RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 DNAJC17Q9NVM6 304 aaKnown RBP13.5□□□□□ -0.25
TSKU-203ENST00000527881 ARPP21Q9UBL0 812 aaPredicted RBP13.5□□□□□ -0.25
TSKU-203ENST00000527881 LRRC42Q9Y546 428 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 USH1CQ9Y6N9 552 aa13.5□□□□□ -0.25
TSKU-203ENST00000527881 MYMKA6NI61 221 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 TMEM110-MUSTN1A8MSY1 372 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 SKIP12755 728 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 SPTY2D1Q68D10 685 aaPredicted RBP13.49□□□□□ -0.25
TSKU-203ENST00000527881 JAMLQ86YT9 394 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 MYH7P12883 1935 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 LMO7Q8WWI1 1683 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 ATRNO75882 1429 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 hCG_2014768A0A024R1R8 64 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 O00370 1275 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 NOL4O94818 638 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 TPBGLP0DKB5 382 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 BRAFP15056 766 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 PLCG2P16885 1265 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 DIXDC1Q155Q3 683 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 ZNF571Q7Z3V5 609 aaPredicted RBP13.49□□□□□ -0.25
TSKU-203ENST00000527881 GUF1Q8N442 669 aaKnown RBP13.49□□□□□ -0.25
TSKU-203ENST00000527881 SUPT20HQ8NEM7 779 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 METTL5Q9NRN9 209 aaKnown RBP13.49□□□□□ -0.25
TSKU-203ENST00000527881 CTTNBP2NLQ9P2B4 639 aa13.49□□□□□ -0.25
TSKU-203ENST00000527881 GH1P01241 217 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 EPHB2P29323 1055 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 LBRQ14739 615 aaKnown RBP13.48□□□□□ -0.25
TSKU-203ENST00000527881 LLGL1Q15334 1064 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
TSKU-203ENST00000527881 ATP8B4Q8TF62 1192 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 SYN2Q92777 582 aaPredicted RBP13.48□□□□□ -0.25
TSKU-203ENST00000527881 PCMTD2Q9NV79 361 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 ARMCX3Q9UH62 379 aaPredicted RBP13.48□□□□□ -0.25
TSKU-203ENST00000527881 NAGPAQ9UK23 515 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 RPS6KL1Q9Y6S9 549 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 A0A1W2PRG0 241 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 PEX11AO75192 247 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 BCAMP50895 628 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 AUHQ13825 339 aaKnown RBP13.48□□□□□ -0.25
TSKU-203ENST00000527881 DCAF17Q5H9S7 520 aaPredicted RBP13.48□□□□□ -0.25
TSKU-203ENST00000527881 EXOC3L1Q86VI1 746 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 PPFIBP2Q8ND30 876 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 FAM13CQ8NE31 585 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 ZFAND2BQ8WV99 257 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 LRRC37BQ96QE4 947 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 TRMT112Q9UI30 125 aaKnown RBP13.48□□□□□ -0.25
TSKU-203ENST00000527881 RGPD2P0DJD1 1756 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 CACNA2D1P54289 1103 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 PLS1Q14651 629 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 UNC13DQ70J99 1090 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 AGGF1Q8N302 714 aaeCLIP13.48□□□□□ -0.25
TSKU-203ENST00000527881 TBC1D16Q8TBP0 767 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 STOML1Q9UBI4 398 aa13.48□□□□□ -0.25
TSKU-203ENST00000527881 RTCBQ9Y3I0 505 aaKnown RBP13.48□□□□□ -0.25
TSKU-203ENST00000527881 UBTFL6P0CB48 400 aaPredicted RBP13.47□□□□□ -0.25
TSKU-203ENST00000527881 TNIP1Q15025 636 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 LRRC55Q6ZSA7 311 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 SEPT14Q6ZU15 432 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 CCDC105Q8IYK2 499 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 LARP4BQ92615 738 aaKnown RBP13.47□□□□□ -0.25
TSKU-203ENST00000527881 UBE2OQ9C0C9 1292 aaKnown RBP13.47□□□□□ -0.25
TSKU-203ENST00000527881 MYLK2Q9H1R3 596 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 INTUQ9ULD6 942 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 USP17L12C9JPN9 530 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 USP17L21D6R901 530 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 ATP9AO75110 1047 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 CCNG1P51959 295 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 CALCOCO2Q13137 446 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 ASRGL1Q7L266 308 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 APLFQ8IW19 511 aaPredicted RBP13.47□□□□□ -0.25
TSKU-203ENST00000527881 LRRC57Q8N9N7 239 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 MARCH10Q8NA82 808 aaPredicted RBP13.47□□□□□ -0.25
TSKU-203ENST00000527881 DTX3LQ8TDB6 740 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 C18orf8Q96DM3 657 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 AK8Q96MA6 479 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.47□□□□□ -0.25
TSKU-203ENST00000527881 TMOD4Q9NZQ9 345 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 TBX22Q9Y458 520 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 MYH1P12882 1939 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 ABLIM1O14639 778 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 CYP27B1O15528 508 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 WFS1O76024 890 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 GNAZP19086 355 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 FAM69CQ0P6D2 419 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 C10orf76Q5T2E6 689 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 ECHDC2Q86YB7 292 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 CCNJLQ8IV13 435 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 SRRM1Q8IYB3 904 aaKnown RBP13.47□□□□□ -0.25
TSKU-203ENST00000527881 RBBP8NLQ8NC74 664 aaPredicted RBP13.47□□□□□ -0.25
TSKU-203ENST00000527881 TMEM165Q9HC07 324 aa13.47□□□□□ -0.25
TSKU-203ENST00000527881 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.47□□□□□ -0.25
TSKU-203ENST00000527881 SUCLA2Q9P2R7 463 aaPredicted RBP13.47□□□□□ -0.25
TSKU-203ENST00000527881 LTN1O94822 1766 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 IRS4O14654 1257 aaPredicted RBP13.46□□□□□ -0.25
TSKU-203ENST00000527881 KRT18P05783 430 aaKnown RBP13.46□□□□□ -0.25
TSKU-203ENST00000527881 ATP5DP30049 168 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 NAPAP54920 295 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 PTENP60484 403 aa13.46□□□□□ -0.25
TSKU-203ENST00000527881 DYNLL1P63167 89 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms