RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 KANK2Q63ZY3 851 aa8.02□□□□□ -1.13
CASP4-208ENST00000530309 PGM2L1Q6PCE3 622 aa8.02□□□□□ -1.13
CASP4-208ENST00000530309 UNQ6494/PRO21346Q6UXR6 183 aa8.02□□□□□ -1.13
CASP4-208ENST00000530309 ATG14Q6ZNE5 492 aa8.02□□□□□ -1.13
CASP4-208ENST00000530309 CXXC5Q7LFL8 322 aaKnown RBP8.02□□□□□ -1.13
CASP4-208ENST00000530309 C1orf162Q8NEQ5 155 aaPredicted RBP8.02□□□□□ -1.13
CASP4-208ENST00000530309 FNIP1Q8TF40 1166 aa8.02□□□□□ -1.13
CASP4-208ENST00000530309 TGFBRAP1Q8WUH2 860 aa8.02□□□□□ -1.13
CASP4-208ENST00000530309 RPGRQ92834 1020 aaKnown RBP8.02□□□□□ -1.13
CASP4-208ENST00000530309 FAXDC2Q96IV6 333 aa8.02□□□□□ -1.13
CASP4-208ENST00000530309 PPP1R16BQ96T49 567 aa8.02□□□□□ -1.13
CASP4-208ENST00000530309 H2AFYO75367 372 aaKnown RBP8.01□□□□□ -1.13
CASP4-208ENST00000530309 KRT1P04264 644 aa8.01□□□□□ -1.13
CASP4-208ENST00000530309 RBP3P10745 1247 aa8.01□□□□□ -1.13
CASP4-208ENST00000530309 SSPNQ14714 243 aa8.01□□□□□ -1.13
CASP4-208ENST00000530309 UGT8Q16880 541 aa8.01□□□□□ -1.13
CASP4-208ENST00000530309 CT83Q5H943 113 aa8.01□□□□□ -1.13
CASP4-208ENST00000530309 CCDC62Q6P9F0 684 aa8.01□□□□□ -1.13
CASP4-208ENST00000530309 CNKSR3Q6P9H4 555 aa8.01□□□□□ -1.13
CASP4-208ENST00000530309 ZBTB46Q86UZ6 589 aa8.01□□□□□ -1.13
CASP4-208ENST00000530309 AMOTL1Q8IY63 956 aa8.01□□□□□ -1.13
CASP4-208ENST00000530309 EAF2Q96CJ1 260 aaPredicted RBP8.01□□□□□ -1.13
CASP4-208ENST00000530309 SLC13A1Q9BZW2 595 aa8.01□□□□□ -1.13
CASP4-208ENST00000530309 EPB41L4AQ9HCS5 686 aaPredicted RBP8.01□□□□□ -1.13
CASP4-208ENST00000530309 MKS1Q9NXB0 559 aa8.01□□□□□ -1.13
CASP4-208ENST00000530309 RNF114Q9Y508 228 aa8.01□□□□□ -1.13
CASP4-208ENST00000530309 NUMBLQ9Y6R0 609 aa8.01□□□□□ -1.13
CASP4-208ENST00000530309 TCAF2A6NFQ2 919 aa8□□□□□ -1.13
CASP4-208ENST00000530309 FZD9O00144 591 aa8□□□□□ -1.13
CASP4-208ENST00000530309 MAFGO15525 162 aa8□□□□□ -1.13
CASP4-208ENST00000530309 MAFO75444 373 aaPredicted RBP8□□□□□ -1.13
CASP4-208ENST00000530309 KNG1P01042 644 aa8□□□□□ -1.13
CASP4-208ENST00000530309 PI3P19957 117 aa8□□□□□ -1.13
CASP4-208ENST00000530309 NFATC3Q12968 1075 aa8□□□□□ -1.13
CASP4-208ENST00000530309 PITRM1Q5JRX3 1037 aa8□□□□□ -1.13
CASP4-208ENST00000530309 TTLL7Q6ZT98 887 aa8□□□□□ -1.13
CASP4-208ENST00000530309 PWWP2AQ96N64 755 aa8□□□□□ -1.13
CASP4-208ENST00000530309 SLC38A3Q99624 504 aa8□□□□□ -1.13
CASP4-208ENST00000530309 MTG2Q9H4K7 406 aa8□□□□□ -1.13
CASP4-208ENST00000530309 CCM2LQ9NUG4 571 aaPredicted RBP8□□□□□ -1.13
CASP4-208ENST00000530309 TMPRSS11EQ9UL52 423 aa8□□□□□ -1.13
CASP4-208ENST00000530309 DENND2AQ9ULE3 1009 aa8□□□□□ -1.13
CASP4-208ENST00000530309 EID1Q9Y6B2 187 aa8□□□□□ -1.13
CASP4-208ENST00000530309 PFKMP08237 780 aa7.99□□□□□ -1.13
CASP4-208ENST00000530309 CCND1P24385 295 aa7.99□□□□□ -1.13
CASP4-208ENST00000530309 MLLT6P55198 1093 aaPredicted RBP7.99□□□□□ -1.13
CASP4-208ENST00000530309 KRT85P78386 507 aa7.99□□□□□ -1.13
CASP4-208ENST00000530309 CD83Q01151 205 aa7.99□□□□□ -1.13
CASP4-208ENST00000530309 PCBP2Q15366 365 aaKnown RBP eCLIP7.99□□□□□ -1.13
CASP4-208ENST00000530309 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.99□□□□□ -1.13
CASP4-208ENST00000530309 WDR72Q3MJ13 1102 aa7.99□□□□□ -1.13
CASP4-208ENST00000530309 PRR31Q5SQ13 230 aa7.99□□□□□ -1.13
CASP4-208ENST00000530309 RAVER1Q8IY67 606 aaKnown RBP7.99□□□□□ -1.13
CASP4-208ENST00000530309 BHLHE22Q8NFJ8 381 aaPredicted RBP7.99□□□□□ -1.13
CASP4-208ENST00000530309 PITHD1Q9GZP4 211 aaPredicted RBP7.99□□□□□ -1.13
CASP4-208ENST00000530309 AASDHPPTQ9NRN7 309 aa7.99□□□□□ -1.13
CASP4-208ENST00000530309 SPATA6Q9NWH7 488 aaPredicted RBP7.99□□□□□ -1.13
CASP4-208ENST00000530309 KCMF1Q9P0J7 381 aa7.99□□□□□ -1.13
CASP4-208ENST00000530309 CNOT6Q9ULM6 557 aaKnown RBP7.99□□□□□ -1.13
CASP4-208ENST00000530309 SMG5Q9UPR3 1016 aaKnown RBP7.99□□□□□ -1.13
CASP4-208ENST00000530309 KCTD3Q9Y597 815 aa7.99□□□□□ -1.13
CASP4-208ENST00000530309 MRFAP1Q9Y605 127 aa7.99□□□□□ -1.13
CASP4-208ENST00000530309 MYPNQ86TC9 1320 aa7.99□□□□□ -1.13
CASP4-208ENST00000530309 H0Y858 1186 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 PAX4O43316 350 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 C1QTNF9P0C862 333 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 COL6A1P12109 1028 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 MAP3K12Q12852 859 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 OGFOD2Q6N063 350 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 SAPCD2Q86UD0 394 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 LYSMD2Q8IV50 215 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 RSAD2Q8WXG1 361 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 HOOK2Q96ED9 719 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 RAX2Q96IS3 184 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 CD320Q9NPF0 282 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 DNAJC28Q9NX36 388 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 FTSJ1Q9UET6 329 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 TCEAL9Q9UHQ7 104 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 EDARQ9UNE0 448 aa7.98□□□□□ -1.13
CASP4-208ENST00000530309 A0A0A6YYJ9 748 aa7.97□□□□□ -1.13
CASP4-208ENST00000530309 OPHN1O60890 802 aa7.97□□□□□ -1.13
CASP4-208ENST00000530309 PCDH8O95206 1070 aa7.97□□□□□ -1.13
CASP4-208ENST00000530309 TSPAN15O95858 294 aa7.97□□□□□ -1.13
CASP4-208ENST00000530309 LPLP06858 475 aa7.97□□□□□ -1.13
CASP4-208ENST00000530309 RPL13P26373 211 aaKnown RBP7.97□□□□□ -1.13
CASP4-208ENST00000530309 IL13P35225 146 aa7.97□□□□□ -1.13
CASP4-208ENST00000530309 RAB27AP51159 221 aa7.97□□□□□ -1.13
CASP4-208ENST00000530309 MRPS9P82933 396 aaKnown RBP7.97□□□□□ -1.13
CASP4-208ENST00000530309 SRSF2Q01130 221 aaKnown RBP7.97□□□□□ -1.13
CASP4-208ENST00000530309 CAP1Q01518 475 aa7.97□□□□□ -1.13
CASP4-208ENST00000530309 DLX2Q07687 328 aaPredicted RBP7.97□□□□□ -1.13
CASP4-208ENST00000530309 CLUL1Q15846 466 aa7.97□□□□□ -1.13
CASP4-208ENST00000530309 TRMT10BQ6PF06 316 aaKnown RBP7.97□□□□□ -1.13
CASP4-208ENST00000530309 PNMA8AQ86V59 439 aaPredicted RBP7.97□□□□□ -1.13
CASP4-208ENST00000530309 POU5F2Q8N7G0 328 aa7.97□□□□□ -1.13
CASP4-208ENST00000530309 QRSL1Q9H0R6 528 aaKnown RBP7.97□□□□□ -1.13
CASP4-208ENST00000530309 KCTD10Q9H3F6 313 aa7.97□□□□□ -1.13
CASP4-208ENST00000530309 FBXO10Q9UK96 956 aa7.97□□□□□ -1.13
CASP4-208ENST00000530309 E2F8A0AVK6 867 aa7.96□□□□□ -1.14
CASP4-208ENST00000530309 KLHL33A6NCF5 533 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms