RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 EFCAB12Q6NXP0 572 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 LRRC71Q8N4P6 559 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 KCTD17Q8N5Z5 321 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 SYT2Q8N9I0 419 aaPredicted RBP12.02□□□□□ -0.49
NEDD8-205ENST00000527046 ENGASEQ8NFI3 743 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 CEP170P1Q96L14 293 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 RUSC1Q9BVN2 902 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 TUBE1Q9UJT0 475 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 STK24Q9Y6E0 443 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 LTBP2Q14767 1821 aa12.02□□□□□ -0.49
NEDD8-205ENST00000527046 SCN5AQ14524 2016 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 MAGEB2O15479 319 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 GPR32O75388 356 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 CKBP12277 381 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 CYP11B2P19099 503 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 CYP2C18P33260 490 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 CLCN3P51790 818 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 SNW1Q13573 536 aaKnown RBP12.01□□□□□ -0.49
NEDD8-205ENST00000527046 MCM6Q14566 821 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 TCTN1Q2MV58 587 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 ZNF618Q5T7W0 954 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 PADI6Q6TGC4 694 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 C16orf59Q7L2K0 433 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 OTUD6AQ7L8S5 288 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 C7orf61Q8IZ16 206 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 DAW1Q8N136 415 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 PDILTQ8N807 584 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 RAD54LQ92698 747 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 HTATIP2Q9BUP3 242 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 ADAMTS10Q9H324 1103 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 GPRC5CQ9NQ84 441 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 TMEM39AQ9NV64 488 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 DNM3Q9UQ16 869 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 MROH7Q68CQ1 1323 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 LOXHD1Q8IVV2 1947 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 TET1Q8NFU7 2136 aa12.01□□□□□ -0.49
NEDD8-205ENST00000527046 NPHP3-ACAD11A0A0J9YXS1 232 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 ACTN4O43707 911 aaKnown RBP12□□□□□ -0.49
NEDD8-205ENST00000527046 TIMP1P01033 207 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 IQCF3P0C7M6 154 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 PLA2G4BP0C869 781 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 GNAT1P11488 350 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 PFKFB1P16118 471 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 NDUFA8P51970 172 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 EPHB4P54760 987 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 TBC1D8BQ0IIM8 1120 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 EMC2Q15006 297 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 ZRSR1Q15695 479 aaKnown RBP12□□□□□ -0.49
NEDD8-205ENST00000527046 LONRF3Q496Y0 759 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 TAF2Q6P1X5 1199 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 KSR1Q8IVT5 923 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 TMEM40Q8WWA1 233 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 BSNDQ8WZ55 320 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 DPF3Q92784 378 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 TMEM143Q96AN5 459 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 DNAJC19Q96DA6 116 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 NT5C3AQ9H0P0 336 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 SUGCTQ9HAC7 445 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 BMP2KQ9NSY1 1161 aaPredicted RBP12□□□□□ -0.49
NEDD8-205ENST00000527046 LMBRD1Q9NUN5 540 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 KBTBD4Q9NVX7 518 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 KCNH3Q9ULD8 1083 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 PPME1Q9Y570 386 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 KDM3AQ9Y4C1 1321 aa12□□□□□ -0.49
NEDD8-205ENST00000527046 MYMKA6NI61 221 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 PITPNM1O00562 1244 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 POLR2DO15514 142 aaKnown RBP11.99□□□□□ -0.49
NEDD8-205ENST00000527046 EVI5O60447 810 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 NBNO60934 754 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 DGAT1O75907 488 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 VTNP04004 478 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 SYN1P17600 705 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 LIG1P18858 919 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 RFC5P40937 340 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 TMEM62Q0P6H9 643 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 GIT2Q14161 759 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 RRAGBQ5VZM2 374 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 FMR1NBQ8N0W7 255 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-205ENST00000527046 NME8Q8N427 588 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 ASAP3Q8TDY4 903 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 STAMQ92783 540 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 CALML4Q96GE6 196 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 PPP1R12CQ9BZL4 782 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 FAM49AQ9H0Q0 323 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-205ENST00000527046 IFT122Q9HBG6 1241 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 SERTAD1Q9UHV2 236 aa11.99□□□□□ -0.49
NEDD8-205ENST00000527046 ZMYND8Q9ULU4 1186 aaPredicted RBP11.99□□□□□ -0.49
NEDD8-205ENST00000527046 SFI1A8K8P3 1242 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 RSPH10B2B2RC85 870 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 TLR3O15455 904 aaKnown RBP11.98□□□□□ -0.49
NEDD8-205ENST00000527046 USO1O60763 962 aaKnown RBP11.98□□□□□ -0.49
NEDD8-205ENST00000527046 PRPF40AO75400 957 aaKnown RBP11.98□□□□□ -0.49
NEDD8-205ENST00000527046 RSPH10BP0C881 870 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 GLRA2P23416 452 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 THPOP40225 353 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 GPC3P51654 580 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 CCL23P55773 120 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 MDM2Q00987 491 aaPredicted RBP11.98□□□□□ -0.49
NEDD8-205ENST00000527046 IER5Q5VY09 327 aa11.98□□□□□ -0.49
NEDD8-205ENST00000527046 MAEAQ7L5Y9 396 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms