RNA–Protein interactions for RNA: ENST00000525375.1

GPATCH4-212, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-212ENST00000525375 DBF4BQ8NFT6 615 aa13.32□□□□□ -0.28
GPATCH4-212ENST00000525375 SNX29Q8TEQ0 813 aa13.32□□□□□ -0.28
GPATCH4-212ENST00000525375 LINC01599Q8WXQ3 324 aa13.32□□□□□ -0.28
GPATCH4-212ENST00000525375 HERVK_113Q902F9 699 aa13.32□□□□□ -0.28
GPATCH4-212ENST00000525375 CEP170P1Q96L14 293 aa13.32□□□□□ -0.28
GPATCH4-212ENST00000525375 PNMA5Q96PV4 448 aa13.32□□□□□ -0.28
GPATCH4-212ENST00000525375 OSMRQ99650 979 aa13.32□□□□□ -0.28
GPATCH4-212ENST00000525375 POLR3CQ9BUI4 534 aaPredicted RBP13.32□□□□□ -0.28
GPATCH4-212ENST00000525375 SUGCTQ9HAC7 445 aa13.32□□□□□ -0.28
GPATCH4-212ENST00000525375 CEP131Q9UPN4 1083 aa13.32□□□□□ -0.28
GPATCH4-212ENST00000525375 TRPV2Q9Y5S1 764 aa13.32□□□□□ -0.28
GPATCH4-212ENST00000525375 A0A1W2PPC1 479 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 FGBP02675 491 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 RPA1P27694 616 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 CD52P31358 61 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 CCT6AP40227 531 aaKnown RBP13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 RARRES1P49788 294 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 TBC1D8BQ0IIM8 1120 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 MAPK8IP2Q13387 824 aaPredicted RBP13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 XKR9Q5GH70 373 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 SPECC1Q5M775 1068 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 DTHD1Q6ZMT9 781 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 USP49Q70CQ1 688 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 NEK9Q8TD19 979 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 TMEM143Q96AN5 459 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 CLIC6Q96NY7 704 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 DHX33Q9H6R0 707 aaKnown RBP13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 TUFT1Q9NNX1 390 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 FBXO2Q9UK22 296 aaPredicted RBP13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 AKT3Q9Y243 479 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 GINS2Q9Y248 185 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 CHD7Q9P2D1 2997 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 COL4A6Q14031 1691 aa13.31□□□□□ -0.28
GPATCH4-212ENST00000525375 ZBBXA8MT70 800 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 E9PMD0 336 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 LAD1O00515 517 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 CSDE1O75534 798 aaKnown RBP13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 BRD1O95696 1058 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 FGFR4P22455 802 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 PBX2P40425 430 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 GPC3P51654 580 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 WDR5P61964 334 aaKnown RBP13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 GRB10Q13322 594 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 EMC2Q15006 297 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 LRIT3Q3SXY7 679 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 CNKSR3Q6P9H4 555 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 FAM228AQ86W67 206 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 RPUSD2Q8IZ73 545 aaKnown RBP13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 TNPO1Q92973 898 aaKnown RBP13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 PLIN2Q99541 437 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 CELF4Q9BZC1 486 aaKnown RBP13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 ADAMTS10Q9H324 1103 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 TMX1Q9H3N1 280 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 ZSCAN16Q9H4T2 348 aaPredicted RBP13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 POLD4Q9HCU8 107 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 GPRC5CQ9NQ84 441 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 TFIP11Q9UBB9 837 aaKnown RBP13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 DAXXQ9UER7 740 aaPredicted RBP13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 NOC2LQ9Y3T9 749 aaKnown RBP13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 EYSQ5T1H1 3165 aa13.3□□□□□ -0.28
GPATCH4-212ENST00000525375 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 MAGEB2O15479 319 aa13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 MGEA5O60502 916 aa13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 USO1O60763 962 aaKnown RBP13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 ARHGEF15O94989 841 aa13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 PFKMP08237 780 aa13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 MYOGP15173 224 aa13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 DDIT3P35638 169 aa13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 NASPP49321 788 aaPredicted RBP13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 RABGGTBP53611 331 aa13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 NLRP11P59045 1033 aaKnown RBP13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 PDIA5Q14554 519 aa13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 ARL6IP4Q66PJ3 421 aaKnown RBP13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 RSPH3Q86UC2 560 aa13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 ASAP3Q8TDY4 903 aa13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 IFIH1Q9BYX4 1025 aaKnown RBP13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 CSRNP2Q9H175 543 aa13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 DDX19AQ9NUU7 478 aaKnown RBP13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 KIAA1024Q9UPX6 916 aa13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 KDM3AQ9Y4C1 1321 aa13.29□□□□□ -0.28
GPATCH4-212ENST00000525375 DKC1O60832 514 aaKnown RBP eCLIP13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 POLGP54098 1239 aaPredicted RBP13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 DNM1Q05193 864 aaKnown RBP13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 ZRSR1Q15695 479 aaKnown RBP13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 TMEM119Q4V9L6 283 aa13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 IER5Q5VY09 327 aa13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 HAUS3Q68CZ6 603 aa13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 TSHZ1Q6ZSZ6 1077 aa13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 MAEAQ7L5Y9 396 aa13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 SPRED2Q7Z698 418 aa13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 RTN4RL1Q86UN2 441 aaPredicted RBP13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 RHPN2Q8IUC4 686 aa13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 LINC00301Q8NCQ3 95 aa13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 ERMNQ8TAM6 284 aa13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 ERVK-5Q9HDB9 667 aa13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 ANKEF1Q9NU02 776 aa13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 SUCLA2Q9P2R7 463 aaPredicted RBP13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 PADI3Q9ULW8 664 aa13.28□□□□□ -0.28
GPATCH4-212ENST00000525375 YBX2Q9Y2T7 364 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms