RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 PGRMC1O00264 195 aaKnown RBP9.13□□□□□ -0.95
CSTF3-208ENST00000528865 SART1O43290 800 aaKnown RBP9.13□□□□□ -0.95
CSTF3-208ENST00000528865 CEP104O60308 925 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 TBCAO75347 108 aaKnown RBP9.13□□□□□ -0.95
CSTF3-208ENST00000528865 PSMD10O75832 226 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 TMEM253P0C7T8 217 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 LMNB1P20700 586 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 PDE6BP35913 854 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 NOP2P46087 812 aaKnown RBP9.13□□□□□ -0.95
CSTF3-208ENST00000528865 GALCP54803 685 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 HADHBP55084 474 aaKnown RBP9.13□□□□□ -0.95
CSTF3-208ENST00000528865 PPP2R5AQ15172 486 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 TRADDQ15628 312 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 PPP2R5EQ16537 467 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 ABCB5Q2M3G0 1257 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 AGBL2Q5U5Z8 902 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 B4GALNT4Q76KP1 1039 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 ZNF720Q7Z2F6 126 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 ARFGAP2Q8N6H7 521 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 BCAS4Q8TDM0 211 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 PPM1EQ8WY54 764 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 MASTLQ96GX5 879 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 DEFB129Q9H1M3 183 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 BHMT2Q9H2M3 363 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 SERPINA10Q9UK55 444 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 USP20Q9Y2K6 914 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 NRXN2Q9P2S2 1712 aa9.13□□□□□ -0.95
CSTF3-208ENST00000528865 ZMYM2Q9UBW7 1377 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 FRMPD4Q14CM0 1322 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 ESYT3A0FGR9 886 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 SHTN1A0MZ66 631 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 ZSCAN5CA6NGD5 496 aaPredicted RBP9.12□□□□□ -0.95
CSTF3-208ENST00000528865 CLIC2O15247 247 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 DDX3YO15523 660 aaKnown RBP9.12□□□□□ -0.95
CSTF3-208ENST00000528865 PLA2G6O60733 806 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 FAM13AO94988 1023 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 GCNT3O95395 438 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 CCDC172P0C7W6 258 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 MAPTP10636 758 aaKnown RBP9.12□□□□□ -0.95
CSTF3-208ENST00000528865 POLD1P28340 1107 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 MDH1P40925 334 aaKnown RBP9.12□□□□□ -0.95
CSTF3-208ENST00000528865 CCT5P48643 541 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 FMO5P49326 533 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 GUCY2FP51841 1108 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 JAG1P78504 1218 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 ITGB3BPQ13352 177 aaPredicted RBP9.12□□□□□ -0.95
CSTF3-208ENST00000528865 PLS1Q14651 629 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 ENOX2Q16206 610 aaKnown RBP9.12□□□□□ -0.95
CSTF3-208ENST00000528865 UAP1Q16222 522 aaPredicted RBP9.12□□□□□ -0.95
CSTF3-208ENST00000528865 SHROOM1Q2M3G4 852 aaPredicted RBP9.12□□□□□ -0.95
CSTF3-208ENST00000528865 RBM26Q5T8P6 1007 aaKnown RBP9.12□□□□□ -0.95
CSTF3-208ENST00000528865 PEX26Q7Z412 305 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 TADA2BQ86TJ2 420 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 KLHL7Q8IXQ5 586 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 FAM186BQ8IYM0 893 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 C3orf20Q8ND61 904 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 CCDC26Q8TAB7 109 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 CYP2W1Q8TAV3 490 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 U2AF1L4Q8WU68 220 aaKnown RBP9.12□□□□□ -0.95
CSTF3-208ENST00000528865 RNPC3Q96LT9 517 aaKnown RBP9.12□□□□□ -0.95
CSTF3-208ENST00000528865 NACC1Q96RE7 527 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 UIMC1Q96RL1 719 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 WDR18Q9BV38 432 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 TRIM34Q9BYJ4 488 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 TXLNGYQ9BZA5 131 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 GPR88Q9GZN0 384 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 EPN3Q9H201 632 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 PARVGQ9HBI0 331 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 FAM114A2Q9NRY5 505 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 RGL1Q9NZL6 768 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 DNAJC12Q9UKB3 198 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 AMFRQ9UKV5 643 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 ODF2LQ9ULJ1 636 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 PRR12Q9ULL5 1215 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 NOC2LQ9Y3T9 749 aaKnown RBP9.12□□□□□ -0.95
CSTF3-208ENST00000528865 PCDHB13Q9Y5F0 798 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 FAM169AQ9Y6X4 670 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 ANKRD31Q8N7Z5 1873 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 KIF13BQ9NQT8 1826 aa9.12□□□□□ -0.95
CSTF3-208ENST00000528865 A0A1W2PRG0 241 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 F8VZ95 297 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 G3V3G9 751 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 PMM2O15305 246 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 P4HA2O15460 535 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 PPP1R12BO60237 982 aaPredicted RBP9.11□□□□□ -0.95
CSTF3-208ENST00000528865 EVI5O60447 810 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 PPP1R37O75864 691 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 TRIM37O94972 964 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 KRT14P02533 472 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 NR1D1P20393 614 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 RFX1P22670 979 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 GUCY2CP25092 1073 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 NMT1P30419 496 aaKnown RBP9.11□□□□□ -0.95
CSTF3-208ENST00000528865 LSP1P33241 339 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 ZNF76P36508 570 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 HSD17B3P37058 310 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 PRELPP51888 382 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 DRG2P55039 364 aaKnown RBP9.11□□□□□ -0.95
CSTF3-208ENST00000528865 RNASE9P60153 205 aaKnown RBP9.11□□□□□ -0.95
CSTF3-208ENST00000528865 SNAP25P60880 206 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms