□□ -0.52
SOX6-213ENST00000530378 C7orf31Q8N865 590 aa11.8□□□□□ -0.52
SOX6-213ENST00000530378 BSNDQ8WZ55 320 aa11.8□□□□□ -0.52
SOX6-213ENST00000530378 FAM49AQ9H0Q0 323 aaPredicted RBP11.8□□□□□ -0.52
SOX6-213ENST00000530378 CCDC192P0DO97 292 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 GUCY2CP25092 1073 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 CST5P28325 142 aaPredicted RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 NMT1P30419 496 aaKnown RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 SARSP49591 514 aaKnown RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 CASP5P51878 434 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 TMEM62Q0P6H9 643 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 STK4Q13043 487 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 MORC3Q14149 939 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 STX1AQ16623 288 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 NT5DC1Q5TFE4 455 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 CCSAPQ6IQ19 270 aaPredicted RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 LRSAM1Q6UWE0 723 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 KSR1Q8IVT5 923 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 CCDC65Q8IXS2 484 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 KCTD17Q8N5Z5 321 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 PCSK9Q8NBP7 692 aaKnown RBP11.79□□□□□ -0.52
SOX6-213ENST00000530378 SPATA20Q8TB22 786 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 ASAP3Q8TDY4 903 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 FUCA2Q9BTY2 467 aa11.79□□□□□ -0.52
SOX6-213ENST00000530378 KATNAL1Q9BW62 490 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms