RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 LLPHQ9BRT6 129 aaKnown RBP12.44□□□□□ -0.42
NEDD8-204ENST00000526430 ORC3Q9UBD5 711 aaPredicted RBP12.44□□□□□ -0.42
NEDD8-204ENST00000526430 MRPL11Q9Y3B7 192 aaKnown RBP12.44□□□□□ -0.42
NEDD8-204ENST00000526430 GPR179Q6PRD1 2367 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 C2CD4DB7Z1M9 353 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 CPLX1O14810 134 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 DEXIO95424 95 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 GHRP10912 638 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 SDHBP21912 280 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 SP100P23497 879 aaPredicted RBP12.43□□□□□ -0.42
NEDD8-204ENST00000526430 TECP42680 631 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 CLK2P49760 499 aaKnown RBP12.43□□□□□ -0.42
NEDD8-204ENST00000526430 LPIN1Q14693 890 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 USP17L6PQ6QN14 398 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 NPAS4Q8IUM7 802 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 ZDHHC14Q8IZN3 488 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 CYP2W1Q8TAV3 490 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 SMOC2Q9H3U7 446 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 TSHZ2Q9NRE2 1034 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 VPS54Q9P1Q0 977 aa12.43□□□□□ -0.42
NEDD8-204ENST00000526430 PATJQ8NI35 1801 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 ESYT2A0FGR8 921 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 K7ELQ4 463 aaPredicted RBP12.42□□□□□ -0.42
NEDD8-204ENST00000526430 PIK3CDO00329 1044 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 FSCN2O14926 492 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 PI15O43692 258 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 GGPS1O95749 300 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 LGALS2P05162 132 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 NR3C2P08235 984 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 TGFB3P10600 412 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 NPR3P17342 541 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 HOXA13P31271 388 aaPredicted RBP12.42□□□□□ -0.42
NEDD8-204ENST00000526430 ITIH3Q06033 890 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 MGAT3Q09327 533 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 RSPO4Q2I0M5 234 aaPredicted RBP12.42□□□□□ -0.42
NEDD8-204ENST00000526430 ARHGEF16Q5VV41 709 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 HEATR3Q7Z4Q2 680 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 MCF2L2Q86YR7 1114 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 FLCNQ8NFG4 579 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 MICAL1Q8TDZ2 1067 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 RIC8AQ9NPQ8 531 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 PXMP2Q9NR77 195 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 SETD4Q9NVD3 440 aa12.42□□□□□ -0.42
NEDD8-204ENST00000526430 SEC63Q9UGP8 760 aaKnown RBP12.42□□□□□ -0.42
NEDD8-204ENST00000526430 SMCO2A6NFE2 343 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 hCG_1984214I3L0E3 225 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 CFBP00751 764 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 STAG3L1P0CL83 205 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 EIF2AK2P19525 551 aaKnown RBP12.41□□□□□ -0.42
NEDD8-204ENST00000526430 UBA1P22314 1058 aaKnown RBP12.41□□□□□ -0.42
NEDD8-204ENST00000526430 TPRNQ4KMQ1 711 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 FBXO47Q5MNV8 452 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 TAF2Q6P1X5 1199 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 ZC3H14Q6PJT7 736 aaKnown RBP12.41□□□□□ -0.42
NEDD8-204ENST00000526430 TSHZ1Q6ZSZ6 1077 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 PLCD3Q8N3E9 789 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 SAMD3Q8N6K7 520 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 ZNF713Q8N859 430 aaPredicted RBP12.41□□□□□ -0.42
NEDD8-204ENST00000526430 LMBR1Q8WVP7 490 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 CRYGNQ8WXF5 182 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 LINC01599Q8WXQ3 324 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 PHF20Q9BVI0 1012 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 FTHL17Q9BXU8 183 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 ADAM7Q9H2U9 754 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 POMKQ9H5K3 350 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 PSTPIP2Q9H939 334 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 SH3GLB2Q9NR46 395 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 TMEM260Q9NX78 707 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 MAP3K20Q9NYL2 800 aaKnown RBP12.41□□□□□ -0.42
NEDD8-204ENST00000526430 KCNJ14Q9UNX9 436 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 USTQ9Y2C2 406 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 PCDHB12Q9Y5F1 795 aa12.41□□□□□ -0.42
NEDD8-204ENST00000526430 CDKL5O76039 1030 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 ASGR2P07307 311 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 NAPAP54920 295 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 ERVFC1P60507 584 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 UBE2SQ16763 222 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 KIAA0319Q5VV43 1072 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 CES5AQ6NT32 575 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 CPLX2Q6PUV4 134 aaKnown RBP12.4□□□□□ -0.42
NEDD8-204ENST00000526430 TRIM22Q8IYM9 498 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 TDRD5Q8NAT2 981 aaKnown RBP12.4□□□□□ -0.42
NEDD8-204ENST00000526430 IL31RAQ8NI17 732 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 OXER1Q8TDS5 423 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 TNFRSF25Q93038 417 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 HINFPQ9BQA5 517 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 AAASQ9NRG9 546 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 LZTS1Q9Y250 596 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 SQORQ9Y6N5 450 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 R4GN57 208 aa12.4□□□□□ -0.42
NEDD8-204ENST00000526430 FRMPD4Q14CM0 1322 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 NRCAMQ92823 1304 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 GCOM1H8Y6P7 765 aaPredicted RBP12.39□□□□□ -0.43
NEDD8-204ENST00000526430 FGF18O76093 207 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 POLR2MP0CAP2 368 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 MTHFRP42898 656 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 SP2Q02086 613 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 TRAF1Q13077 416 aa12.39□□□□□ -0.43
NEDD8-204ENST00000526430 PAN2Q504Q3 1202 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms