RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 FAM133AQ8N9E0 248 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 LRRC15Q8TF66 581 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 DCAF4Q8WV16 495 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 TAF4BQ92750 862 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 MMTAG2Q9BU76 263 aaKnown RBP10.73□□□□□ -0.69
USP35-201ENST00000526425 CAPS2Q9BXY5 557 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 MMADHCQ9H3L0 296 aaPredicted RBP10.73□□□□□ -0.69
USP35-201ENST00000526425 DNAJC18Q9H819 358 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 MLXIPQ9HAP2 919 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 UBAP1Q9NZ09 502 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 ARMCX3Q9UH62 379 aaPredicted RBP10.73□□□□□ -0.69
USP35-201ENST00000526425 CCDC151A5D8V7 595 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 LRRC53A6NM62 1247 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 ZBTB39O15060 712 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 MED24O75448 989 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 CLTAP09496 248 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 PAFAH1B1P43034 410 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 TRIM65Q6PJ69 517 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 CCDC121Q6ZUS5 278 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 TAX1BP1Q86VP1 789 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 NSMCE1Q8WV22 266 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 HOOK2Q96ED9 719 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 DYDC2Q96IM9 177 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 NUP58Q9BVL2 599 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 GLIS2Q9BZE0 524 aaPredicted RBP10.73□□□□□ -0.69
USP35-201ENST00000526425 GLT8D2Q9H1C3 349 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 BLOC1S4Q9NUP1 217 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 COL4A3BPQ9Y5P4 624 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 NID2Q14112 1375 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 KLRC4O43908 158 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 TUBB4AP04350 444 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 ASNSP08243 561 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 RAB27AP51159 221 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 TMEM62Q0P6H9 643 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 PDCLQ13371 301 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 ECM1Q16610 540 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 ACCSLQ4AC99 568 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 ODR4Q5SWX8 454 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 PHC3Q8NDX5 983 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 DUSP9Q99956 384 aaKnown RBP10.73□□□□□ -0.69
USP35-201ENST00000526425 CDC23Q9UJX2 597 aa10.73□□□□□ -0.69
USP35-201ENST00000526425 C10orf71Q711Q0 1435 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 WNT10BO00744 389 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 TBX2Q13207 712 aaPredicted RBP10.72□□□□□ -0.69
USP35-201ENST00000526425 SFMBT2Q5VUG0 894 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 SPATA21Q7Z572 469 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 SPATA20Q8TB22 786 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 TCP11Q8WWU5 503 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 AGBL1Q96MI9 1066 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 C7orf25Q9BPX7 421 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 MAGEF1Q9HAY2 307 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 A0A1W2PRG0 241 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 TMEM110-MUSTN1A8MSY1 372 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 EPB41P11171 864 aaKnown RBP10.72□□□□□ -0.69
USP35-201ENST00000526425 HARSP12081 509 aaKnown RBP10.72□□□□□ -0.69
USP35-201ENST00000526425 MXRA7P84157 204 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 ZBED6P86452 979 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 MICALCLQ6ZW33 695 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 SH3BP5LQ7L8J4 393 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 FAM178BQ8IXR5 827 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 SAR1BQ9Y6B6 198 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 CCDC88AQ3V6T2 1871 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 BACH1O14867 736 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 EXOC3O60645 756 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 ACTN1P12814 892 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 KCNA3P22001 575 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 NMT1P30419 496 aaKnown RBP10.72□□□□□ -0.69
USP35-201ENST00000526425 GFPT1Q06210 699 aaPredicted RBP10.72□□□□□ -0.69
USP35-201ENST00000526425 SPDYE2Q495Y8 402 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 SLC9C1Q4G0N8 1177 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 MIER3Q7Z3K6 550 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 GSPT2Q8IYD1 628 aaKnown RBP10.72□□□□□ -0.69
USP35-201ENST00000526425 RABGGTAQ92696 567 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 NAP1L4Q99733 375 aaKnown RBP10.72□□□□□ -0.69
USP35-201ENST00000526425 PAPOLBQ9NRJ5 636 aaKnown RBP10.72□□□□□ -0.69
USP35-201ENST00000526425 SMARCAL1Q9NZC9 954 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 ADAMTS1Q9UHI8 967 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 USH1CQ9Y6N9 552 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 SNED1Q8TER0 1413 aa10.72□□□□□ -0.69
USP35-201ENST00000526425 NKRFO15226 690 aaKnown RBP eCLIP10.71□□□□□ -0.69
USP35-201ENST00000526425 ZNF185O15231 689 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 XRCC5P13010 732 aaKnown RBP10.71□□□□□ -0.69
USP35-201ENST00000526425 PPP1R2P41236 205 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 IRAK1P51617 712 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 ASIC2Q16515 512 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 KCTD19Q17RG1 926 aaPredicted RBP10.71□□□□□ -0.69
USP35-201ENST00000526425 DCAF15Q66K64 600 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 IRF2BP1Q8IU81 584 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 ELOA2Q8IYF1 753 aaPredicted RBP10.71□□□□□ -0.69
USP35-201ENST00000526425 IFT81Q8WYA0 676 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 EPAS1Q99814 870 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 PPP1R12CQ9BZL4 782 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 HAUS2Q9NVX0 235 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 MRPL11Q9Y3B7 192 aaKnown RBP10.71□□□□□ -0.69
USP35-201ENST00000526425 NCK2O43639 380 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 PFDN1O60925 122 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 MYL1P05976 194 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 ABCB4P21439 1286 aa10.71□□□□□ -0.69
USP35-201ENST00000526425 RPS12P25398 132 aaKnown RBP10.71□□□□□ -0.69
USP35-201ENST00000526425 SMARCA1P28370 1054 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms