RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 ESYT1Q9BSJ8 1104 aa11.3□□□□□ -0.6
CAPN1-210ENST00000527699 CELF4Q9BZC1 486 aaKnown RBP11.3□□□□□ -0.6
CAPN1-210ENST00000527699 TMX1Q9H3N1 280 aa11.3□□□□□ -0.6
CAPN1-210ENST00000527699 RC3H2Q9HBD1 1191 aaKnown RBP11.3□□□□□ -0.6
CAPN1-210ENST00000527699 V9GY48 417 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-210ENST00000527699 RRN3P2A6NIE6 340 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 TBKBP1A7MCY6 615 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 MMP1P03956 469 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 CALM1P0DP23 149 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 CALM2P0DP24 149 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 CALM3P0DP25 149 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 SCG2P13521 617 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 KLRC1P26715 233 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 ADCY7P51828 1080 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 KRT76Q01546 638 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 APOBRQ0VD83 1088 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 FAM102BQ5T8I3 360 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 SYNE3Q6ZMZ3 975 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 NPAS4Q8IUM7 802 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 UBALD2Q8IYN6 164 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 TMTC2Q8N394 836 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 CLP1Q92989 425 aaKnown RBP11.29□□□□□ -0.6
CAPN1-210ENST00000527699 ANO3Q9BYT9 981 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 LMAN2LQ9H0V9 348 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 AGO4Q9HCK5 861 aaKnown RBP11.29□□□□□ -0.6
CAPN1-210ENST00000527699 CLEC1BQ9P126 229 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 BRPF3Q9ULD4 1205 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 NOC2LQ9Y3T9 749 aaKnown RBP11.29□□□□□ -0.6
CAPN1-210ENST00000527699 RWDD3Q9Y3V2 267 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
CAPN1-210ENST00000527699 UNC79Q9P2D8 2635 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 SMCO2A6NFE2 343 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 BRD1O95696 1058 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 CCNE2O96020 404 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 STAG3L1P0CL83 205 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 CPA1P15085 419 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 SMARCA1P28370 1054 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 COASYQ13057 564 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 NECTIN1Q15223 517 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 SWSAP1Q6NVH7 229 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 LLGL2Q6P1M3 1020 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 CKAP2LQ8IYA6 745 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 CCDC105Q8IYK2 499 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 CMTR2Q8IYT2 770 aaKnown RBP11.28□□□□□ -0.6
CAPN1-210ENST00000527699 DTWD2Q8NBA8 298 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 TMEM40Q8WWA1 233 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 RIN2Q8WYP3 895 aaPredicted RBP11.28□□□□□ -0.6
CAPN1-210ENST00000527699 ADAM2Q99965 735 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 NCDNQ9UBB6 729 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 SORCS3Q9UPU3 1222 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 PCDHB7Q9Y5E2 793 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 PCDHA2Q9Y5H9 948 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 MAST4O15021 2626 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 KAT6AQ92794 2004 aa11.28□□□□□ -0.6
CAPN1-210ENST00000527699 DENND3A2RUS2 1198 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 GOLGA8AA7E2F4 631 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 GOLGA8BA8MQT2 603 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 RPS6KA5O75582 802 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 VTNP04004 478 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 FGFR1P11362 822 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 CDC27P30260 824 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 PBX3P40426 434 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 LIFRP42702 1097 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 RTN1Q16799 776 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 KIZQ2M2Z5 673 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 ADCK5Q3MIX3 580 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 PPM1JQ5JR12 505 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 PDXDC2PQ6P474 469 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 ZC3H14Q6PJT7 736 aaKnown RBP11.27□□□□□ -0.61
CAPN1-210ENST00000527699 PLA2G4DQ86XP0 818 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 OSMRQ99650 979 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 RTKNQ9BST9 563 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 SMOC2Q9H3U7 446 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 TLE6Q9H808 572 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 ERVK-5Q9HDB9 667 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 RIC8AQ9NPQ8 531 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 KIAA1671Q9BY89 1806 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 IGSF9BQ9UPX0 1349 aa11.27□□□□□ -0.61
CAPN1-210ENST00000527699 GCN1Q92616 2671 aaKnown RBP11.26□□□□□ -0.61
CAPN1-210ENST00000527699 KLF18A0A0U1RQI7 1052 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 SMIM35A0A1B0GVV1 85 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 GLP2RO95838 553 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 ATF7P17544 494 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-210ENST00000527699 FGFR4P22455 802 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 CA8P35219 290 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 ERVFC1P60507 584 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 CEP55Q53EZ4 464 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 PLPP4Q5VZY2 271 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 APOA5Q6Q788 366 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 PLPPR4Q7Z2D5 763 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 CCDC60Q8IWA6 550 aaPredicted RBP11.26□□□□□ -0.61
CAPN1-210ENST00000527699 THNSL1Q8IYQ7 743 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 KIAA0319LQ8IZA0 1049 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 METTL13Q8N6R0 699 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 RNF169Q8NCN4 708 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 NEK1Q96PY6 1258 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 PLVAPQ9BX97 442 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 FTHL17Q9BXU8 183 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 ZNF302Q9NR11 478 aa11.26□□□□□ -0.61
CAPN1-210ENST00000527699 TYW1Q9NV66 732 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms