RNA–Protein interactions for RNA: ENST00000526825.5

LTBP3-206, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 1,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-206ENST00000526825 ODR4Q5SWX8 454 aa17.04■□□□□ 0.32
LTBP3-206ENST00000526825 FAM228AQ86W67 206 aa17.04■□□□□ 0.32
LTBP3-206ENST00000526825 SMAP1Q8IYB5 467 aaPredicted RBP17.04■□□□□ 0.32
LTBP3-206ENST00000526825 PPP2R3CQ969Q6 453 aa17.04■□□□□ 0.32
LTBP3-206ENST00000526825 ZSWIM6Q9HCJ5 1215 aa17.04■□□□□ 0.32
LTBP3-206ENST00000526825 NID2Q14112 1375 aa17.03■□□□□ 0.32
LTBP3-206ENST00000526825 TBKBP1A7MCY6 615 aa17.03■□□□□ 0.32
LTBP3-206ENST00000526825 PSMA5P28066 241 aa17.03■□□□□ 0.32
LTBP3-206ENST00000526825 GNA11P29992 359 aa17.03■□□□□ 0.32
LTBP3-206ENST00000526825 PDIA3P30101 505 aaKnown RBP17.03■□□□□ 0.32
LTBP3-206ENST00000526825 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
LTBP3-206ENST00000526825 CKAP2LQ8IYA6 745 aa17.03■□□□□ 0.32
LTBP3-206ENST00000526825 REXO1Q8N1G1 1221 aaKnown RBP17.03■□□□□ 0.32
LTBP3-206ENST00000526825 CCDC12Q8WUD4 166 aaPredicted RBP17.03■□□□□ 0.32
LTBP3-206ENST00000526825 LENG9Q96B70 501 aa17.03■□□□□ 0.32
LTBP3-206ENST00000526825 OSMRQ99650 979 aa17.03■□□□□ 0.32
LTBP3-206ENST00000526825 TYW1Q9NV66 732 aaKnown RBP17.03■□□□□ 0.32
LTBP3-206ENST00000526825 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
LTBP3-206ENST00000526825 GABBR1Q9UBS5 961 aa17.03■□□□□ 0.32
LTBP3-206ENST00000526825 PCDHGC5Q9Y5F6 944 aa17.03■□□□□ 0.32
LTBP3-206ENST00000526825 KIAA1671Q9BY89 1806 aa17.03■□□□□ 0.32
LTBP3-206ENST00000526825 MYH9P35579 1960 aaKnown RBP17.02■□□□□ 0.32
LTBP3-206ENST00000526825 FNDC1Q4ZHG4 1894 aaPredicted RBP17.02■□□□□ 0.32
LTBP3-206ENST00000526825 DENND3A2RUS2 1198 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 MAGEB2O15479 319 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 GLP2RO95838 553 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 VTNP04004 478 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 PSAPP07602 524 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 IBSPP21815 317 aaPredicted RBP17.02■□□□□ 0.32
LTBP3-206ENST00000526825 NRIP1P48552 1158 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 NDUFV1P49821 464 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 ERVFC1P60507 584 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 SETQ01105 290 aaPredicted RBP17.02■□□□□ 0.32
LTBP3-206ENST00000526825 UBE3AQ05086 875 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 COASYQ13057 564 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 PRR16Q569H4 304 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 HERC4Q5GLZ8 1057 aaPredicted RBP17.02■□□□□ 0.32
LTBP3-206ENST00000526825 TRMT1LQ7Z2T5 733 aaKnown RBP17.02■□□□□ 0.32
LTBP3-206ENST00000526825 RBM23Q86U06 439 aaKnown RBP17.02■□□□□ 0.32
LTBP3-206ENST00000526825 RNF135Q8IUD6 432 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 LINC01465Q8N7H1 131 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 RASGRP4Q8TDF6 673 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 PPP1R16BQ96T49 567 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 POP1Q99575 1024 aaKnown RBP17.02■□□□□ 0.32
LTBP3-206ENST00000526825 CWH43Q9H720 699 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 ELAC1Q9H777 363 aaKnown RBP17.02■□□□□ 0.32
LTBP3-206ENST00000526825 TMEM161AQ9NX61 479 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 PCDHB12Q9Y5F1 795 aa17.02■□□□□ 0.32
LTBP3-206ENST00000526825 EVCP57679 992 aa17.01■□□□□ 0.31
LTBP3-206ENST00000526825 CSPP1Q1MSJ5 1256 aa17.01■□□□□ 0.31
LTBP3-206ENST00000526825 METTL13Q8N6R0 699 aa17.01■□□□□ 0.31
LTBP3-206ENST00000526825 SMRP1Q8NCR6 262 aa17.01■□□□□ 0.31
LTBP3-206ENST00000526825 ADAMTS10Q9H324 1103 aa17.01■□□□□ 0.31
LTBP3-206ENST00000526825 ATP6V0A4Q9HBG4 840 aa17.01■□□□□ 0.31
LTBP3-206ENST00000526825 AAASQ9NRG9 546 aa17.01■□□□□ 0.31
LTBP3-206ENST00000526825 HCSTQ9UBK5 93 aa17.01■□□□□ 0.31
LTBP3-206ENST00000526825 CEP131Q9UPN4 1083 aa17.01■□□□□ 0.31
LTBP3-206ENST00000526825 TECTAO75443 2155 aa17.01■□□□□ 0.31
LTBP3-206ENST00000526825 MSH4O15457 936 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 ZNF862O60290 1169 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 FGF18O76093 207 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 FGFR1P11362 822 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 IFNAR1P17181 557 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 CLCN3P51790 818 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 NLRP11P59045 1033 aaKnown RBP17■□□□□ 0.31
LTBP3-206ENST00000526825 STK3Q13188 491 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 SPOUT1Q5T280 376 aaKnown RBP17■□□□□ 0.31
LTBP3-206ENST00000526825 EFCAB12Q6NXP0 572 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 MICAL1Q8TDZ2 1067 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 SLC26A6Q9BXS9 759 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 RNF26Q9BY78 433 aaPredicted RBP17■□□□□ 0.31
LTBP3-206ENST00000526825 TLE6Q9H808 572 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 NRBP2Q9NSY0 501 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 RNF19AQ9NV58 838 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 MUTYHQ9UIF7 546 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 CYP46A1Q9Y6A2 500 aa17■□□□□ 0.31
LTBP3-206ENST00000526825 FSCN2O14926 492 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 PER2O15055 1255 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 SEC24BO95487 1268 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 USP11P51784 963 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 AKAP17AQ02040 695 aaKnown RBP16.99■□□□□ 0.31
LTBP3-206ENST00000526825 LRRC55Q6ZSA7 311 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 COLGALT1Q8NBJ5 622 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 BICD2Q8TD16 824 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 FAM167AQ96KS9 214 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 AIFM3Q96NN9 605 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 CASD1Q96PB1 797 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 TMEM117Q9H0C3 514 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 TLR9Q9NR96 1032 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 DISC1Q9NRI5 854 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 VPS54Q9P1Q0 977 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 BARX2Q9UMQ3 279 aaPredicted RBP16.99■□□□□ 0.31
LTBP3-206ENST00000526825 ZNF318Q5VUA4 2279 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 PLXNA4Q9HCM2 1894 aa16.99■□□□□ 0.31
LTBP3-206ENST00000526825 WDR64B1ANS9 1081 aa16.98■□□□□ 0.31
LTBP3-206ENST00000526825 LOC730098B7Z3J9 87 aa16.98■□□□□ 0.31
LTBP3-206ENST00000526825 EPB41L2O43491 1005 aaKnown RBP16.98■□□□□ 0.31
LTBP3-206ENST00000526825 EIF4BP23588 611 aaKnown RBP16.98■□□□□ 0.31
LTBP3-206ENST00000526825 RBM10P98175 930 aaKnown RBP16.98■□□□□ 0.31
LTBP3-206ENST00000526825 PLCB3Q01970 1234 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms