RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 RBCK1Q9BYM8 510 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 CLEC4MQ9H2X3 399 aaPredicted RBP5.7□□□□□ -1.5
CD44-218ENST00000525469 ACBD3Q9H3P7 528 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 CYP4F12Q9HCS2 524 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 XPNPEP3Q9NQH7 507 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 STARD7Q9NQZ5 370 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 LMBRD1Q9NUN5 540 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.7□□□□□ -1.5
CD44-218ENST00000525469 STOML1Q9UBI4 398 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 KCNG1Q9UIX4 513 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 RABGAP1Q9Y3P9 1069 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 MTCH2Q9Y6C9 303 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 PTPRCP08575 1304 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 REV3LO60673 3130 aa5.7□□□□□ -1.5
CD44-218ENST00000525469 ATRNL1Q5VV63 1379 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 A0A1W2PQ45 241 aaPredicted RBP5.69□□□□□ -1.5
CD44-218ENST00000525469 A0A1W2PQY0 241 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 MPHOSPH10O00566 681 aaKnown RBP5.69□□□□□ -1.5
CD44-218ENST00000525469 TLR3O15455 904 aaKnown RBP5.69□□□□□ -1.5
CD44-218ENST00000525469 DCXO43602 365 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 ADAM11O75078 769 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 HOXC6P09630 235 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 FSTP19883 344 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 ITGB7P26010 798 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 CAP2P40123 477 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 RABGGTBP53611 331 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 BACE1P56817 501 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 LRP8Q14114 963 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 ZSCAN26Q16670 478 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 BMP2KLQ5H9B9 411 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 FAM47AQ5JRC9 791 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 RASIP1Q5U651 963 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 KIAA0319Q5VV43 1072 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 PEAR1Q5VY43 1037 aaPredicted RBP5.69□□□□□ -1.5
CD44-218ENST00000525469 OLFML2BQ68BL8 750 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 MCTP1Q6DN14 999 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 TMCO3Q6UWJ1 677 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 ERMP1Q7Z2K6 904 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 ANKRD33Q7Z3H0 272 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 VN1R5Q7Z5H4 357 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 CCNJLQ8IV13 435 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 NPLOC4Q8TAT6 608 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 ALKBH8Q96BT7 664 aaKnown RBP5.69□□□□□ -1.5
CD44-218ENST00000525469 MRRFQ96E11 262 aaKnown RBP5.69□□□□□ -1.5
CD44-218ENST00000525469 MYRFLQ96LU7 910 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 DRC1Q96MC2 740 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 WDR18Q9BV38 432 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 PUS3Q9BZE2 481 aaKnown RBP5.69□□□□□ -1.5
CD44-218ENST00000525469 EHD4Q9H223 541 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 SUDS3Q9H7L9 328 aaPredicted RBP5.69□□□□□ -1.5
CD44-218ENST00000525469 CD320Q9NPF0 282 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 LATS2Q9NRM7 1088 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 KCND1Q9NSA2 647 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 GNL3LQ9NVN8 582 aaKnown RBP5.69□□□□□ -1.5
CD44-218ENST00000525469 KCNK4Q9NYG8 393 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 DCTN4Q9UJW0 460 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 SUFUQ9UMX1 484 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 YBX2Q9Y2T7 364 aaKnown RBP5.69□□□□□ -1.5
CD44-218ENST00000525469 PCDHA11Q9Y5I1 949 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 SLC4A7Q9Y6M7 1214 aa5.69□□□□□ -1.5
CD44-218ENST00000525469 WDFY4Q6ZS81 3184 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 A0A096LPE4 126 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 A0A1W2PP55 124 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 A0A1W2PPZ6 126 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 MEGF11A6BM72 1044 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 RFXAPO00287 272 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 STRNO43815 780 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 SMARCA5O60264 1052 aaPredicted RBP5.68□□□□□ -1.5
CD44-218ENST00000525469 GADD45BO75293 160 aaPredicted RBP5.68□□□□□ -1.5
CD44-218ENST00000525469 PDE8BO95263 885 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 SLU7O95391 586 aaKnown RBP5.68□□□□□ -1.5
CD44-218ENST00000525469 CYP11A1P05108 521 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 POLR3DP05423 398 aaPredicted RBP5.68□□□□□ -1.5
CD44-218ENST00000525469 ASNSP08243 561 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 ESRRAP11474 423 aaPredicted RBP5.68□□□□□ -1.5
CD44-218ENST00000525469 POU3F3P20264 500 aaPredicted RBP5.68□□□□□ -1.5
CD44-218ENST00000525469 PRDX5P30044 214 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 ANAPC15P60006 121 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 GSTM4Q03013 218 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 ICA1Q05084 483 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 PCDH1Q08174 1060 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 OS9Q13438 667 aaPredicted RBP5.68□□□□□ -1.5
CD44-218ENST00000525469 GRB14Q14449 540 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 PDCD2Q16342 344 aaPredicted RBP5.68□□□□□ -1.5
CD44-218ENST00000525469 TMEM67Q5HYA8 995 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 CT47A1Q5JQC4 288 aaPredicted RBP5.68□□□□□ -1.5
CD44-218ENST00000525469 CCDC183Q5T5S1 534 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 ADAMTSL4Q6UY14 1074 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 C16orf59Q7L2K0 433 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 OTOP2Q7RTS6 562 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 KIAA1328Q86T90 577 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 SPATS2Q86XZ4 545 aaKnown RBP5.68□□□□□ -1.5
CD44-218ENST00000525469 DZIP1Q86YF9 867 aaKnown RBP5.68□□□□□ -1.5
CD44-218ENST00000525469 FAM178BQ8IXR5 827 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 ZGPATQ8N5A5 531 aaKnown RBP5.68□□□□□ -1.5
CD44-218ENST00000525469 C8orf58Q8NAV2 365 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 GIMAP7Q8NHV1 300 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 MKL1Q969V6 931 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 RUNDC1Q96C34 613 aa5.68□□□□□ -1.5
CD44-218ENST00000525469 FAM46AQ96IP4 442 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms