RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 GTF3C2Q8WUA4 911 aaPredicted RBP8.19□□□□□ -1.1
CASP4-204ENST00000524843 BAP1Q92560 729 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 UPF1Q92900 1129 aaKnown RBP eCLIP8.19□□□□□ -1.1
CASP4-204ENST00000524843 ATP6V0A1Q93050 837 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 JAKMIP2Q96AA8 810 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 CCDC42Q96M95 316 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 MPHOSPH6Q99547 160 aaKnown RBP8.19□□□□□ -1.1
CASP4-204ENST00000524843 LSM14BQ9BX40 385 aaKnown RBP8.19□□□□□ -1.1
CASP4-204ENST00000524843 FGFBP2Q9BYJ0 223 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 GBP3Q9H0R5 595 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 DEF6Q9H4E7 631 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 MMRN2Q9H8L6 949 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 NHEJ1Q9H9Q4 299 aaPredicted RBP8.19□□□□□ -1.1
CASP4-204ENST00000524843 C17orf75Q9HAS0 396 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 TBC1D7Q9P0N9 293 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 CDC23Q9UJX2 597 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 EXOC7Q9UPT5 735 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 BOLA1Q9Y3E2 137 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 AFG3L2Q9Y4W6 797 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 PPME1Q9Y570 386 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 BZW2Q9Y6E2 419 aaKnown RBP8.19□□□□□ -1.1
CASP4-204ENST00000524843 ZHX2Q9Y6X8 837 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 ASTN2O75129 1339 aaPredicted RBP8.19□□□□□ -1.1
CASP4-204ENST00000524843 SCN4AP35499 1836 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 KIAA1217Q5T5P2 1943 aa8.19□□□□□ -1.1
CASP4-204ENST00000524843 RASSF10A6NK89 507 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 SPDYE16A6NNV3 312 aaPredicted RBP8.18□□□□□ -1.1
CASP4-204ENST00000524843 RSPH10B2B2RC85 870 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 RBAK-RBAKDNI3L0D1 243 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 K7ENM7 598 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 P4HA2O15460 535 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 GFPT2O94808 682 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 PRPF6O94906 941 aaKnown RBP8.18□□□□□ -1.1
CASP4-204ENST00000524843 SERPING1P05155 500 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 TUBBP07437 444 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 NR3C2P08235 984 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 RSPH10BP0C881 870 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 MYBP10242 640 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 PLS3P13797 630 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 EIF2AK2P19525 551 aaKnown RBP8.18□□□□□ -1.1
CASP4-204ENST00000524843 ICAM3P32942 547 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 PSMC2P35998 433 aaKnown RBP8.18□□□□□ -1.1
CASP4-204ENST00000524843 RARRES1P49788 294 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 CASP5P51878 434 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 KIF11P52732 1056 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 RTP1P59025 263 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 CKAP4Q07065 602 aaKnown RBP8.18□□□□□ -1.1
CASP4-204ENST00000524843 KIF5AQ12840 1032 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 ITGB3BPQ13352 177 aaPredicted RBP8.18□□□□□ -1.1
CASP4-204ENST00000524843 ODR4Q5SWX8 454 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 C10orf76Q5T2E6 689 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 SFMBT2Q5VUG0 894 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 IQCEQ6IPM2 695 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 PADI6Q6TGC4 694 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 GBP6Q6ZN66 633 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 OTUD6AQ7L8S5 288 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 ZNF720Q7Z2F6 126 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 VSIG10LQ86VR7 867 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 FAM186BQ8IYM0 893 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 CCDC155Q8N6L0 562 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 TRIM58Q8NG06 486 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 PIGOQ8TEQ8 1089 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 ZC3H15Q8WU90 426 aaKnown RBP8.18□□□□□ -1.1
CASP4-204ENST00000524843 UBXN4Q92575 508 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 GOLGA1Q92805 767 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 KCNN1Q92952 543 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 DCPSQ96C86 337 aaKnown RBP8.18□□□□□ -1.1
CASP4-204ENST00000524843 RPGRIP1Q96KN7 1286 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 ALS2CR12Q96Q35 445 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 PURBQ96QR8 312 aaKnown RBP8.18□□□□□ -1.1
CASP4-204ENST00000524843 TAAR1Q96RJ0 339 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 WDR24Q96S15 920 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 FIZ1Q96SL8 496 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 STRA6Q9BX79 667 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 GANQ9H2C0 597 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 LZTFL1Q9NQ48 299 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 HOMER2Q9NSB8 354 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 FAM207AQ9NSI2 230 aaPredicted RBP8.18□□□□□ -1.1
CASP4-204ENST00000524843 AGPAT5Q9NUQ2 364 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 FRMD4BQ9Y2L6 1034 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 SNCAIPQ9Y6H5 919 aa8.18□□□□□ -1.1
CASP4-204ENST00000524843 TESPA1A2RU30 521 aaPredicted RBP8.17□□□□□ -1.1
CASP4-204ENST00000524843 UNCXA6NJT0 531 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 LRRC53A6NM62 1247 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 RNF225M0QZC1 329 aaPredicted RBP8.17□□□□□ -1.1
CASP4-204ENST00000524843 CXCL11O14625 94 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 IRF6O14896 467 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 PMM2O15305 246 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 PJA2O43164 708 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 HIP1RO75146 1068 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 PSAPP07602 524 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 CCDC172P0C7W6 258 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 MYCLP12524 364 aaPredicted RBP8.17□□□□□ -1.1
CASP4-204ENST00000524843 YWHABP31946 246 aaKnown RBP8.17□□□□□ -1.1
CASP4-204ENST00000524843 HOXD13P35453 343 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 HERVK_113P62684 666 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 PPATQ06203 517 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 RAD51AP2Q09MP3 1159 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 KCNH2Q12809 1159 aa8.17□□□□□ -1.1
CASP4-204ENST00000524843 MAPK7Q13164 816 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms