RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 TMEM40Q8WWA1 233 aa17.68■□□□□ 0.42
CTSB-215ENST00000528965 PHKBQ93100 1093 aa17.68■□□□□ 0.42
CTSB-215ENST00000528965 UIMC1Q96RL1 719 aa17.68■□□□□ 0.42
CTSB-215ENST00000528965 PPP1R16BQ96T49 567 aa17.68■□□□□ 0.42
CTSB-215ENST00000528965 SLC26A6Q9BXS9 759 aa17.68■□□□□ 0.42
CTSB-215ENST00000528965 C22orf23Q9BZE7 217 aa17.68■□□□□ 0.42
CTSB-215ENST00000528965 TMEM161AQ9NX61 479 aa17.68■□□□□ 0.42
CTSB-215ENST00000528965 AKT3Q9Y243 479 aa17.68■□□□□ 0.42
CTSB-215ENST00000528965 KIAA1671Q9BY89 1806 aa17.68■□□□□ 0.42
CTSB-215ENST00000528965 C9IYK1 514 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 MGEA5O60502 916 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 VTNP04004 478 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 IFNAR1P17181 557 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 LAG3P18627 525 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 DNAJB1P25685 340 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 SFNP31947 248 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 GTF2F1P35269 517 aaKnown RBP eCLIP17.67■□□□□ 0.42
CTSB-215ENST00000528965 NRIP1P48552 1158 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 JAK3P52333 1124 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 DLX2Q07687 328 aaPredicted RBP17.67■□□□□ 0.42
CTSB-215ENST00000528965 ADAM15Q13444 863 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 FAM228AQ86W67 206 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 TRIM22Q8IYM9 498 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 THNSL1Q8IYQ7 743 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 MICAL1Q8TDZ2 1067 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 ELAC1Q9H777 363 aaKnown RBP17.67■□□□□ 0.42
CTSB-215ENST00000528965 CDHR5Q9HBB8 845 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 SH3GLB2Q9NR46 395 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 TLR9Q9NR96 1032 aa17.67■□□□□ 0.42
CTSB-215ENST00000528965 LOXHD1Q8IVV2 1947 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 LINC01565O15544 149 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 GAS7O60861 476 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 OATP04181 439 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 SRGAP2BP0DMP2 458 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 ZSCAN20P17040 1043 aaPredicted RBP17.66■□□□□ 0.42
CTSB-215ENST00000528965 ATP4AP20648 1035 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 IRS1P35568 1242 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 PDE12Q6L8Q7 609 aaKnown RBP17.66■□□□□ 0.42
CTSB-215ENST00000528965 TRMT1LQ7Z2T5 733 aaKnown RBP17.66■□□□□ 0.42
CTSB-215ENST00000528965 ABI1Q8IZP0 508 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 RASGRP4Q8TDF6 673 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 SCLT1Q96NL6 688 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 RIT2Q99578 217 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 CDCA3Q99618 268 aaPredicted RBP17.66■□□□□ 0.42
CTSB-215ENST00000528965 TEKT3Q9BXF9 490 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 AGXT2Q9BYV1 514 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 DISC1Q9NRI5 854 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 NRBP2Q9NSY0 501 aa17.66■□□□□ 0.42
CTSB-215ENST00000528965 PPFIA3O75145 1194 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 GPR32O75388 356 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 FGF18O76093 207 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 EYA4O95677 639 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 USP11P51784 963 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 CLCN3P51790 818 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 NLRP5P59047 1200 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 PRKCEQ02156 737 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 COASYQ13057 564 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 EFCAB12Q6NXP0 572 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 ADGRD2Q7Z7M1 963 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 LRRC43Q8N309 656 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 COLGALT1Q8NBJ5 622 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 SMRP1Q8NCR6 262 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 LENG9Q96B70 501 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 MSLNLQ96KJ4 702 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 TMEM117Q9H0C3 514 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 TLE6Q9H808 572 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 VPS54Q9P1Q0 977 aa17.65■□□□□ 0.42
CTSB-215ENST00000528965 MYH9P35579 1960 aaKnown RBP17.64■□□□□ 0.41
CTSB-215ENST00000528965 CENPBP07199 599 aaPredicted RBP17.64■□□□□ 0.41
CTSB-215ENST00000528965 PPM1AP35813 382 aa17.64■□□□□ 0.41
CTSB-215ENST00000528965 NLRP11P59045 1033 aaKnown RBP17.64■□□□□ 0.41
CTSB-215ENST00000528965 NTRK3Q16288 839 aa17.64■□□□□ 0.41
CTSB-215ENST00000528965 FAM102BQ5T8I3 360 aa17.64■□□□□ 0.41
CTSB-215ENST00000528965 LRCH2Q5VUJ6 765 aa17.64■□□□□ 0.41
CTSB-215ENST00000528965 RBM23Q86U06 439 aaKnown RBP17.64■□□□□ 0.41
CTSB-215ENST00000528965 RDM1Q8NG50 284 aa17.64■□□□□ 0.41
CTSB-215ENST00000528965 TYW1Q9NV66 732 aaKnown RBP17.64■□□□□ 0.41
CTSB-215ENST00000528965 PUF60Q9UHX1 559 aaKnown RBP17.64■□□□□ 0.41
CTSB-215ENST00000528965 LZTS1Q9Y250 596 aa17.64■□□□□ 0.41
CTSB-215ENST00000528965 CPLX1O14810 134 aa17.63■□□□□ 0.41
CTSB-215ENST00000528965 ADAMTS3O15072 1205 aa17.63■□□□□ 0.41
CTSB-215ENST00000528965 MSH4O15457 936 aa17.63■□□□□ 0.41
CTSB-215ENST00000528965 EPB41L2O43491 1005 aaKnown RBP17.63■□□□□ 0.41
CTSB-215ENST00000528965 CHMP2AO43633 222 aa17.63■□□□□ 0.41
CTSB-215ENST00000528965 FGFR1P11362 822 aa17.63■□□□□ 0.41
CTSB-215ENST00000528965 EIF4BP23588 611 aaKnown RBP17.63■□□□□ 0.41
CTSB-215ENST00000528965 HOXD11P31277 338 aaPredicted RBP17.63■□□□□ 0.41
CTSB-215ENST00000528965 EVCP57679 992 aa17.63■□□□□ 0.41
CTSB-215ENST00000528965 FAM189BP81408 668 aa17.63■□□□□ 0.41
CTSB-215ENST00000528965 TBC1D8BQ0IIM8 1120 aa17.63■□□□□ 0.41
CTSB-215ENST00000528965 DSC3Q14574 896 aa17.63■□□□□ 0.41
CTSB-215ENST00000528965 HERC4Q5GLZ8 1057 aaPredicted RBP17.63■□□□□ 0.41
CTSB-215ENST00000528965 CPLX2Q6PUV4 134 aaKnown RBP17.63■□□□□ 0.41
CTSB-215ENST00000528965 FAM177A1Q8N128 213 aaPredicted RBP17.63■□□□□ 0.41
CTSB-215ENST00000528965 LRRC71Q8N4P6 559 aa17.63■□□□□ 0.41
CTSB-215ENST00000528965 LINC01465Q8N7H1 131 aa17.63■□□□□ 0.41
CTSB-215ENST00000528965 SLC5A5Q92911 643 aa17.63■□□□□ 0.41
CTSB-215ENST00000528965 BARX2Q9UMQ3 279 aaPredicted RBP17.63■□□□□ 0.41
CTSB-215ENST00000528965 PDIA3P30101 505 aaKnown RBP17.62■□□□□ 0.41
CTSB-215ENST00000528965 CDC42EP1Q00587 391 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms