RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 KRT222Q8N1A0 295 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 FAM133AQ8N9E0 248 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 GTF3C2Q8WUA4 911 aaPredicted RBP17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 TTYH3Q9C0H2 523 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 MMRN2Q9H8L6 949 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 ZNHIT6Q9NWK9 470 aaKnown RBP17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 ARMCX3Q9UH62 379 aaPredicted RBP17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 RASSF10A6NK89 507 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 PLS3P13797 630 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 EDNRBP24530 442 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 FKBP1BP68106 108 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 FSTL1Q12841 308 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 Q3C1V9 767 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 RAD9BQ6WBX8 426 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 SYT10Q6XYQ8 523 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 REXO1L1PQ8IX06 675 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 GOLGA5Q8TBA6 731 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 MROH8Q9H579 483 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 METTL14Q9HCE5 456 aaKnown RBP17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 SIK3Q9Y2K2 1263 aa17.81■□□□□ 0.44
SNRNP35-204ENST00000527158 TMEM150BA6NC51 233 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 K7ENM7 598 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 SLC16A3O15427 465 aaKnown RBP17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 TGFB1I1O43294 461 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 EPB41P11171 864 aaKnown RBP17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 SP2Q02086 613 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 PPP2R3AQ06190 1150 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 MTF1Q14872 753 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 NFIL3Q16649 462 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 PLA2G4FQ68DD2 849 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 ABHD15Q6UXT9 468 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 ANO5Q75V66 913 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 CYFIP1Q7L576 1253 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 MMP19Q99542 508 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 SH2D3AQ9BRG2 576 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 GBP3Q9H0R5 595 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 AGPAT5Q9NUQ2 364 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 CLIC2O15247 247 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 CETPP11597 493 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 NPEPPSP55786 919 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 SYCP3Q8IZU3 236 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 SLC17A8Q8NDX2 589 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 CEP170P1Q96L14 293 aa17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 FAM207AQ9NSI2 230 aaPredicted RBP17.8■□□□□ 0.44
SNRNP35-204ENST00000527158 SORBS3O60504 671 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 SUPT20HL2P0C7V6 817 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 GTF2A2P52657 109 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 WDR78Q5VTH9 848 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 NEK11Q8NG66 645 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 DESI2Q9BSY9 194 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 STRA6Q9BX79 667 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 TMEM206Q9H813 350 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 PRDM10Q9NQV6 1147 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 ARGLU1Q9NWB6 273 aaPredicted RBP17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 ZMYM2Q9UBW7 1377 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 ZNF862O60290 1169 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 AKAP3O75969 853 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 TGFB3P10600 412 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 XRCC5P13010 732 aaKnown RBP17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 ERVK-9P63128 1117 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 ERVK-24P63145 666 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 ELF2Q15723 593 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 FAM102BQ5T8I3 360 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 KSR1Q8IVT5 923 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 SMCR8Q8TEV9 937 aaPredicted RBP17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 RRAGCQ9HB90 399 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 GBA2Q9HCG7 927 aaPredicted RBP17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 FAM53CQ9NYF3 392 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 ADGRG1Q9Y653 693 aa17.79■□□□□ 0.44
SNRNP35-204ENST00000527158 PPP1R37O75864 691 aa17.78■□□□□ 0.44
SNRNP35-204ENST00000527158 PGK2P07205 417 aa17.78■□□□□ 0.44
SNRNP35-204ENST00000527158 KCNH2Q12809 1159 aa17.78■□□□□ 0.44
SNRNP35-204ENST00000527158 NEDD9Q14511 834 aa17.78■□□□□ 0.44
SNRNP35-204ENST00000527158 CCDC60Q8IWA6 550 aaPredicted RBP17.78■□□□□ 0.44
SNRNP35-204ENST00000527158 C2orf69Q8N8R5 385 aa17.78■□□□□ 0.44
SNRNP35-204ENST00000527158 SHCBP1Q8NEM2 672 aa17.78■□□□□ 0.44
SNRNP35-204ENST00000527158 EDEM3Q9BZQ6 932 aa17.78■□□□□ 0.44
SNRNP35-204ENST00000527158 DNAI1Q9UI46 699 aa17.78■□□□□ 0.44
SNRNP35-204ENST00000527158 SLC45A1Q9Y2W3 748 aa17.78■□□□□ 0.44
SNRNP35-204ENST00000527158 LCTP09848 1927 aa17.78■□□□□ 0.44
SNRNP35-204ENST00000527158 KIAA1217Q5T5P2 1943 aa17.77■□□□□ 0.44
SNRNP35-204ENST00000527158 CYP2C8P10632 490 aa17.77■□□□□ 0.44
SNRNP35-204ENST00000527158 H2AFXP16104 143 aaPredicted RBP17.77■□□□□ 0.44
SNRNP35-204ENST00000527158 PSMC2P35998 433 aaKnown RBP17.77■□□□□ 0.44
SNRNP35-204ENST00000527158 SMTNP53814 917 aa17.77■□□□□ 0.44
SNRNP35-204ENST00000527158 BMS1Q14692 1282 aaKnown RBP17.77■□□□□ 0.44
SNRNP35-204ENST00000527158 NAA30Q147X3 362 aaPredicted RBP17.77■□□□□ 0.44
SNRNP35-204ENST00000527158 MEA1Q16626 185 aa17.77■□□□□ 0.44
SNRNP35-204ENST00000527158 ACCSQ96QU6 501 aa17.77■□□□□ 0.44
SNRNP35-204ENST00000527158 AGPAT3Q9NRZ7 376 aa17.77■□□□□ 0.44
SNRNP35-204ENST00000527158 ATG7O95352 703 aa17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 UBA1P22314 1058 aaKnown RBP17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 PEX3P56589 373 aa17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 CCNA1P78396 465 aa17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 PRKCEQ02156 737 aa17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 XKR3Q5GH77 459 aa17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 CCDC155Q8N6L0 562 aa17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 GPRC5AQ8NFJ5 357 aa17.77■□□□□ 0.43
SNRNP35-204ENST00000527158 KIFAP3Q92845 792 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms