RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 COL26A1Q96A83 441 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 VPS39Q96JC1 886 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 NUDT12Q9BQG2 462 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 ACAT2Q9BWD1 397 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 OXCT2Q9BYC2 517 aaPredicted RBP7.41□□□□□ -1.22
LIN7C-202ENST00000524596 ATP13A3Q9H7F0 1226 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 FBXO40Q9UH90 709 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 PLCL2Q9UPR0 1127 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 A0A0G2JPF8 293 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 HNRNPCL3B7ZW38 293 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 TCEA3O75764 348 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 ABL1P00519 1130 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 HNRNPCL4P0DMR1 293 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 CDC25CP30307 473 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 RCAN1P53805 252 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 PTPN5P54829 565 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 ZMYND11Q15326 602 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 TAF1CQ15572 869 aaPredicted RBP7.41□□□□□ -1.22
LIN7C-202ENST00000524596 CFAP221Q4G0U5 840 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 METTL11BQ5VVY1 283 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 ZNF530Q6P9A1 599 aaPredicted RBP7.41□□□□□ -1.22
LIN7C-202ENST00000524596 HACE1Q8IYU2 909 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 SPICE1Q8N0Z3 855 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 CHMP7Q8WUX9 453 aaPredicted RBP7.41□□□□□ -1.22
LIN7C-202ENST00000524596 FRMD6Q96NE9 622 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 BEGAINQ9BUH8 593 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 MTMR12Q9C0I1 747 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 ZCWPW1Q9H0M4 648 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 PIH1D1Q9NWS0 290 aaKnown RBP7.41□□□□□ -1.22
LIN7C-202ENST00000524596 INPP5FQ9Y2H2 1132 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 ZNF510Q9Y2H8 683 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 GIT1Q9Y2X7 761 aa7.41□□□□□ -1.22
LIN7C-202ENST00000524596 CCNB3Q8WWL7 1395 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 ZSCAN5BA6NJL1 495 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 A8MVJ9 347 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 MEN1O00255 615 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 SPTLC1O15269 473 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 ATP9BO43861 1147 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 CRYZL1O95825 349 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 ATP6V1B1P15313 513 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 CSF2RAP15509 400 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 PUDPQ08623 228 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 VAC14Q08AM6 782 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 STX5Q13190 355 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 NONOQ15233 471 aaKnown RBP eCLIP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 MINDY4Q4G0A6 757 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 AARS2Q5JTZ9 985 aaKnown RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 SPDYCQ5MJ68 293 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 PPP1R15BQ5SWA1 713 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 CDCA2Q69YH5 1023 aaPredicted RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 C14orf80Q86SX3 495 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 DIS3L2Q8IYB7 885 aaKnown RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 RILPL2Q969X0 211 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 CAPZA3Q96KX2 299 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 SRPK1Q96SB4 655 aaKnown RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 DDX50Q9BQ39 737 aaKnown RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 CCDC90BQ9GZT6 254 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 NT5C3AQ9H0P0 336 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 CD209Q9NNX6 404 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 RPRD1BQ9NQG5 326 aaKnown RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 PLSCR2Q9NRY7 297 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 NDFIP2Q9NV92 336 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 C9orf78Q9NZ63 289 aaPredicted RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 FAM8A1Q9UBU6 413 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 CLEC4AQ9UMR7 237 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 FHAD1B1AJZ9 1412 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 PRSS47A8MTI9 375 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 F5H423 210 aaPredicted RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 K7ENM7 598 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 POLR2DO15514 142 aaKnown RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 RIPK2O43353 540 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 SMNDC1O75940 238 aaKnown RBP eCLIP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 PDGFRBP09619 1106 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 PRG2P13727 222 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 ACADSP16219 412 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 ME1P48163 572 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 MRPS9P82933 396 aaKnown RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 ATP8B2P98198 1209 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 CD83Q01151 205 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 ZMYM1Q5SVZ6 1142 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 HYIQ5T013 277 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 ZSCAN25Q6NSZ9 544 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 ZNF746Q6NUN9 644 aaPredicted RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 DUS1LQ6P1R4 473 aaKnown RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 TRIM67Q6ZTA4 783 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 FAM20CQ8IXL6 584 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 XXYLT1Q8NBI6 393 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 ICA1LQ8NDH6 482 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 PNPT1Q8TCS8 783 aaKnown RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 PDCD6IPQ8WUM4 868 aaKnown RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 NELFBQ8WX92 580 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 TBC1D20Q96BZ9 403 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 CCDC43Q96MW1 224 aaKnown RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 KLHL4Q9C0H6 718 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 SYBUQ9NX95 663 aa7.4□□□□□ -1.22
LIN7C-202ENST00000524596 NOB1Q9ULX3 412 aaKnown RBP7.4□□□□□ -1.22
LIN7C-202ENST00000524596 IKBKBO14920 756 aa7.4□□□□□ -1.23
LIN7C-202ENST00000524596 ALDH1L1O75891 902 aa7.4□□□□□ -1.23
LIN7C-202ENST00000524596 F13A1P00488 732 aa7.4□□□□□ -1.23
LIN7C-202ENST00000524596 GJA1P17302 382 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms