RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ADAM2Q99965 735 aa23.34■■□□□ 1.33
SDCBP-209ENST00000522243 UBE2ZQ9H832 354 aaPredicted RBP23.34■■□□□ 1.33
SDCBP-209ENST00000522243 ORC3Q9UBD5 711 aaPredicted RBP23.34■■□□□ 1.33
SDCBP-209ENST00000522243 RWDD3Q9Y3V2 267 aa23.34■■□□□ 1.33
SDCBP-209ENST00000522243 DENND3A2RUS2 1198 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 C5orf67F2Z3F1 127 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 GPR182O15218 404 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 GRM6O15303 877 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 SLC37A4O43826 429 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 LARGE1O95461 756 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 XBP1P17861 261 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 SARSP49591 514 aaKnown RBP23.33■■□□□ 1.33
SDCBP-209ENST00000522243 NLRP11P59045 1033 aaKnown RBP23.33■■□□□ 1.33
SDCBP-209ENST00000522243 ANKRD1Q15327 319 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 TIGD5Q53EQ6 642 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 TCEAL5Q5H9L2 206 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 ODR4Q5SWX8 454 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 MOXD1Q6UVY6 613 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 CMTR2Q8IYT2 770 aaKnown RBP23.33■■□□□ 1.33
SDCBP-209ENST00000522243 LINC01465Q8N7H1 131 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 ETNPPLQ8TBG4 499 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 CLP1Q92989 425 aaKnown RBP23.33■■□□□ 1.33
SDCBP-209ENST00000522243 MAP7D2Q96T17 732 aa23.33■■□□□ 1.33
SDCBP-209ENST00000522243 VCANP13611 3396 aa23.32■■□□□ 1.32
SDCBP-209ENST00000522243 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.32■■□□□ 1.32
SDCBP-209ENST00000522243 TMEM150BA6NC51 233 aa23.32■■□□□ 1.32
SDCBP-209ENST00000522243 KCNA5P22460 613 aa23.32■■□□□ 1.32
SDCBP-209ENST00000522243 ME3Q16798 604 aa23.32■■□□□ 1.32
SDCBP-209ENST00000522243 B3GNT9Q6UX72 402 aa23.32■■□□□ 1.32
SDCBP-209ENST00000522243 PIK3AP1Q6ZUJ8 805 aa23.32■■□□□ 1.32
SDCBP-209ENST00000522243 SH2D3AQ9BRG2 576 aa23.32■■□□□ 1.32
SDCBP-209ENST00000522243 C11orf84Q9BUA3 381 aaPredicted RBP23.32■■□□□ 1.32
SDCBP-209ENST00000522243 SEPT9Q9UHD8 586 aaPredicted RBP23.32■■□□□ 1.32
SDCBP-209ENST00000522243 PCDHB7Q9Y5E2 793 aa23.32■■□□□ 1.32
SDCBP-209ENST00000522243 SEC24BO95487 1268 aa23.31■■□□□ 1.32
SDCBP-209ENST00000522243 TMOD1P28289 359 aa23.31■■□□□ 1.32
SDCBP-209ENST00000522243 TBC1D8BQ0IIM8 1120 aa23.31■■□□□ 1.32
SDCBP-209ENST00000522243 MTERF2Q49AM1 385 aa23.31■■□□□ 1.32
SDCBP-209ENST00000522243 EP400NLQ6ZTU2 488 aa23.31■■□□□ 1.32
SDCBP-209ENST00000522243 NEK8Q86SG6 692 aa23.31■■□□□ 1.32
SDCBP-209ENST00000522243 RDM1Q8NG50 284 aa23.31■■□□□ 1.32
SDCBP-209ENST00000522243 NSUN3Q9H649 340 aaKnown RBP23.31■■□□□ 1.32
SDCBP-209ENST00000522243 ALG13Q9NP73 1137 aaKnown RBP23.31■■□□□ 1.32
SDCBP-209ENST00000522243 RGS18Q9NS28 235 aa23.31■■□□□ 1.32
SDCBP-209ENST00000522243 FNDC1Q4ZHG4 1894 aaPredicted RBP23.3■■□□□ 1.32
SDCBP-209ENST00000522243 FDPSP14324 419 aaKnown RBP23.3■■□□□ 1.32
SDCBP-209ENST00000522243 EARS2Q5JPH6 523 aaKnown RBP23.3■■□□□ 1.32
SDCBP-209ENST00000522243 ADAMTS10Q9H324 1103 aa23.3■■□□□ 1.32
SDCBP-209ENST00000522243 C1orf112Q9NSG2 853 aa23.3■■□□□ 1.32
SDCBP-209ENST00000522243 C9IYK1 514 aa23.29■■□□□ 1.32
SDCBP-209ENST00000522243 EML1O00423 815 aa23.29■■□□□ 1.32
SDCBP-209ENST00000522243 CCNT1O60563 726 aaKnown RBP23.29■■□□□ 1.32
SDCBP-209ENST00000522243 STBD1O95210 358 aa23.29■■□□□ 1.32
SDCBP-209ENST00000522243 NEK4P51957 841 aa23.29■■□□□ 1.32
SDCBP-209ENST00000522243 FOSBP53539 338 aa23.29■■□□□ 1.32
SDCBP-209ENST00000522243 DRP2Q13474 957 aa23.29■■□□□ 1.32
SDCBP-209ENST00000522243 TARBP2Q15633 366 aaKnown RBP23.29■■□□□ 1.32
SDCBP-209ENST00000522243 FAM102BQ5T8I3 360 aa23.29■■□□□ 1.32
SDCBP-209ENST00000522243 SLC24A5Q71RS6 500 aa23.29■■□□□ 1.32
SDCBP-209ENST00000522243 PLVAPQ9BX97 442 aa23.29■■□□□ 1.32
SDCBP-209ENST00000522243 LMAN2LQ9H0V9 348 aa23.29■■□□□ 1.32
SDCBP-209ENST00000522243 PLAGL2Q9UPG8 496 aa23.29■■□□□ 1.32
SDCBP-209ENST00000522243 FAM205CA6NFA0 338 aa23.28■■□□□ 1.32
SDCBP-209ENST00000522243 DDX11L8A8MPP1 907 aa23.28■■□□□ 1.32
SDCBP-209ENST00000522243 GPC3P51654 580 aa23.28■■□□□ 1.32
SDCBP-209ENST00000522243 DSC3Q14574 896 aa23.28■■□□□ 1.32
SDCBP-209ENST00000522243 XKR3Q5GH77 459 aa23.28■■□□□ 1.32
SDCBP-209ENST00000522243 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.28■■□□□ 1.32
SDCBP-209ENST00000522243 WASF1Q92558 559 aa23.28■■□□□ 1.32
SDCBP-209ENST00000522243 GTF3C6Q969F1 213 aa23.28■■□□□ 1.32
SDCBP-209ENST00000522243 SCLT1Q96NL6 688 aa23.28■■□□□ 1.32
SDCBP-209ENST00000522243 NIFKQ9BYG3 293 aaKnown RBP23.28■■□□□ 1.32
SDCBP-209ENST00000522243 TBKBP1A7MCY6 615 aa23.27■■□□□ 1.32
SDCBP-209ENST00000522243 H3BQ06 376 aaPredicted RBP23.27■■□□□ 1.32
SDCBP-209ENST00000522243 FGFR4P22455 802 aa23.27■■□□□ 1.32
SDCBP-209ENST00000522243 EIF4BP23588 611 aaKnown RBP23.27■■□□□ 1.32
SDCBP-209ENST00000522243 NR5A1Q13285 461 aa23.27■■□□□ 1.32
SDCBP-209ENST00000522243 LEXMQ3ZCV2 418 aa23.27■■□□□ 1.32
SDCBP-209ENST00000522243 KLHL23Q8NBE8 558 aa23.27■■□□□ 1.32
SDCBP-209ENST00000522243 KCNMB3Q9NPA1 279 aa23.27■■□□□ 1.32
SDCBP-209ENST00000522243 HCSTQ9UBK5 93 aa23.27■■□□□ 1.32
SDCBP-209ENST00000522243 SPTBN5Q9NRC6 3674 aaKnown RBP23.27■■□□□ 1.32
SDCBP-209ENST00000522243 PLXNA4Q9HCM2 1894 aa23.26■■□□□ 1.31
SDCBP-209ENST00000522243 MARCH6O60337 910 aa23.26■■□□□ 1.31
SDCBP-209ENST00000522243 ITGB1P05556 798 aa23.26■■□□□ 1.31
SDCBP-209ENST00000522243 FGFR1P11362 822 aa23.26■■□□□ 1.31
SDCBP-209ENST00000522243 GCFC2P16383 781 aaKnown RBP23.26■■□□□ 1.31
SDCBP-209ENST00000522243 KRT2P35908 639 aa23.26■■□□□ 1.31
SDCBP-209ENST00000522243 CAMK1Q14012 370 aa23.26■■□□□ 1.31
SDCBP-209ENST00000522243 SPOUT1Q5T280 376 aaKnown RBP23.26■■□□□ 1.31
SDCBP-209ENST00000522243 PPP4R3AQ6IN85 833 aa23.26■■□□□ 1.31
SDCBP-209ENST00000522243 NSUN7Q8NE18 718 aaKnown RBP23.26■■□□□ 1.31
SDCBP-209ENST00000522243 NLRP7Q8WX94 980 aa23.26■■□□□ 1.31
SDCBP-209ENST00000522243 P2RX5Q93086 422 aa23.26■■□□□ 1.31
SDCBP-209ENST00000522243 CEP89Q96ST8 783 aa23.26■■□□□ 1.31
SDCBP-209ENST00000522243 CLDND1Q9NY35 253 aa23.26■■□□□ 1.31
SDCBP-209ENST00000522243 VAV3Q9UKW4 847 aa23.26■■□□□ 1.31
SDCBP-209ENST00000522243 MYO7AQ13402 2215 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 JAK2O60674 1132 aa23.25■■□□□ 1.31
SDCBP-209ENST00000522243 CSDE1O75534 798 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms