RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 SEMA6BQ9H3T3 888 aa14.97□□□□□ -0.01
CAPN1-209ENST00000527469 CYP26B1Q9NR63 512 aa14.97□□□□□ -0.01
CAPN1-209ENST00000527469 PPME1Q9Y570 386 aa14.97□□□□□ -0.01
CAPN1-209ENST00000527469 SQORQ9Y6N5 450 aa14.97□□□□□ -0.01
CAPN1-209ENST00000527469 KDM3AQ9Y4C1 1321 aa14.96□□□□□ -0.01
CAPN1-209ENST00000527469 LAD1O00515 517 aa14.96□□□□□ -0.01
CAPN1-209ENST00000527469 UPP2O95045 317 aa14.96□□□□□ -0.01
CAPN1-209ENST00000527469 SLC34A2O95436 690 aa14.96□□□□□ -0.01
CAPN1-209ENST00000527469 CRYBB1P53674 252 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-209ENST00000527469 NLRP11P59045 1033 aaKnown RBP14.96□□□□□ -0.01
CAPN1-209ENST00000527469 CDC42EP1Q00587 391 aa14.96□□□□□ -0.01
CAPN1-209ENST00000527469 NFX1Q12986 1120 aaKnown RBP14.96□□□□□ -0.01
CAPN1-209ENST00000527469 PTGDRQ13258 359 aa14.96□□□□□ -0.01
CAPN1-209ENST00000527469 TARBP2Q15633 366 aaKnown RBP14.96□□□□□ -0.01
CAPN1-209ENST00000527469 TCTN1Q2MV58 587 aa14.96□□□□□ -0.01
CAPN1-209ENST00000527469 OSMRQ99650 979 aa14.96□□□□□ -0.01
CAPN1-209ENST00000527469 ZNF576Q9H609 170 aa14.96□□□□□ -0.01
CAPN1-209ENST00000527469 PADI3Q9ULW8 664 aa14.96□□□□□ -0.01
CAPN1-209ENST00000527469 PCDHB6Q9Y5E3 794 aa14.96□□□□□ -0.01
CAPN1-209ENST00000527469 WDR81Q562E7 1941 aa14.96□□□□□ -0.02
CAPN1-209ENST00000527469 DENND3A2RUS2 1198 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 GPR182O15218 404 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 MAFO75444 373 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-209ENST00000527469 SLITRK3O94933 977 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 CA3P07451 260 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 MYOGP15173 224 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 RFC5P40937 340 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 TOB1P50616 345 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-209ENST00000527469 NPEPPSP55786 919 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 HAUS3Q68CZ6 603 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.95□□□□□ -0.02
CAPN1-209ENST00000527469 BRAPQ7Z569 592 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 TMCO2Q7Z6W1 182 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-209ENST00000527469 SNX21Q969T3 373 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 HSD17B14Q9BPX1 270 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 OSBPL7Q9BZF2 842 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 AGO3Q9H9G7 860 aaKnown RBP14.95□□□□□ -0.02
CAPN1-209ENST00000527469 MTMR10Q9NXD2 777 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 SUCLA2Q9P2R7 463 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-209ENST00000527469 LRWD1Q9UFC0 647 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 YBX2Q9Y2T7 364 aaKnown RBP14.95□□□□□ -0.02
CAPN1-209ENST00000527469 STK24Q9Y6E0 443 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 EVPLQ92817 2033 aa14.95□□□□□ -0.02
CAPN1-209ENST00000527469 STBD1O95210 358 aa14.94□□□□□ -0.02
CAPN1-209ENST00000527469 GJB5O95377 273 aa14.94□□□□□ -0.02
CAPN1-209ENST00000527469 IBSPP21815 317 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-209ENST00000527469 DTHD1Q6ZMT9 781 aa14.94□□□□□ -0.02
CAPN1-209ENST00000527469 FERMT3Q86UX7 667 aa14.94□□□□□ -0.02
CAPN1-209ENST00000527469 RHPN2Q8IUC4 686 aa14.94□□□□□ -0.02
CAPN1-209ENST00000527469 YME1L1Q96TA2 773 aa14.94□□□□□ -0.02
CAPN1-209ENST00000527469 RAD9AQ99638 391 aa14.94□□□□□ -0.02
CAPN1-209ENST00000527469 GCOM2Q9BZD3 368 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-209ENST00000527469 TTYH1Q9H313 450 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-209ENST00000527469 TUFT1Q9NNX1 390 aa14.94□□□□□ -0.02
CAPN1-209ENST00000527469 BMP2KQ9NSY1 1161 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-209ENST00000527469 ANKEF1Q9NU02 776 aa14.94□□□□□ -0.02
CAPN1-209ENST00000527469 WRAP73Q9P2S5 460 aaPredicted RBP14.94□□□□□ -0.02
CAPN1-209ENST00000527469 NOC2LQ9Y3T9 749 aaKnown RBP14.94□□□□□ -0.02
CAPN1-209ENST00000527469 GAS2O43903 313 aaKnown RBP14.93□□□□□ -0.02
CAPN1-209ENST00000527469 GPR32O75388 356 aa14.93□□□□□ -0.02
CAPN1-209ENST00000527469 LYPLA2O95372 231 aa14.93□□□□□ -0.02
CAPN1-209ENST00000527469 CCT6AP40227 531 aaKnown RBP14.93□□□□□ -0.02
CAPN1-209ENST00000527469 FXR2P51116 673 aaKnown RBP eCLIP14.93□□□□□ -0.02
CAPN1-209ENST00000527469 GPC3P51654 580 aa14.93□□□□□ -0.02
CAPN1-209ENST00000527469 EMC2Q15006 297 aa14.93□□□□□ -0.02
CAPN1-209ENST00000527469 FAM43BQ6ZT52 329 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-209ENST00000527469 TCP11Q8WWU5 503 aa14.93□□□□□ -0.02
CAPN1-209ENST00000527469 PSPC1Q8WXF1 523 aaKnown RBP14.93□□□□□ -0.02
CAPN1-209ENST00000527469 ZNF668Q96K58 619 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-209ENST00000527469 NLRP4Q96MN2 994 aa14.93□□□□□ -0.02
CAPN1-209ENST00000527469 NACC1Q96RE7 527 aa14.93□□□□□ -0.02
CAPN1-209ENST00000527469 GAS2L1Q99501 681 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-209ENST00000527469 POLR3CQ9BUI4 534 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-209ENST00000527469 CDHR5Q9HBB8 845 aa14.93□□□□□ -0.02
CAPN1-209ENST00000527469 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.93□□□□□ -0.02
CAPN1-209ENST00000527469 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
CAPN1-209ENST00000527469 LRFN2Q9ULH4 789 aa14.93□□□□□ -0.02
CAPN1-209ENST00000527469 ST3GAL5Q9UNP4 418 aa14.93□□□□□ -0.02
CAPN1-209ENST00000527469 INSL6Q9Y581 213 aa14.93□□□□□ -0.02
CAPN1-209ENST00000527469 ENPP3O14638 875 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 BMP15O95972 392 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 FOSL2P15408 326 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 SYT1P21579 422 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 EIF4BP23588 611 aaKnown RBP14.92□□□□□ -0.02
CAPN1-209ENST00000527469 PRPHP41219 470 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 PDIA5Q14554 519 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 KRT79Q5XKE5 535 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 CATSPER3Q86XQ3 398 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 LINC01465Q8N7H1 131 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 SNX29Q8TEQ0 813 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 PIGOQ8TEQ8 1089 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 TOP1MTQ969P6 601 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 CDX2Q99626 313 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-209ENST00000527469 MTRQ99707 1265 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 INO80BQ9C086 356 aaPredicted RBP14.92□□□□□ -0.02
CAPN1-209ENST00000527469 ADAMTS10Q9H324 1103 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 ATP6V0A4Q9HBG4 840 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 MICAL3Q7RTP6 2002 aa14.92□□□□□ -0.02
CAPN1-209ENST00000527469 IGKV6-21A0A0C4DH24 114 aa14.91□□□□□ -0.02
CAPN1-209ENST00000527469 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms