RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 TRPV2Q9Y5S1 764 aa12.51□□□□□ -0.41
SNRNP35-203ENST00000526639 DDIT3P35638 169 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 PPP2R5CQ13362 524 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 SAFBQ15424 915 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 EFCAB12Q6NXP0 572 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 SLC17A8Q8NDX2 589 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 MAFAQ8NHW3 353 aaPredicted RBP12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 TMEM40Q8WWA1 233 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 ARNTL2Q8WYA1 636 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 TOP1MTQ969P6 601 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 ZNF668Q96K58 619 aaPredicted RBP12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 FAM167AQ96KS9 214 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 RAD9AQ99638 391 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 SEPT9Q9UHD8 586 aaPredicted RBP12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 PADI3Q9ULW8 664 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 LOXHD1Q8IVV2 1947 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 EPOPA6NHQ4 379 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 RPLP2P05387 115 aaKnown RBP12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 NFX1Q12986 1120 aaKnown RBP12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 MTERF2Q49AM1 385 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 NCAPH2Q6IBW4 605 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 FBXO18Q8NFZ0 1043 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 RDM1Q8NG50 284 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 OSMRQ99650 979 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 NAP1L4Q99733 375 aaKnown RBP12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 WRAP73Q9P2S5 460 aaPredicted RBP12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 AKT3Q9Y243 479 aa12.5□□□□□ -0.41
SNRNP35-203ENST00000526639 DDX11L8A8MPP1 907 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 ENPP3O14638 875 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 TBX3O15119 743 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 STBD1O95210 358 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 BAG4O95429 457 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 MCM7P33993 719 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 TBC1D8BQ0IIM8 1120 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 CALCRLQ16602 461 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 ANO5Q75V66 913 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 RGL1Q9NZL6 768 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 PCDHA12Q9UN75 941 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 INSL6Q9Y581 213 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 MAGEB2O15479 319 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 NEMFO60524 1076 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 IBSPP21815 317 aaPredicted RBP12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 TXKP42681 527 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 NLRP11P59045 1033 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 PSMC5P62195 406 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 CYP4A11Q02928 519 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 SPIRE1Q08AE8 756 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 PAK2Q13177 524 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 DRP2Q13474 957 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 GNL2Q13823 731 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 CCDC85BQ15834 202 aaPredicted RBP12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 XKR3Q5GH77 459 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 PLA2G4FQ68DD2 849 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 RTN4RL1Q86UN2 441 aaPredicted RBP12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 SLFN12Q8IYM2 578 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 YME1L1Q96TA2 773 aa12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 TTC12Q9H892 705 aaPredicted RBP12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 NOC2LQ9Y3T9 749 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-203ENST00000526639 KDM3AQ9Y4C1 1321 aa12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 LINC01553A4QN01 128 aa12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 ZBTB39O15060 712 aa12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 GPR32O75388 356 aa12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 RPS6KA5O75582 802 aa12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 TMOD1P28289 359 aa12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 QARSP47897 775 aaKnown RBP12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 CTTNQ14247 550 aaKnown RBP12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 TARBP2Q15633 366 aaKnown RBP12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 USP38Q8NB14 1042 aa12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 LINC01599Q8WXQ3 324 aa12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 NIFKQ9BYG3 293 aaKnown RBP12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 SQORQ9Y6N5 450 aa12.48□□□□□ -0.41
SNRNP35-203ENST00000526639 P4HBP07237 508 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 NPEPPSP55786 919 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 HTRA4P83105 476 aaPredicted RBP12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 ZNF174Q15697 407 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 MICALL1Q8N3F8 863 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 LINC01465Q8N7H1 131 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 ZNF579Q8NAF0 562 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 DYDC2Q96IM9 177 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 CEP89Q96ST8 783 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 MAP7D2Q96T17 732 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 LXNQ9BS40 222 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 C17orf80Q9BSJ5 609 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 TMEM60Q9H2L4 133 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 FOXP1Q9H334 677 aaPredicted RBP12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 TMX1Q9H3N1 280 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 BMP2KQ9NSY1 1161 aaPredicted RBP12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 CHMP5Q9NZZ3 219 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 CIZ1Q9ULV3 898 aaPredicted RBP12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 CSDE1O75534 798 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 CRYBB1P53674 252 aaPredicted RBP12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 EPHA7Q15375 998 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 NOSTRINQ8IVI9 506 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 TPH2Q8IWU9 490 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 MTMR9Q96QG7 549 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 ST3GAL5Q9UNP4 418 aa12.47□□□□□ -0.41
SNRNP35-203ENST00000526639 MUC3AQ02505 3323 aa12.46□□□□□ -0.41
SNRNP35-203ENST00000526639 POTEMA6NI47 508 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms