RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 METTL13Q8N6R0 699 aa27.19■■□□□ 1.94
USP47-205ENST00000525257 CRYGNQ8WXF5 182 aa27.19■■□□□ 1.94
USP47-205ENST00000525257 ATP6V0A4Q9HBG4 840 aa27.19■■□□□ 1.94
USP47-205ENST00000525257 ADAMTS3O15072 1205 aa27.18■■□□□ 1.94
USP47-205ENST00000525257 CYP3A4P08684 503 aa27.18■■□□□ 1.94
USP47-205ENST00000525257 PFKFB3Q16875 520 aaPredicted RBP27.18■■□□□ 1.94
USP47-205ENST00000525257 SKAP1Q86WV1 359 aa27.18■■□□□ 1.94
USP47-205ENST00000525257 VN1R2Q8NFZ6 395 aa27.18■■□□□ 1.94
USP47-205ENST00000525257 BBXQ8WY36 941 aaPredicted RBP27.18■■□□□ 1.94
USP47-205ENST00000525257 TMEM161AQ9NX61 479 aa27.18■■□□□ 1.94
USP47-205ENST00000525257 ADD1P35611 737 aaKnown RBP27.17■■□□□ 1.94
USP47-205ENST00000525257 DUSP6Q16828 381 aa27.17■■□□□ 1.94
USP47-205ENST00000525257 TRIM67Q6ZTA4 783 aa27.17■■□□□ 1.94
USP47-205ENST00000525257 CWH43Q9H720 699 aa27.17■■□□□ 1.94
USP47-205ENST00000525257 TBC1D22BQ9NU19 505 aa27.17■■□□□ 1.94
USP47-205ENST00000525257 TCEAL9Q9UHQ7 104 aa27.17■■□□□ 1.94
USP47-205ENST00000525257 MAFBQ9Y5Q3 323 aaPredicted RBP27.17■■□□□ 1.94
USP47-205ENST00000525257 TMEM221A6NGB7 291 aa27.16■■□□□ 1.94
USP47-205ENST00000525257 M0R296 226 aa27.16■■□□□ 1.94
USP47-205ENST00000525257 GPR32O75388 356 aa27.16■■□□□ 1.94
USP47-205ENST00000525257 CLCN3P51790 818 aa27.16■■□□□ 1.94
USP47-205ENST00000525257 SETQ01105 290 aaPredicted RBP27.16■■□□□ 1.94
USP47-205ENST00000525257 APOBRQ0VD83 1088 aa27.16■■□□□ 1.94
USP47-205ENST00000525257 BMP2KLQ5H9B9 411 aa27.16■■□□□ 1.94
USP47-205ENST00000525257 ZNF746Q6NUN9 644 aaPredicted RBP27.16■■□□□ 1.94
USP47-205ENST00000525257 RPGRIP1Q96KN7 1286 aa27.16■■□□□ 1.94
USP47-205ENST00000525257 PHF7Q9BWX1 381 aaPredicted RBP27.16■■□□□ 1.94
USP47-205ENST00000525257 LAG3P18627 525 aa27.15■■□□□ 1.94
USP47-205ENST00000525257 METAP2P50579 478 aaKnown RBP eCLIP27.15■■□□□ 1.94
USP47-205ENST00000525257 RCAN1P53805 252 aa27.15■■□□□ 1.94
USP47-205ENST00000525257 FGD1P98174 961 aa27.15■■□□□ 1.94
USP47-205ENST00000525257 DSC3Q14574 896 aa27.15■■□□□ 1.94
USP47-205ENST00000525257 CBX2Q14781 532 aaPredicted RBP27.15■■□□□ 1.94
USP47-205ENST00000525257 TSGA10IPQ3SY00 556 aa27.15■■□□□ 1.94
USP47-205ENST00000525257 PLPP4Q5VZY2 271 aa27.15■■□□□ 1.94
USP47-205ENST00000525257 REXO1Q8N1G1 1221 aaKnown RBP27.15■■□□□ 1.94
USP47-205ENST00000525257 CDCA3Q99618 268 aaPredicted RBP27.15■■□□□ 1.94
USP47-205ENST00000525257 GABBR1Q9UBS5 961 aa27.15■■□□□ 1.94
USP47-205ENST00000525257 ESYT2A0FGR8 921 aa27.14■■□□□ 1.94
USP47-205ENST00000525257 FSCN2O14926 492 aa27.14■■□□□ 1.94
USP47-205ENST00000525257 PSAPP07602 524 aa27.14■■□□□ 1.94
USP47-205ENST00000525257 FAM189BP81408 668 aa27.14■■□□□ 1.94
USP47-205ENST00000525257 ZXDAP98168 799 aa27.14■■□□□ 1.94
USP47-205ENST00000525257 KRT32Q14532 448 aa27.14■■□□□ 1.94
USP47-205ENST00000525257 PRR16Q569H4 304 aa27.14■■□□□ 1.94
USP47-205ENST00000525257 SMAP1Q8IYB5 467 aaPredicted RBP27.14■■□□□ 1.94
USP47-205ENST00000525257 PBXIP1Q96AQ6 731 aa27.14■■□□□ 1.94
USP47-205ENST00000525257 ZMYND12Q9H0C1 365 aa27.14■■□□□ 1.94
USP47-205ENST00000525257 ELAC1Q9H777 363 aaKnown RBP27.14■■□□□ 1.94
USP47-205ENST00000525257 C6orf50Q9HD87 102 aa27.14■■□□□ 1.94
USP47-205ENST00000525257 AKT3Q9Y243 479 aa27.14■■□□□ 1.94
USP47-205ENST00000525257 PCDHA10Q9Y5I2 948 aa27.14■■□□□ 1.94
USP47-205ENST00000525257 FSD2A1L4K1 749 aa27.13■■□□□ 1.93
USP47-205ENST00000525257 CPA1P15085 419 aa27.13■■□□□ 1.93
USP47-205ENST00000525257 PDE12Q6L8Q7 609 aaKnown RBP27.13■■□□□ 1.93
USP47-205ENST00000525257 BMP8AQ7Z5Y6 402 aa27.13■■□□□ 1.93
USP47-205ENST00000525257 TMEM117Q9H0C3 514 aa27.13■■□□□ 1.93
USP47-205ENST00000525257 CEP131Q9UPN4 1083 aa27.13■■□□□ 1.93
USP47-205ENST00000525257 SAMM50Q9Y512 469 aa27.13■■□□□ 1.93
USP47-205ENST00000525257 WDR81Q562E7 1941 aa27.13■■□□□ 1.93
USP47-205ENST00000525257 NLRP11P59045 1033 aaKnown RBP27.12■■□□□ 1.93
USP47-205ENST00000525257 MCTP2Q6DN12 878 aa27.12■■□□□ 1.93
USP47-205ENST00000525257 LRRC71Q8N4P6 559 aa27.12■■□□□ 1.93
USP47-205ENST00000525257 RASGRP4Q8TDF6 673 aa27.12■■□□□ 1.93
USP47-205ENST00000525257 CCDC12Q8WUD4 166 aaPredicted RBP27.12■■□□□ 1.93
USP47-205ENST00000525257 SUSD6Q92537 303 aa27.12■■□□□ 1.93
USP47-205ENST00000525257 MRPS27Q92552 414 aaKnown RBP27.12■■□□□ 1.93
USP47-205ENST00000525257 CASD1Q96PB1 797 aa27.12■■□□□ 1.93
USP47-205ENST00000525257 MAP7D2Q96T17 732 aa27.12■■□□□ 1.93
USP47-205ENST00000525257 TCF25Q9BQ70 676 aa27.12■■□□□ 1.93
USP47-205ENST00000525257 ENTPD7Q9NQZ7 604 aa27.12■■□□□ 1.93
USP47-205ENST00000525257 RNF19AQ9NV58 838 aa27.12■■□□□ 1.93
USP47-205ENST00000525257 LZTS1Q9Y250 596 aa27.12■■□□□ 1.93
USP47-205ENST00000525257 CCDC196A0A1B0GTZ2 297 aa27.11■■□□□ 1.93
USP47-205ENST00000525257 MAGEB2O15479 319 aa27.11■■□□□ 1.93
USP47-205ENST00000525257 HMGB1P09429 215 aaKnown RBP27.11■■□□□ 1.93
USP47-205ENST00000525257 ATF7P17544 494 aaPredicted RBP27.11■■□□□ 1.93
USP47-205ENST00000525257 PBX3P40426 434 aa27.11■■□□□ 1.93
USP47-205ENST00000525257 EFCAB12Q6NXP0 572 aa27.11■■□□□ 1.93
USP47-205ENST00000525257 LLGL2Q6P1M3 1020 aa27.11■■□□□ 1.93
USP47-205ENST00000525257 LRRC55Q6ZSA7 311 aa27.11■■□□□ 1.93
USP47-205ENST00000525257 PRSS33Q8NF86 280 aa27.11■■□□□ 1.93
USP47-205ENST00000525257 ZNF668Q96K58 619 aaPredicted RBP27.11■■□□□ 1.93
USP47-205ENST00000525257 FAM167AQ96KS9 214 aa27.11■■□□□ 1.93
USP47-205ENST00000525257 APOL5Q9BWW9 433 aa27.11■■□□□ 1.93
USP47-205ENST00000525257 HOXA2O43364 376 aa27.1■■□□□ 1.93
USP47-205ENST00000525257 SRGAP2BP0DMP2 458 aa27.1■■□□□ 1.93
USP47-205ENST00000525257 TECP42680 631 aa27.1■■□□□ 1.93
USP47-205ENST00000525257 PLCB3Q01970 1234 aa27.1■■□□□ 1.93
USP47-205ENST00000525257 PKN1Q16512 942 aa27.1■■□□□ 1.93
USP47-205ENST00000525257 IER5LQ5T953 404 aa27.1■■□□□ 1.93
USP47-205ENST00000525257 KCNT2Q6UVM3 1135 aa27.1■■□□□ 1.93
USP47-205ENST00000525257 SUGP1Q8IWZ8 645 aaKnown RBP27.1■■□□□ 1.93
USP47-205ENST00000525257 ADAMTS10Q9H324 1103 aa27.1■■□□□ 1.93
USP47-205ENST00000525257 PUF60Q9UHX1 559 aaKnown RBP27.1■■□□□ 1.93
USP47-205ENST00000525257 HIDE1A8MVS5 230 aa27.09■■□□□ 1.93
USP47-205ENST00000525257 WDR64B1ANS9 1081 aa27.09■■□□□ 1.93
USP47-205ENST00000525257 ZSCAN20P17040 1043 aaPredicted RBP27.09■■□□□ 1.93
USP47-205ENST00000525257 TMOD1P28289 359 aa27.09■■□□□ 1.93
USP47-205ENST00000525257 KCNC3Q14003 757 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms