RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 NIPA1Q7RTP0 329 aa17.37■□□□□ 0.37
TRAPPC9-213ENST00000522504 TRMT1LQ7Z2T5 733 aaKnown RBP17.37■□□□□ 0.37
TRAPPC9-213ENST00000522504 RASEFQ8IZ41 740 aa17.37■□□□□ 0.37
TRAPPC9-213ENST00000522504 PBXIP1Q96AQ6 731 aa17.37■□□□□ 0.37
TRAPPC9-213ENST00000522504 NEK1Q96PY6 1258 aa17.37■□□□□ 0.37
TRAPPC9-213ENST00000522504 PHF7Q9BWX1 381 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC9-213ENST00000522504 C1orf112Q9NSG2 853 aa17.37■□□□□ 0.37
TRAPPC9-213ENST00000522504 FNDC1Q4ZHG4 1894 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC9-213ENST00000522504 IPO5O00410 1097 aaKnown RBP17.36■□□□□ 0.37
TRAPPC9-213ENST00000522504 ZBTB43O43298 467 aa17.36■□□□□ 0.37
TRAPPC9-213ENST00000522504 CRYBB1P53674 252 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC9-213ENST00000522504 MIS18BP1Q6P0N0 1132 aa17.36■□□□□ 0.37
TRAPPC9-213ENST00000522504 TEX2Q8IWB9 1127 aa17.36■□□□□ 0.37
TRAPPC9-213ENST00000522504 THNSL1Q8IYQ7 743 aa17.36■□□□□ 0.37
TRAPPC9-213ENST00000522504 S1PR5Q9H228 398 aa17.36■□□□□ 0.37
TRAPPC9-213ENST00000522504 MAFBQ9Y5Q3 323 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC9-213ENST00000522504 COL1A2P08123 1366 aa17.36■□□□□ 0.37
TRAPPC9-213ENST00000522504 CACNA1HO95180 2353 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 GOLGA8AA7E2F4 631 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 GOLGA8BA8MQT2 603 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 HIDE1A8MVS5 230 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 GPR182O15218 404 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 PBX3P40426 434 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 PLPP4Q5VZY2 271 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 DHX32Q7L7V1 743 aaKnown RBP17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 METTL13Q8N6R0 699 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 CASD1Q96PB1 797 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 APOL5Q9BWW9 433 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 ATP6V0A4Q9HBG4 840 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 AAASQ9NRG9 546 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 TMEM161AQ9NX61 479 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 CDH22Q9UJ99 828 aa17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 ZFHX2Q9C0A1 2572 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC9-213ENST00000522504 KLF18A0A0U1RQI7 1052 aa17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 hCG_1984214I3L0E3 225 aa17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 CYP3A4P08684 503 aa17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 ADD1P35611 737 aaKnown RBP17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 CLCN3P51790 818 aa17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 TCF15Q12870 199 aa17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 SYCE2Q6PIF2 218 aa17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 TMEM184AQ6ZMB5 413 aa17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 CKAP2LQ8IYA6 745 aa17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 ZNF713Q8N859 430 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 ASIC4Q96FT7 647 aa17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 ZNF668Q96K58 619 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 ZNF577Q9BSK1 485 aa17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 ADAMTS10Q9H324 1103 aa17.34■□□□□ 0.37
TRAPPC9-213ENST00000522504 WDR87Q6ZQQ6 2873 aa17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 EDIL3O43854 480 aa17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 ATF7P17544 494 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 VCPP55072 806 aaKnown RBP17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 PLCB3Q01970 1234 aa17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 PFKFB3Q16875 520 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 ANKRD54Q6NXT1 300 aa17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 LLGL2Q6P1M3 1020 aa17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 LINC01465Q8N7H1 131 aa17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 BBXQ8WY36 941 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 MRPS27Q92552 414 aaKnown RBP17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 CDCA3Q99618 268 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 TCF25Q9BQ70 676 aa17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 ELAC1Q9H777 363 aaKnown RBP17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 EVPLQ92817 2033 aa17.33■□□□□ 0.36
TRAPPC9-213ENST00000522504 CPA1P15085 419 aa17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 LAG3P18627 525 aa17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 SP100P23497 879 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 TECP42680 631 aa17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 NLRP11P59045 1033 aaKnown RBP17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 PKN1Q16512 942 aa17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 ZNF746Q6NUN9 644 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 FAM43BQ6ZT52 329 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 LRRC71Q8N4P6 559 aa17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 FBXL6Q8N531 539 aa17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 LENG9Q96B70 501 aa17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 TMEM117Q9H0C3 514 aa17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 GLT8D2Q9H1C3 349 aa17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 GABBR1Q9UBS5 961 aa17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 LZTS1Q9Y250 596 aa17.32■□□□□ 0.36
TRAPPC9-213ENST00000522504 ZNF862O60290 1169 aa17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 SIGLEC14Q08ET2 396 aa17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 TSGA10IPQ3SY00 556 aa17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 PRR16Q569H4 304 aa17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 CLLU1OSQ5K130 101 aa17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 ODR4Q5SWX8 454 aa17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 RNF20Q5VTR2 975 aa17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 PDE12Q6L8Q7 609 aaKnown RBP17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 KCNT2Q6UVM3 1135 aa17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 RASGRP4Q8TDF6 673 aa17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 ZMYND12Q9H0C1 365 aa17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 ENTPD7Q9NQZ7 604 aa17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 TBC1D22BQ9NU19 505 aa17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 PCDHA10Q9Y5I2 948 aa17.31■□□□□ 0.36
TRAPPC9-213ENST00000522504 PDGFBP01127 241 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC9-213ENST00000522504 PSAPP07602 524 aa17.3■□□□□ 0.36
TRAPPC9-213ENST00000522504 FGFR4P22455 802 aa17.3■□□□□ 0.36
TRAPPC9-213ENST00000522504 PTPN5P54829 565 aa17.3■□□□□ 0.36
TRAPPC9-213ENST00000522504 UGCGQ16739 394 aa17.3■□□□□ 0.36
TRAPPC9-213ENST00000522504 PTPN21Q16825 1174 aa17.3■□□□□ 0.36
TRAPPC9-213ENST00000522504 EFCAB12Q6NXP0 572 aa17.3■□□□□ 0.36
TRAPPC9-213ENST00000522504 ECHDC2Q86YB7 292 aa17.3■□□□□ 0.36
TRAPPC9-213ENST00000522504 SUGP1Q8IWZ8 645 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms