RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 TCF25Q9BQ70 676 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 S1PR5Q9H228 398 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 CWH43Q9H720 699 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 RIC8AQ9NPQ8 531 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 AAASQ9NRG9 546 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 RGS18Q9NS28 235 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 PUF60Q9UHX1 559 aaKnown RBP7.48□□□□□ -1.21
CD44-221ENST00000526000 AKT3Q9Y243 479 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 SQORQ9Y6N5 450 aa7.48□□□□□ -1.21
CD44-221ENST00000526000 GOLGA8AA7E2F4 631 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 GOLGA8BA8MQT2 603 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 DHX15O43143 795 aaKnown RBP7.47□□□□□ -1.21
CD44-221ENST00000526000 GPR32O75388 356 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 CXCL14O95715 111 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 ASGR2P07307 311 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 CDC27P30260 824 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 LIFRP42702 1097 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 METAP2P50579 478 aaKnown RBP eCLIP7.47□□□□□ -1.21
CD44-221ENST00000526000 PTPN5P54829 565 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 CBX2Q14781 532 aaPredicted RBP7.47□□□□□ -1.21
CD44-221ENST00000526000 NECTIN1Q15223 517 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 ZNF484Q5JVG2 852 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 RARS2Q5T160 578 aaKnown RBP7.47□□□□□ -1.21
CD44-221ENST00000526000 EFCAB12Q6NXP0 572 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 MIS18BP1Q6P0N0 1132 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 KCNT2Q6UVM3 1135 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 BMP8AQ7Z5Y6 402 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 RASGRP4Q8TDF6 673 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 MRPS27Q92552 414 aaKnown RBP7.47□□□□□ -1.21
CD44-221ENST00000526000 SCLT1Q96NL6 688 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 CASD1Q96PB1 797 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 SH2D3AQ9BRG2 576 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 ESYT1Q9BSJ8 1104 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 ZNF577Q9BSK1 485 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 KCNH6Q9H252 994 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 RNF19AQ9NV58 838 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 GABBR1Q9UBS5 961 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 SAMM50Q9Y512 469 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 PTPRZ1P23471 2315 aaPredicted RBP7.47□□□□□ -1.21
CD44-221ENST00000526000 NFASCO94856 1347 aa7.47□□□□□ -1.21
CD44-221ENST00000526000 IGKV6D-21A0A0A0MT36 114 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 KLF18A0A0U1RQI7 1052 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 ZBTB42B2RXF5 422 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 C2CD4DB7Z1M9 353 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 IPO5O00410 1097 aaKnown RBP7.46□□□□□ -1.22
CD44-221ENST00000526000 FSCN2O14926 492 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 ZBTB43O43298 467 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 CHMP2AO43633 222 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 GFRA3O60609 400 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 C22orf31O95567 290 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 FOSP01100 380 aaPredicted RBP7.46□□□□□ -1.22
CD44-221ENST00000526000 ZSCAN20P17040 1043 aaPredicted RBP7.46□□□□□ -1.22
CD44-221ENST00000526000 CRYBB1P53674 252 aaPredicted RBP7.46□□□□□ -1.22
CD44-221ENST00000526000 FAM189BP81408 668 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 FGD1P98174 961 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 KRT17Q04695 432 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 UBE3AQ05086 875 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 SIGLEC14Q08ET2 396 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 FUT2Q10981 343 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 DSC3Q14574 896 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 ADCK5Q3MIX3 580 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 PRR16Q569H4 304 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 APOA5Q6Q788 366 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 RASEFQ8IZ41 740 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 ABI1Q8IZP0 508 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 TMEM87AQ8NBN3 555 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 KREMEN2Q8NCW0 462 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 HELQQ8TDG4 1101 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 SUSD6Q92537 303 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 LPPQ93052 612 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 ASIC4Q96FT7 647 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 ZNF558Q96NG5 402 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 TMEM117Q9H0C3 514 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 C1orf112Q9NSG2 853 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 FAM217BQ9NTX9 383 aaPredicted RBP7.46□□□□□ -1.22
CD44-221ENST00000526000 TMEM161AQ9NX61 479 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 SPG21Q9NZD8 308 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 LIMD1Q9UGP4 676 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 TCEAL9Q9UHQ7 104 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 CNTNAP5Q8WYK1 1306 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 KDM3AQ9Y4C1 1321 aa7.46□□□□□ -1.22
CD44-221ENST00000526000 TMEM150BA6NC51 233 aa7.45□□□□□ -1.22
CD44-221ENST00000526000 CLASP2O75122 1294 aaKnown RBP7.45□□□□□ -1.22
CD44-221ENST00000526000 BRD1O95696 1058 aa7.45□□□□□ -1.22
CD44-221ENST00000526000 RPLP2P05387 115 aaKnown RBP7.45□□□□□ -1.22
CD44-221ENST00000526000 PSAPP07602 524 aa7.45□□□□□ -1.22
CD44-221ENST00000526000 ATF7P17544 494 aaPredicted RBP7.45□□□□□ -1.22
CD44-221ENST00000526000 LAG3P18627 525 aa7.45□□□□□ -1.22
CD44-221ENST00000526000 SREBF1P36956 1147 aa7.45□□□□□ -1.22
CD44-221ENST00000526000 EXOSC10Q01780 885 aaKnown RBP7.45□□□□□ -1.22
CD44-221ENST00000526000 DRP2Q13474 957 aa7.45□□□□□ -1.22
CD44-221ENST00000526000 PTPN21Q16825 1174 aa7.45□□□□□ -1.22
CD44-221ENST00000526000 CLLU1OSQ5K130 101 aa7.45□□□□□ -1.22
CD44-221ENST00000526000 ODR4Q5SWX8 454 aa7.45□□□□□ -1.22
CD44-221ENST00000526000 DHX32Q7L7V1 743 aaKnown RBP7.45□□□□□ -1.22
CD44-221ENST00000526000 ECHDC2Q86YB7 292 aa7.45□□□□□ -1.22
CD44-221ENST00000526000 PHKBQ93100 1093 aa7.45□□□□□ -1.22
CD44-221ENST00000526000 RIPOR3Q96MK2 946 aa7.45□□□□□ -1.22
CD44-221ENST00000526000 MTA3Q9BTC8 594 aa7.45□□□□□ -1.22
CD44-221ENST00000526000 GBP3Q9H0R5 595 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms