RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 LAG3P18627 525 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 ITIH3Q06033 890 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 NFX1Q12986 1120 aaKnown RBP11.99□□□□□ -0.49
CPSF1-203ENST00000527916 KCNC3Q14003 757 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 ODR4Q5SWX8 454 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 PLPP4Q5VZY2 271 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 HEATR3Q7Z4Q2 680 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 RAB11FIP4Q86YS3 637 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 NME8Q8N427 588 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 COLGALT1Q8NBJ5 622 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 TCEANC2Q96MN5 208 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 TCF25Q9BQ70 676 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 AGXT2Q9BYV1 514 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 CELF4Q9BZC1 486 aaKnown RBP11.99□□□□□ -0.49
CPSF1-203ENST00000527916 RIC8AQ9NPQ8 531 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 C1orf112Q9NSG2 853 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 TELO2Q9Y4R8 837 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 SNX14Q9Y5W7 946 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 UBIAD1Q9Y5Z9 338 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 V9GY48 417 aaPredicted RBP11.99□□□□□ -0.49
CPSF1-203ENST00000527916 CNTNAP5Q8WYK1 1306 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 LOXHD1Q8IVV2 1947 aa11.99□□□□□ -0.49
CPSF1-203ENST00000527916 CEP250Q9BV73 2442 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 KDM3AQ9Y4C1 1321 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 GSTTP1A0A1W2PQM5 241 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 INSRRP14616 1297 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 KCNA2P16389 499 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 ITGB5P18084 799 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 PSMA5P28066 241 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 MTHFRP42898 656 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 KRT76Q01546 638 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 PLCB3Q01970 1234 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 KRT17Q04695 432 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 TMEM62Q0P6H9 643 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 WWC2Q6AWC2 1192 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 BLOC1S2Q6QNY1 142 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 SLC24A5Q71RS6 500 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 PLCD3Q8N3E9 789 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 MRPS27Q92552 414 aaKnown RBP11.98□□□□□ -0.49
CPSF1-203ENST00000527916 ADAM7Q9H2U9 754 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 TMX1Q9H3N1 280 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 AZI2Q9H6S1 392 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 JADE2Q9NQC1 790 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 TYW1Q9NV66 732 aaKnown RBP11.98□□□□□ -0.49
CPSF1-203ENST00000527916 BARHL2Q9NY43 387 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 PCDHA2Q9Y5H9 948 aa11.98□□□□□ -0.49
CPSF1-203ENST00000527916 FNDC1Q4ZHG4 1894 aaPredicted RBP11.97□□□□□ -0.49
CPSF1-203ENST00000527916 NID2Q14112 1375 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 GOLGA8AA7E2F4 631 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 GOLGA8BA8MQT2 603 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 C2CD4DB7Z1M9 353 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 ATP9AO75110 1047 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 CDC27P30260 824 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 PPM1AP35813 382 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 NAPAP54920 295 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 EVCP57679 992 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 FGD1P98174 961 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 APOBRQ0VD83 1088 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 MTMR1Q13613 665 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 BMS1Q14692 1282 aaKnown RBP11.97□□□□□ -0.49
CPSF1-203ENST00000527916 UBE2SQ16763 222 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 TMEM266Q2M3C6 531 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 ERICH6BQ5W0A0 696 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 TYW1BQ6NUM6 668 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 Q6ZUG5 572 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 DGLUCYQ7Z3D6 616 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 TMC7Q7Z402 723 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 ZDHHC14Q8IZN3 488 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 TDRD5Q8NAT2 981 aaKnown RBP11.97□□□□□ -0.49
CPSF1-203ENST00000527916 FLCNQ8NFG4 579 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 KCNG4Q8TDN1 519 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 JAKMIP1Q96N16 626 aaKnown RBP11.97□□□□□ -0.49
CPSF1-203ENST00000527916 ADAM2Q99965 735 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 SEMA4AQ9H3S1 761 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 POMKQ9H5K3 350 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 ATP6V0A4Q9HBG4 840 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 RGS18Q9NS28 235 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 DNAH14Q0VDD8 3507 aa11.97□□□□□ -0.49
CPSF1-203ENST00000527916 ACACBO00763 2458 aa11.96□□□□□ -0.49
CPSF1-203ENST00000527916 SMIM35A0A1B0GVV1 85 aa11.96□□□□□ -0.49
CPSF1-203ENST00000527916 SMCO2A6NFE2 343 aa11.96□□□□□ -0.49
CPSF1-203ENST00000527916 RPS6KA5O75582 802 aa11.96□□□□□ -0.49
CPSF1-203ENST00000527916 NEFLP07196 543 aa11.96□□□□□ -0.49
CPSF1-203ENST00000527916 RPS6KB1P23443 525 aa11.96□□□□□ -0.49
CPSF1-203ENST00000527916 ADD1P35611 737 aaKnown RBP11.96□□□□□ -0.49
CPSF1-203ENST00000527916 CLK2P49760 499 aaKnown RBP11.96□□□□□ -0.49
CPSF1-203ENST00000527916 METAP2P50579 478 aaKnown RBP eCLIP11.96□□□□□ -0.496e-7■■■□□ 16.3
CPSF1-203ENST00000527916 ADCY7P51828 1080 aa11.96□□□□□ -0.49
CPSF1-203ENST00000527916 AP3B2Q13367 1082 aa11.96□□□□□ -0.49
CPSF1-203ENST00000527916 PFKFB3Q16875 520 aaPredicted RBP11.96□□□□□ -0.49
CPSF1-203ENST00000527916 FAM102BQ5T8I3 360 aa11.96□□□□□ -0.49
CPSF1-203ENST00000527916 ZBTB10Q96DT7 871 aa11.96□□□□□ -0.49
CPSF1-203ENST00000527916 MXRA8Q9BRK3 442 aa11.96□□□□□ -0.49
CPSF1-203ENST00000527916 LIMD1Q9UGP4 676 aa11.96□□□□□ -0.49
CPSF1-203ENST00000527916 GINS2Q9Y248 185 aa11.96□□□□□ -0.49
CPSF1-203ENST00000527916 CACNA1GO43497 2377 aa11.95□□□□□ -0.5
CPSF1-203ENST00000527916 ESYT2A0FGR8 921 aa11.95□□□□□ -0.5
CPSF1-203ENST00000527916 HIDE1A8MVS5 230 aa11.95□□□□□ -0.5
CPSF1-203ENST00000527916 GPR182O15218 404 aa11.95□□□□□ -0.5
CPSF1-203ENST00000527916 HOXA2O43364 376 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms