RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SEL1LQ9UBV2 794 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 DACH1Q9UI36 760 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 PTCH2Q9Y6C5 1203 aa14.5□□□□□ -0.09
CPNE3-205ENST00000522240 COL1A2P08123 1366 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 A0A087WWV3 80 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 HBP1O60381 514 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 MSCO60682 206 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 USO1O60763 962 aaKnown RBP14.49□□□□□ -0.09
CPNE3-205ENST00000522240 DGAT1O75907 488 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 F2P00734 622 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 INHAP05111 366 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 RARBP10826 455 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 IDEP14735 1019 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 GAP43P17677 238 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 RFC5P40937 340 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 PPP1R2P41236 205 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 ZNF131P52739 623 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 COASYQ13057 564 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 PSMD2Q13200 908 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 PLCB4Q15147 1175 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 TARBP2Q15633 366 aaKnown RBP14.49□□□□□ -0.09
CPNE3-205ENST00000522240 DPCR1Q3MIW9 517 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 ANO6Q4KMQ2 910 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 COBLL1Q53SF7 1204 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 CT47A1Q5JQC4 288 aaPredicted RBP14.49□□□□□ -0.09
CPNE3-205ENST00000522240 ZNF658Q5TYW1 1059 aaPredicted RBP14.49□□□□□ -0.09
CPNE3-205ENST00000522240 MLKLQ8NB16 471 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 MCPH1Q8NEM0 835 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 LENG1Q96BZ8 264 aaPredicted RBP14.49□□□□□ -0.09
CPNE3-205ENST00000522240 CEP170P1Q96L14 293 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 C16orf70Q9BSU1 422 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 SPC25Q9HBM1 224 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 COL4A3BPQ9Y5P4 624 aa14.49□□□□□ -0.09
CPNE3-205ENST00000522240 SYNRGQ9UMZ2 1314 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 TMEM150BA6NC51 233 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 GAS2O43903 313 aaKnown RBP14.48□□□□□ -0.09
CPNE3-205ENST00000522240 KPNA6O60684 536 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 BMP6P22004 513 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 CST5P28325 142 aaPredicted RBP14.48□□□□□ -0.09
CPNE3-205ENST00000522240 CCND3P30281 292 aaPredicted RBP14.48□□□□□ -0.09
CPNE3-205ENST00000522240 NPEPPSP55786 919 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 FSCN1Q16658 493 aaKnown RBP14.48□□□□□ -0.09
CPNE3-205ENST00000522240 FAM26FQ5R3K3 315 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 EXOC8Q8IYI6 725 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 DRC1Q96MC2 740 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 CEP89Q96ST8 783 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 BPIFA3Q9BQP9 254 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 NAT10Q9H0A0 1025 aaKnown RBP14.48□□□□□ -0.09
CPNE3-205ENST00000522240 DNAJC25Q9H1X3 360 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 DHX33Q9H6R0 707 aaKnown RBP14.48□□□□□ -0.09
CPNE3-205ENST00000522240 ATP6V0A4Q9HBG4 840 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 OLFML3Q9NRN5 406 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 PANK4Q9NVE7 773 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 PTPN22Q9Y2R2 807 aa14.48□□□□□ -0.09
CPNE3-205ENST00000522240 NPHP3-ACAD11A0A0J9YXS1 232 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 H3BRB1 525 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 HIP1RO75146 1068 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 FAM13AO94988 1023 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 ZNF286BP0CG31 522 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 MARK3P27448 753 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 CNGA1P29973 690 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 MAPK7Q13164 816 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 MTERF2Q49AM1 385 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 C11orf57Q6ZUT1 292 aaPredicted RBP14.47□□□□□ -0.09
CPNE3-205ENST00000522240 GAS2L3Q86XJ1 694 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 FAM200AQ8TCP9 573 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 JPH2Q9BR39 696 aaPredicted RBP14.47□□□□□ -0.09
CPNE3-205ENST00000522240 KATNAL1Q9BW62 490 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 TUT1Q9H6E5 874 aaKnown RBP14.47□□□□□ -0.09
CPNE3-205ENST00000522240 PARVGQ9HBI0 331 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 PDLIM7Q9NR12 457 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 DDX20Q9UHI6 824 aaKnown RBP14.47□□□□□ -0.09
CPNE3-205ENST00000522240 TRPC6Q9Y210 931 aa14.47□□□□□ -0.09
CPNE3-205ENST00000522240 MYH11P35749 1972 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 RSPH10B2B2RC85 870 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 ZEB2O60315 1214 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 ADAMTS4O75173 837 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 RSPH10BP0C881 870 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 POLGP54098 1239 aaPredicted RBP14.46□□□□□ -0.09
CPNE3-205ENST00000522240 RTP1P59025 263 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 RAD51AP2Q09MP3 1159 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 STIM1Q13586 685 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 EMC2Q15006 297 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 ZNF484Q5JVG2 852 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 ISM2Q6H9L7 571 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 SFR1Q86XK3 245 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 DAW1Q8N136 415 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 SLC7A3Q8WY07 619 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 KIFAP3Q92845 792 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 C17orf75Q9HAS0 396 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 HMX1Q9NP08 348 aaPredicted RBP14.46□□□□□ -0.09
CPNE3-205ENST00000522240 XPNPEP3Q9NQH7 507 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 XPNPEP1Q9NQW7 623 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 LARSQ9P2J5 1176 aaKnown RBP14.46□□□□□ -0.09
CPNE3-205ENST00000522240 GDAQ9Y2T3 454 aa14.46□□□□□ -0.09
CPNE3-205ENST00000522240 UBE4BO95155 1302 aa14.45□□□□□ -0.1
CPNE3-205ENST00000522240 HTTP42858 3142 aa14.45□□□□□ -0.1
CPNE3-205ENST00000522240 FSD2A1L4K1 749 aa14.45□□□□□ -0.1
CPNE3-205ENST00000522240 ZBTB42B2RXF5 422 aa14.45□□□□□ -0.1
CPNE3-205ENST00000522240 HAS3O00219 553 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms