RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 ZNF211Q13398 564 aaPredicted RBP19.33■□□□□ 0.68
LTBP3-210ENST00000528516 SEPT2Q15019 361 aa19.33■□□□□ 0.68
LTBP3-210ENST00000528516 ABCB5Q2M3G0 1257 aa19.33■□□□□ 0.68
LTBP3-210ENST00000528516 TTI2Q6NXR4 508 aa19.33■□□□□ 0.68
LTBP3-210ENST00000528516 ZNF34Q8IZ26 560 aa19.33■□□□□ 0.68
LTBP3-210ENST00000528516 ECT2Q9H8V3 914 aa19.33■□□□□ 0.68
LTBP3-210ENST00000528516 MYH10P35580 1976 aa19.33■□□□□ 0.68
LTBP3-210ENST00000528516 HIP1RO75146 1068 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 GRIK3Q13003 919 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 TRPM8Q7Z2W7 1104 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 PLVAPQ9BX97 442 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 PPP1R12CQ9BZL4 782 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 CNOT10Q9H9A5 744 aaKnown RBP19.32■□□□□ 0.68
LTBP3-210ENST00000528516 LRRD1A4D1F6 860 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 ORC4O43929 436 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 LUC7L3O95232 432 aaKnown RBP19.32■□□□□ 0.68
LTBP3-210ENST00000528516 C3orf20Q8ND61 904 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 FBF1Q8TES7 1133 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 TDRD3Q9H7E2 651 aaKnown RBP19.32■□□□□ 0.68
LTBP3-210ENST00000528516 ARHGEF10LQ9HCE6 1279 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 MTUS1Q9ULD2 1270 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 KLRC1P26715 233 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 ZBTB16Q05516 673 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 NBPF20Q3BBV1 942 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 TMED8Q6PL24 325 aaPredicted RBP19.32■□□□□ 0.68
LTBP3-210ENST00000528516 LMNTD2Q8IXW0 634 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 LRRC34Q8IZ02 419 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 ISCUQ9H1K1 167 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 IGF2BP3O00425 579 aaKnown RBP eCLIP19.32■□□□□ 0.68
LTBP3-210ENST00000528516 SART1O43290 800 aaKnown RBP19.32■□□□□ 0.68
LTBP3-210ENST00000528516 CD19P15391 556 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 KCNJ2P63252 427 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 SLMAPQ14BN4 828 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 DLGAP5Q15398 846 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 ALKBH5Q6P6C2 394 aaKnown RBP19.32■□□□□ 0.68
LTBP3-210ENST00000528516 MREGQ8N565 214 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 GCNT4Q9P109 453 aa19.32■□□□□ 0.68
LTBP3-210ENST00000528516 H0YIN7 160 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 ARL6IP4Q66PJ3 421 aaKnown RBP19.31■□□□□ 0.68
LTBP3-210ENST00000528516 KAZNQ674X7 775 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 PTF1AQ7RTS3 328 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 AMNQ9BXJ7 453 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 TRIM9Q9C026 710 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 CFAP73A6NFT4 308 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 CAND2O75155 1236 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 CAMTA2O94983 1202 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 GH2P01242 217 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 ACTN1P12814 892 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 DRD4P21917 467 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 PCDHA6Q9UN73 950 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 PCDHA8Q9Y5H6 950 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 XKR9Q5GH70 373 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 ARMC3Q5W041 872 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 DENND2CQ68D51 928 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 RNF10Q8N5U6 811 aaKnown RBP19.31■□□□□ 0.68
LTBP3-210ENST00000528516 USP38Q8NB14 1042 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 PRMT1Q99873 361 aaKnown RBP19.31■□□□□ 0.68
LTBP3-210ENST00000528516 IMPG2Q9BZV3 1241 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 MLXIPLQ9NP71 852 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 RGL1Q9NZL6 768 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 SLC12A6Q9UHW9 1150 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 IKBKGQ9Y6K9 419 aa19.31■□□□□ 0.68
LTBP3-210ENST00000528516 CTCFP49711 727 aaPredicted RBP19.3■□□□□ 0.68
LTBP3-210ENST00000528516 ZNF365Q70YC5 407 aa19.3■□□□□ 0.68
LTBP3-210ENST00000528516 MIER3Q7Z3K6 550 aa19.3■□□□□ 0.68
LTBP3-210ENST00000528516 USP54Q70EL1 1684 aa19.3■□□□□ 0.68
LTBP3-210ENST00000528516 GHRP10912 638 aa19.3■□□□□ 0.68
LTBP3-210ENST00000528516 TAL1P17542 331 aaPredicted RBP19.3■□□□□ 0.68
LTBP3-210ENST00000528516 MAB21L3Q8N8X9 362 aa19.3■□□□□ 0.68
LTBP3-210ENST00000528516 DUSP9Q99956 384 aaKnown RBP19.3■□□□□ 0.68
LTBP3-210ENST00000528516 ATP2A2P16615 1042 aaKnown RBP19.3■□□□□ 0.68
LTBP3-210ENST00000528516 C12orf60Q5U649 245 aa19.3■□□□□ 0.68
LTBP3-210ENST00000528516 SFR1Q86XK3 245 aa19.3■□□□□ 0.68
LTBP3-210ENST00000528516 FAM186BQ8IYM0 893 aa19.3■□□□□ 0.68
LTBP3-210ENST00000528516 TBK1Q9UHD2 729 aa19.3■□□□□ 0.68
LTBP3-210ENST00000528516 IRF6O14896 467 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 UBOX5O94941 541 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 POLE2P56282 527 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 LRRC14Q15048 493 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 LACTB2Q53H82 288 aaPredicted RBP19.29■□□□□ 0.68
LTBP3-210ENST00000528516 AGBL2Q5U5Z8 902 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 OTUD6AQ7L8S5 288 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 JDP2Q8WYK2 163 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 ADAM33Q9BZ11 813 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 ABCF3Q9NUQ8 709 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 BARHL2Q9NY43 387 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 PGRMC1O00264 195 aaKnown RBP19.29■□□□□ 0.68
LTBP3-210ENST00000528516 PCP11498 1178 aaKnown RBP19.29■□□□□ 0.68
LTBP3-210ENST00000528516 ALDH5A1P51649 535 aaPredicted RBP19.29■□□□□ 0.68
LTBP3-210ENST00000528516 GRAPQ13588 217 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 FAM83BQ5T0W9 1011 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 GRAPLQ8TC17 118 aaPredicted RBP19.29■□□□□ 0.68
LTBP3-210ENST00000528516 CELF4Q9BZC1 486 aaKnown RBP19.29■□□□□ 0.68
LTBP3-210ENST00000528516 TTYH3Q9C0H2 523 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 GRID2IPA4D2P6 1211 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 TRIM49P0CI25 452 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 TRIM49CP0CI26 452 aa19.29■□□□□ 0.68
LTBP3-210ENST00000528516 NQO1P15559 274 aaKnown RBP19.29■□□□□ 0.68
LTBP3-210ENST00000528516 SSTR3P32745 418 aaPredicted RBP19.29■□□□□ 0.68
LTBP3-210ENST00000528516 FLT3P36888 993 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms